FFCP PHASE1:Mm9::chr6:31513888..31513910,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=27205|HGNC=|MCL_coexpression_id=531|UniProt=Q8VIQ4,Q791G4,Q9R0M4|association_with_transcript=26bp_to_ENSMUST00000048101,NM_013723,uc009bgh.2_5end|description=CAGE_peak_2_at_Podxl_5end|id=chr6:31513888..31513910,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!1.72e-10!85;UBERON:0002048!7.09e-09!14;UBERON:0000117!7.09e-09!14;UBERON:0000171!7.09e-09!14;UBERON:0000170!7.09e-09!14;UBERON:0005597!7.09e-09!14;UBERON:0000118!7.09e-09!14;UBERON:0005153!1.38e-08!17;UBERON:0000464!1.90e-08!57;UBERON:0009569!2.03e-08!66;UBERON:0000468!3.37e-08!333;UBERON:0000466!5.82e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.67e-11,79;UBERON:0002048,6.14e-09,14;UBERON:0000117,6.14e-09,14;UBERON:0000171,6.14e-09,14;UBERON:0000170,6.14e-09,14;UBERON:0005597,6.14e-09,14;UBERON:0000118,6.14e-09,14;UBERON:0005153,1.20e-08,17;UBERON:0009569,4.38e-08,66;UBERON:0006554,9.01e-08,18;UBERON:0001008,3.30e-07,19;UBERON:0002100,4.25e-07,90|phase1_expression=0.80074423552397,0.348975407639361,0,0,0,0.33575854382378,0,0,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0,17.3217076144145,9.11138703254217,14.6907994406911,0.157731082679119,0.137114433605739,0.42438965179803,16.7535281597607,0,0,0.319984845586813,0,0.57423196411502,0,0.646413698057667,0.380046838912748,0.252030129759931,0.221730510655305,9.52546010189447,10.4561013889377,31.6963362030877,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0,0,18.9681886050988,7.24964403023757,8.36048566019419,7.13930750289349,35.9381410912429,0.167782606057736,0,0,0.257259436035947,1.14613375975503,0,5.05791152148994,2.11596391708813,10.775133859605,1.35537812827653,0.889294796111139,0,0,0,2.99600110518405,6.53171119046643,6.11768712620018,3.64516033495565,5.25812403378455,4.57041575046086,6.18431914664518,4.65465037016825,5.75072826109418,7.35375029288017,2.20231761998777,7.02280359468532,6.60508093001847,8.5726087024626,7.593474419,9.89735404057844,8.93385596804419,2.8138130501584,6.87592114995646,5.00868595305235,5.41012387036591,4.28718725398191,15.4481434399695,9.52201657345497,52.7553369437054,10.3250865237766,0.679971333707751,1.61910957491345,1.29955283489534,0.896053774194671,10.2524426696179,0.170430322578058,0,0,1.83096445709685,0,0,0,2.16491041011214,0.506719730950197,0.505524445014783,7.53613606145796,10.8753911131812,22.1178787206589,14.9197381018877,15.8322048722313,16.3737003051802,8.59119051149949,18.34383831317,18.0959891514733,429.872048890076,43.8136051467332,3.5384422077995,9.05894359705491,8.61281921995535,10.6672555689749,9.31958806090611,5.5628351432194,3.56059401582874,6.38642638021478,0,0,0,5.54225365797844,11.8950156732843,2.51308704225729,9.21268897019065,4.85859368927628,9.14267396062064,4.86723789203273,35.3382592560598,8.21086006026614,6.82351447770922,18.0979996062368,4.29397461776922,5.0578462975364,7.92273371143537,9.64510834148576,12.7228253412983,15.8861013153214,15.9292931751539,28.4573707812917,5.6047678162539,6.05139456537022,5.63043597324636,4.82230611340665,2.78047249225598,6.96504333044333,8.64284972913362,39.2097505632432,0,0,0,27.3406019746863,19.7001890384121,14.0448407939592,22.490749880595,15.9379027715397,16.1980468531747,16.9749779667798,18.2425912951741,23.8201298429026,16.6205448412615,32.6693253517399,50.9112123947974,31.8715972587224,38.6408202912249,40.6645448843926,4.20579897128254,9.36431972651488,0.660837565967596,4.7601101999438,29.4337785738623,28.3328739669735,31.4436605625908,32.6727309889815,31.3553041821267,29.2947464213341,3.32170343081158,31.1281024428381,13.3207660664143,18.7019083718682,16.7669114922443,5.39291645192533,6.70027954611552,6.17337947088538,16.311439481965,21.8214659084582,37.1935527721165,35.4353310450847,40.923974792369,50.0769754016874,62.9835909757603,59.3392794878001,54.0075623774329,45.6569506510662,5.63259991465583,29.8652739231808,26.142346350056,19.1132795527126,12.7801