FFCP PHASE1:Mm9::chr7:118172279..118172299,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22083|HGNC=|MCL_coexpression_id=50|UniProt=Q62018,Q05CJ7|association_with_transcript=-165bp_to_ENSMUST00000005749,ENSMUST00000098103,NM_009431,uc009jfw.1,uc009jfx.1_5end|description=CAGE_peak_6_at_Ctr9_5end|id=chr7:118172279..118172299,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,3.61e-08,3;CL:0000351,3.61e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003134,2.09e-11,8;UBERON:0003975,8.12e-11,5;UBERON:0000474,3.66e-10,9;UBERON:0005631,1.69e-08,3;UBERON:0000478,1.69e-08,3;UBERON:0000158,1.69e-08,3;UBERON:0003100,2.39e-08,11;UBERON:0000358,3.61e-08,3;UBERON:0000307,3.61e-08,3;UBERON:0007010,3.61e-08,3;UBERON:0003133,5.71e-08,24;UBERON:0005156,2.52e-07,26;UBERON:0000990,2.52e-07,26;UBERON:0000996,4.68e-07,1;UBERON:0001153,5.34e-07,1;UBERON:0001045,5.34e-07,1;UBERON:0000305,7.89e-07,1|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,0,0.422366166455,0.234064526321993,0,0,0.171200729931206,0,0,0.404950534779652,0,0.157731082679119,0,0,0.935476191661768,16.7801707529496,11.7539905112521,0,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.816677425049476,0,0.7813353445238,0,0,0,0,0.503587271902309,0.709638518536602,4.03802854755699,0,0,0,0.388859798148567,0,0,0.167782606057736,0,0,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0.441737081903227,0.244981598429908,0.287536413054709,0,0,0.127687338085188,0.307213066512487,0,0.365950574409639,0.52091337055676,0,0,0,0.294628585473668,0.284743361598206,0,0.075726193333184,0.302286240427142,1.15945795480671,0,0.679971333707751,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,1.48316980640624,0.144599356919912,0,0,0.220841518460394,0,1.86391761218122,0,0.209446706813455,0.255457055208591,0.599075622529601,0,0.889491589511453,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0.41557608911912,0.648965052271031,0.101839363850316,0.373220911830279,0,0,0.390361328888111,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0,0.411564272815887,0,0,0.772043721344145,0.852490498186778,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0.102904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.456994050438915,0,0,0.193952487167626,0.210407459670956,0.885311519739602,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0.488894929326078,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0.318909537314974,0,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0.468846746368813,0.327869890753351,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0.395287777946524,0.321321316421807,1.13552068166615,0.35613120733451,0.162886959353576,0.989820737835213,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0,0,0,0,0.469343416127421,2.75381692122966,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.291480836629851,1.29797711407357,0.170870880797853,0.82554747185289,0,0.565105371014073,0.136694227721025,0,0.169978429993855,0.69975726161829,1.10559979043539,0,0,0,0,0.209088296014469,0,0.269728692769641,0,0,0.129614973291793,0,1.69107881605257,0.448549638131936,0.165458490457098,0.388902376688095,0.129159823477731,0,0.234714477291508,0.13020438484395,0.524296722128554,0.483168241652012,1.44015003128933,0,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.304827226619999,0.302478555410522,0.292373642219257,0,0,0,1.10992976687032,0.358855426437903,1.84673078000486,0,0.375364950902364,1.46521299413812,1.92931541171159,0,0.564751842617067,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0,0.207574695168353,0,0.512200817262403,0,0.419226325255965,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0,0.376437521661322,0.0846146078916765,0,0,0,0,0,0.29551344712669,0,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0|short_description=p6@Ctr9}} | ||
|EntrezGene=22083 | |||
|HGNC= | |||
|MCL_coexpression_id=50 | |||
|UniProt=Q62018,Q05CJ7 | |||
|association_with_transcript=-165bp_to_ENSMUST00000005749,ENSMUST00000098103,NM_009431,uc009jfw.1,uc009jfx.1_5end | |||
|description=CAGE_peak_6_at_Ctr9_5end | |||
