FFCP PHASE1:Mm9::chr7:19303548..19303561,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=243862|HGNC=|MCL_coexpression_id=56|UniProt=Q810J1|association_with_transcript=109bp_to_ENSMUST00000051973,NM_001004152,uc009fjq.1_5end|description=CAGE_peak_1_at_Psg22_5end|id=chr7:19303548..19303561,+|ontology_enrichment_celltype=CL:0000349!4.51e-11!3;CL:0000351!4.51e-11!3|ontology_enrichment_celltype_v019_2=CL:0000349,3.42e-29,3;CL:0000351,3.42e-29,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.41e-11!3;UBERON:0000478!1.41e-11!3;UBERON:0000158!1.41e-11!3;UBERON:0000358!4.51e-11!3;UBERON:0000307!4.51e-11!3;UBERON:0005795!1.00e-08!4;UBERON:0000995!1.00e-08!4;UBERON:0001987!2.68e-08!2;UBERON:0003124!2.68e-08!2;UBERON:0004340!2.68e-08!2;UBERON:0003975!4.78e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.16e-30,3;UBERON:0000478,1.16e-30,3;UBERON:0000158,1.16e-30,3;UBERON:0000358,3.42e-29,3;UBERON:0000307,3.42e-29,3;UBERON:0007010,3.42e-29,3;UBERON:0005795,4.70e-23,4;UBERON:0000995,4.70e-23,4;UBERON:0001987,4.07e-21,2;UBERON:0003124,4.07e-21,2;UBERON:0004340,4.07e-21,2;UBERON:0003975,1.34e-18,5;UBERON:0003134,6.94e-12,8;UBERON:0000305,2.90e-11,1;UBERON:0006834,4.58e-11,1;UBERON:0000029,1.12e-10,1;UBERON:0001097,1.12e-10,1;UBERON:0003968,1.12e-10,1;UBERON:0001467,1.12e-10,1;UBERON:0004175,1.23e-10,9;UBERON:0000474,1.23e-10,9;UBERON:0003100,8.21e-09,11|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783599367416806,0,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.8711323243136,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,35.5960753537498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,259.781580826527,106.975195786229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,2.44184548711471,3.05027112472217,4.19711540910196,0,7.50729901804728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Psg22}} | ||
|EntrezGene=243862 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|UniProt=Q810J1 | |||
|association_with_transcript=109bp_to_ENSMUST00000051973,NM_001004152,uc009fjq.1_5end | |||
|description=CAGE_peak_1_at_Psg22_5end | |||
|id=chr7:19303548..19303561,+ | |||
|ontology_enrichment_celltype=CL:0000349!4.51e-11!3;CL:0000351!4.51e-11!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.42e-29,3;CL:0000351,3.42e-29,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.41e-11!3;UBERON:0000478!1.41e-11!3;UBERON:0000158!1.41e-11!3;UBERON:0000358!4.51e-11!3;UBERON:0000307!4.51e-11!3;UBERON:0005795!1.00e-08!4;UBERON:0000995!1.00e-08!4;UBERON:0001987!2.68e-08!2;UBERON:0003124!2.68e-08!2;UBERON:0004340!2.68e-08!2;UBERON:0003975!4.78e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.16e-30,3;UBERON:0000478,1.16e-30,3;UBERON:0000158,1.16e-30,3;UBERON:0000358,3.42e-29,3;UBERON:0000307,3.42e-29,3;UBERON:0007010,3.42e-29,3;UBERON:0005795,4.70e-23,4;UBERON:0000995,4.70e-23,4;UBERON:0001987,4.07e-21,2;UBERON:0003124,4.07e-21,2;UBERON:0004340,4.07e-21,2;UBERON:0003975,1.34e-18,5;UBERON:0003134,6.94e-12,8;UBERON:0000305,2.90e-11,1;UBERON:0006834,4.58e-11,1;UBERON:0000029,1.12e-10,1;UBERON:0001097,1.12e-10,1;UBERON:0003968,1.12e-10,1;UBERON:0001467,1.12e-10,1;UBERON:0004175,1.23e-10,9;UBERON:0000474,1.23e-10,9;UBERON:0003100,8.21e-09,11 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783599367416806,0,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.8711323243136,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,35.5960753537498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,259.781580826527,106.975195786229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,2.44184548711471,3.05027112472217,4.19711540910196,0,7.50729901804728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Psg22 | |||
}} |
Revision as of 12:38, 14 September 2013
Short description: | p1@Psg22 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Psg22_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | 109bp_to_ENSMUST00000051973, NM_001004152, uc009fjq.1_5end |
EntrezGene: | Psg22 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.42e-29 | 3 |
trophoblast cell | 3.42e-29 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.16e-30 | 3 |
extraembryonic structure | 1.16e-30 | 3 |
membranous layer | 1.16e-30 | 3 |
blastocyst | 3.42e-29 | 3 |
blastula | 3.42e-29 | 3 |
cleaving embryo | 3.42e-29 | 3 |
embryonic uterus | 4.70e-23 | 4 |
uterus | 4.70e-23 | 4 |
placenta | 4.07e-21 | 2 |
chorion | 4.07e-21 | 2 |
allantois | 4.07e-21 | 2 |
internal female genitalia | 1.34e-18 | 5 |
female reproductive organ | 6.94e-12 | 8 |
amnion | 2.90e-11 | 1 |
uterus or analog | 4.58e-11 | 1 |
lymph node | 1.12e-10 | 1 |
axillary lymph node | 1.12e-10 | 1 |
peripheral lymph node | 1.12e-10 | 1 |
shoulder | 1.12e-10 | 1 |
internal genitalia | 1.23e-10 | 9 |
female reproductive system | 1.23e-10 | 9 |
female organism | 8.21e-09 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.