876474757,8.20002343158217,8.91190481234969,13.5217184601881,3.40483976227574,7.68771956926628,4.31304619582064,9.67566463938109,5.30464044294753,7.07220858251913,6.81710171383266,5.78932225636041,104.385552444132,15.5382957651798,27.8670109715864,20.708900464573,25.5812370634467,44.2216519646394,75.6978778017524,56.1984905830461,63.2116927865826,64.8891540670911,66.8115480674871,74.2300815662293,68.7286227826264,83.4625068015322,0,0,10.3270497333998,14.0727740615414,7.22477654945064,6.68106613575558,0,14.3908428506493,0.315508219416257,0,0,0.238968797952552,0.445597348164788,0,0,0,0,5.46246237917072,19.5877317587411,53.2416154965093,66.1321054975519,26.8901300445233,14.6019652173959,32.0470439724576,13.302236506449,16.0314317792513,27.4630760379119,20.2907197642992,21.7079766261306,22.9026249570828,17.1118741624666,15.8018378967908,20.0295356292498,21.6584640821192,7.14923172082955,8.8229936075342,13.8413791647547,11.1455258216428,14.3645589250242,1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| ||
|EntrezGene=27205 | |||
|HGNC= | |||
|MCL_coexpression_id=531 | |||
|UniProt=Q8VIQ4,Q791G4,Q9R0M4 | |||
|association_with_transcript=26bp_to_ENSMUST00000048101,NM_013723,uc009bgh.2_5end | |||
|description=CAGE_peak_2_at_Podxl_5end | |||
|id=chr6:31513888..31513910,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!1.72e-10!85;UBERON:0002048!7.09e-09!14;UBERON:0000117!7.09e-09!14;UBERON:0000171!7.09e-09!14;UBERON:0000170!7.09e-09!14;UBERON:0005597!7.09e-09!14;UBERON:0000118!7.09e-09!14;UBERON:0005153!1.38e-08!17;UBERON:0000464!1.90e-08!57;UBERON:0009569!2.03e-08!66;UBERON:0000468!3.37e-08!333;UBERON:0000466!5.82e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.67e-11,79;UBERON:0002048,6.14e-09,14;UBERON:0000117,6.14e-09,14;UBERON:0000171,6.14e-09,14;UBERON:0000170,6.14e-09,14;UBERON:0005597,6.14e-09,14;UBERON:0000118,6.14e-09,14;UBERON:0005153,1.20e-08,17;UBERON:0009569,4.38e-08,66;UBERON:0006554,9.01e-08,18;UBERON:0001008,3.30e-07,19;UBERON:0002100,4.25e-07,90 | |||
|phase1_expression=0.80074423552397,0.348975407639361,0,0,0,0.33575854382378,0,0,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0,17.3217076144145,9.11138703254217,14.6907994406911,0.157731082679119,0.137114433605739,0.42438965179803,16.7535281597607,0,0,0.319984845586813,0,0.57423196411502,0,0.646413698057667,0.380046838912748,0.252030129759931,0.221730510655305,9.52546010189447,10.4561013889377,31.6963362030877,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0,0,18.9681886050988,7.24964403023757,8.36048566019419,7.13930750289349,35.9381410912429,0.167782606057736,0,0,0.257259436035947,1.14613375975503,0,5.05791152148994,2.11596391708813,10.775133859605,1.35537812827653,0.889294796111139,0,0,0,2.99600110518405,6.53171119046643,6.11768712620018,3.64516033495565,5.25812403378455,4.57041575046086,6.18431914664518,4.65465037016825,5.75072826109418,7.35375029288017,2.20231761998777,7.02280359468532,6.60508093001847,8.5726087024626,7.593474419,9.89735404057844,8.93385596804419,2.8138130501584,6.87592114995646,5.00868595305235,5.41012387036591,4.28718725398191,15.4481434399695,9.52201657345497,52.7553369437054,10.3250865237766,0.679971333707751,1.61910957491345,1.29955283489534,0.896053774194671,10.2524426696179,0.170430322578058,0,0,1.83096445709685,0,0,0,2.16491041011214,0.506719730950197,0.505524445014783,7.53613606145796,10.8753911131812,22.1178787206589,14.9197381018877,15.8322048722313,16.3737003051802,8.59119051149949,18.34383831317,18.0959891514733,429.872048890076,43.8136051467332,3.5384422077995,9.05894359705491,8.61281921995535,10.6672555689749,9.31958806090611,5.5628351432194,3.56059401582874,6.38642638021478,0,0,0,5.54225365797844,11.8950156732843,2.51308704225729,9.21268897019065,4.85859368927628,9.14267396062064,4.86723789203273,35.3382592560598,8.21086006026614,6.82351447770922,18.0979996062368,4.29397461776922,5.0578462975364,7.92273371143537,9.64510834148576,12.7228253412983,15.8861