|id=chr7:118172279..118172299,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.61e-08,3;CL:0000351,3.61e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003134,2.09e-11,8;UBERON:0003975,8.12e-11,5;UBERON:0000474,3.66e-10,9;UBERON:0005631,1.69e-08,3;UBERON:0000478,1.69e-08,3;UBERON:0000158,1.69e-08,3;UBERON:0003100,2.39e-08,11;UBERON:0000358,3.61e-08,3;UBERON:0000307,3.61e-08,3;UBERON:0007010,3.61e-08,3;UBERON:0003133,5.71e-08,24;UBERON:0005156,2.52e-07,26;UBERON:0000990,2.52e-07,26;UBERON:0000996,4.68e-07,1;UBERON:0001153,5.34e-07,1;UBERON:0001045,5.34e-07,1;UBERON:0000305,7.89e-07,1 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,0,0.422366166455,0.234064526321993,0,0,0.171200729931206,0,0,0.404950534779652,0,0.157731082679119,0,0,0.935476191661768,16.7801707529496,11.7539905112521,0,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.816677425049476,0,0.7813353445238,0,0,0,0,0.503587271902309,0.709638518536602,4.03802854755699,0,0,0,0.388859798148567,0,0,0.167782606057736,0,0,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0.441737081903227,0.244981598429908,0.287536413054709,0,0,0.127687338085188,0.307213066512487,0,0.365950574409639,0.52091337055676,0,0,0,0.294628585473668,0.284743361598206,0,0.075726193333184,0.302286240427142,1.15945795480671,0,0.679971333707751,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,1.48316980640624,0.144599356919912,0,0,0.220841518460394,0,1.86391761218122,0,0.209446706813455,0.255457055208591,0.599075622529601,0,0.889491589511453,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0.41557608911912,0.648965052271031,0.101839363850316,0.373220911830279,0,0,0.390361328888111,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0,0.411564272815887,0,0,0.772043721344145,0.852490498186778,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0.102904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.456994050438915,0,0,0.193952487167626,0.210407459670956,0.885311519739602,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0.488894929326078,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0.318909537314974,0,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0.468846746368813,0.327869890753351,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0.395287777946524,0.321321316421807,1.13552068166615,0.35613120733451,0.162886959353576,0.989820737835213,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0,0,0,0,0.469343416127421,2.75381692122966,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.291480836629851,1.29797711407357,0.170870880797853,0.82554747185289,0,0.565105371014073,0.136694227721025,0,0.169978429993855,0.69975726161829,1.10559979043539,0,0,0,0,0.209088296014469,0,0.269728692769641,0,0,0.129614973291793,0,1.69107881605257,0.448549638131936,0.165458490457098,0.388902376688095,0.129159823477731,0,0.234714477291508,0.13020438484395,0.524296722128554,0.483168241652012,1.44015003128933,0,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.304827226619999,0.302478555410522,0.292373642219257,0,0,0,1.10992976687032,0.358855426437903,1.84673078000486,0,0.375364950902364,1.46521299413812,1.92931541171159,0,0.564751842617067,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0,0.207574695168353,0,0.512200817262403,0,0.419226325255965,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0,0.376437521661322,0.0846146078916765,0,0,0,0,0,0.29551344712669,0,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p6@Ctr9 | |||
}} |
Revision as of 11:29, 14 September 2013
Short description: | p6@Ctr9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ctr9_5end |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | -165bp_to_ENSMUST00000005749, ENSMUST00000098103, NM_009431, uc009jfw.1, uc009jfx.1_5end |
EntrezGene: | Ctr9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.61e-08 | 3 |
trophoblast cell | 3.61e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ | 2.09e-11 | 8 |
internal female genitalia | 8.12e-11 | 5 |
female reproductive system | 3.66e-10 | 9 |
extraembryonic membrane | 1.69e-08 | 3 |
extraembryonic structure | 1.69e-08 | 3 |
membranous layer | 1.69e-08 | 3 |
female organism | 2.39e-08 | 11 |
blastocyst | 3.61e-08 | 3 |
blastula | 3.61e-08 | 3 |
cleaving embryo | 3.61e-08 | 3 |
reproductive organ | 5.71e-08 | 24 |
reproductive structure | 2.52e-07 | 26 |
reproductive system | 2.52e-07 | 26 |
vagina | 4.68e-07 | 1 |
caecum | 5.34e-07 | 1 |
midgut | 5.34e-07 | 1 |
amnion | 7.89e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.