013153214,15.9292931751539,28.4573707812917,5.6047678162539,6.05139456537022,5.63043597324636,4.82230611340665,2.78047249225598,6.96504333044333,8.64284972913362,39.2097505632432,0,0,0,27.3406019746863,19.7001890384121,14.0448407939592,22.490749880595,15.9379027715397,16.1980468531747,16.9749779667798,18.2425912951741,23.8201298429026,16.6205448412615,32.6693253517399,50.9112123947974,31.8715972587224,38.6408202912249,40.6645448843926,4.20579897128254,9.36431972651488,0.660837565967596,4.7601101999438,29.4337785738623,28.3328739669735,31.4436605625908,32.6727309889815,31.3553041821267,29.2947464213341,3.32170343081158,31.1281024428381,13.3207660664143,18.7019083718682,16.7669114922443,5.39291645192533,6.70027954611552,6.17337947088538,16.311439481965,21.8214659084582,37.1935527721165,35.4353310450847,40.923974792369,50.0769754016874,62.9835909757603,59.3392794878001,54.0075623774329,45.6569506510662,5.63259991465583,29.8652739231808,26.142346350056,19.1132795527126,12.7801876474757,8.20002343158217,8.91190481234969,13.5217184601881,3.40483976227574,7.68771956926628,4.31304619582064,9.67566463938109,5.30464044294753,7.07220858251913,6.81710171383266,5.78932225636041,104.385552444132,15.5382957651798,27.8670109715864,20.708900464573,25.5812370634467,44.2216519646394,75.6978778017524,56.1984905830461,63.2116927865826,64.8891540670911,66.8115480674871,74.2300815662293,68.7286227826264,83.4625068015322,0,0,10.3270497333998,14.0727740615414,7.22477654945064,6.68106613575558,0,14.3908428506493,0.315508219416257,0,0,0.238968797952552,0.445597348164788,0,0,0,0,5.46246237917072,19.5877317587411,53.2416154965093,66.1321054975519,26.8901300445233,14.6019652173959,32.0470439724576,13.302236506449,16.0314317792513,27.4630760379119,20.2907197642992,21.7079766261306,22.9026249570828,17.1118741624666,15.8018378967908,20.0295356292498,21.6584640821192,7.14923172082955,8.8229936075342,13.8413791647547,11.1455258216428,14.3645589250242,15.161349496176,15.3030589159972,27.4018454203139,47.1690133208058,46.3912235191766,14.1138174755176,16.818397800031,6.29711264114032,5.1869115438214,2.38744688006273,5.41664969158702,9.91034844541493,7.41701208042039,4.61351378154202,31.577190798373,18.5194527369712,2.0720530270516,7.92826520781946,1.83022538565218,0.679913719975421,0.839708713941948,1.24379976423981,12.4107180341965,25.3068794864908,20.7385856469386,10.2605073780711,7.3180903605064,10.4814030598165,7.95699643670442,10.9102561557443,9.42321391142507,10.8876577565106,6.83473244395618,1.12738587736838,23.4740977289047,17.5385999884523,15.9449974442119,10.5911055251739,10.644235905919,10.5621514781179,8.07267186032491,4.71867049915699,1.44950472495604,3.16833006883652,1.26404448251271,8.91990947276722,4.00572732942826,3.50786222040047,2.8644271306797,3.3775830312815,1.20195449519969,1.47689527174577,0.504832249740738,0.990688486514998,0.806609481094724,1.26695244961678,0.577271049841977,0.584384510907845,26.3007244993645,81.6908308416558,63.6071243361183,87.3000005093208,15.8415467106396,22.7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| |||
|short_description=p2@Podxl | |||
}} | |||
Revision as of 09:39, 14 September 2013
| Short description: | p2@Podxl |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Podxl_5end |
| Coexpression cluster: | MCL_coexpression_mm9:531 |
| Association with transcript: | 26bp_to_ENSMUST00000048101, NM_013723, uc009bgh.2_5end |
| EntrezGene: | Podxl |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| trunk region element | 1.67e-11 | 79 |
| lung | 6.14e-09 | 14 |
| respiratory tube | 6.14e-09 | 14 |
| respiration organ | 6.14e-09 | 14 |
| pair of lungs | 6.14e-09 | 14 |
| lung primordium | 6.14e-09 | 14 |
| lung bud | 6.14e-09 | 14 |
| epithelial bud | 1.20e-08 | 17 |
| subdivision of trunk | 4.38e-08 | 66 |
| urinary system structure | 9.01e-08 | 18 |
| renal system | 3.30e-07 | 19 |
| trunk | 4.25e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
