FFCP PHASE1:Mm9::chr8:125842441..125842450,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=14087|HGNC=|UniProt=|association_with_transcript=9bp_to_ENSMUST00000150318,ENSMUST00000155488_5end|description=CAGE_peak_2_at_Fanca_5end|id=chr8:125842441..125842450,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!1.71e-07!14;UBERON:0003918!1.71e-07!14;UBERON:0005095!1.71e-07!14;UBERON:0007687!1.71e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.26e-16,14;UBERON:0003918,4.26e-16,14;UBERON:0011143,4.26e-16,14;UBERON:0005095,4.26e-16,14;UBERON:0007687,4.26e-16,14;UBERON:0006554,3.54e-12,18;UBERON:0001008,1.87e-11,19;UBERON:0000489,3.22e-10,21|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0.0797721589953364,0,0,0.999329285446988,0.607425802169478,1.39912375625629,0,0.137114433605739,0.42438965179803,0.680346321208558,0.0992909512008853,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,2.54012269383853,1.84519436275371,0,0,0.166234645358492,0,0,0,1.0470474879476,0,0.683045484958446,0,0,0.101376931219515,0.367093504323363,0,0.218025156380447,0.439372365468944,0,0.55994568650145,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,1.77858959222228,0,0,0.7104801149461,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0.367472397644862,0.575072826109418,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.563373679106722,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0,1.04091196059682,0.304465478312141,0.230615497256059,0.452167921657868,0.352766121407114,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0.359445373517761,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0,0,0,0,0.611036183101898,0.746441823660558,2.0217820674694,0,0.390361328888111,0.689706313300419,0.360124259610698,0.452114453507145,0.544291993210623,0.640568601424249,0.374806898238915,0,1.07783996466421,1.51284864134255,0.703804496655795,0.657587197282725,0.278047249225598,0.348252166522167,0,0.796137067273973,1.40442637462647,0,0.284163499395593,0.828503090142008,0.703578179943289,0.540186184383045,0.473489471170421,0.196764231747404,0,0.465067889500816,0,0.233530684734339,0,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0.696710015581316,0.515469845288373,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,1.89667900953082,1.14248512609729,0,1.22190796707189,0.969762435838129,2.10407459670956,1.01178459398812,1.03327103585722,0.31399745568275,1.1105744752962,0,0.333690211432188,0.982794975566015,0.224862112384854,0.202860121388503,0.964708639009667,0.50925170356284,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.757965647081939,1.30371981153621,0.678980343100753,0.234690248288502,0.335012514883631,0,0,0.472905432318573,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0.163934945376675,0,1.26203287766503,0.780877488593277,0.646270193198397,0.477937595905104,0,1.13230612315533,0,1.16902343164525,0.395287777946524,0,0.283880170416537,1.06839362200353,0.325773918707152,0.494910368917606,0,0.728341908464944,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.517434735131018,0,0,0.713475270408282,0.329098041204242,0,0,0,0,0,0,0.361877549568935,0.238744688006273,0.492422699235184,0,0.18542530201051,0.170870880797853,0.206386867963223,0.925972636848558,0.188368457004691,0.27338845544205,0.686334519619568,0.339956859987711,0.979660166265606,0,0,0.632671987162271,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0,0,0,0,0,0.897099276263873,0.165458490457098,0.194451188344048,0.516639293910924,0.675824501963113,0.234714477291508,0.781226309063701,2.83120229949419,0.966336483304024,2.88030006257865,0.948033361884535,0.810900861160657,0.410843828659309,0.51968329191118,0.895133478337407,0,0.841368146639782,1.32920574457119,0.403865799792591,1.143102099825,0.403304740547362,0.779663045918019,0.673482891482306,0.467507608726276,0,0.887943813496259,0.807424709485281,0.167884616364078,0,0,0,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.415149390336707,1.19707462020309,0.512200817262403,0.243106717068294,0.419226325255965,0,0,0,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.34461281373368,0,0.231768651889711,0,0.412085900803307,0,0.342869252385415,0.354951612318675,0,0.145346416632329,0,0.169229215783353,0.182927972872773,1.05227884575137,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p2@Fanca}} | ||
|EntrezGene=14087 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENSMUST00000150318,ENSMUST00000155488_5end | |||
|description=CAGE_peak_2_at_Fanca_5end | |||
|id=chr8:125842441..125842450,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.71e-07!14;UBERON:0003918!1.71e-07!14;UBERON:0005095!1.71e-07!14;UBERON:0007687!1.71e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.26e-16,14;UBERON:0003918,4.26e-16,14;UBERON:0011143,4.26e-16,14;UBERON:0005095,4.26e-16,14;UBERON:0007687,4.26e-16,14;UBERON:0006554,3.54e-12,18;UBERON:0001008,1.87e-11,19;UBERON:0000489,3.22e-10,21 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0.0797721589953364,0,0,0.999329285446988,0.607425802169478,1.39912375625629,0,0.137114433605739,0.42438965179803,0.680346321208558,0.0992909512008853,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,2.54012269383853,1.84519436275371,0,0,0.166234645358492,0,0,0,1.0470474879476,0,0.683045484958446,0,0,0.101376931219515,0.367093504323363,0,0.218025156380447,0.439372365468944,0,0.55994568650145,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,1.77858959222228,0,0,0.7104801149461,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0.367472397644862,0.575072826109418,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.563373679106722,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0,1.04091196059682,0.304465478312141,0.230615497256059,0.452167921657868,0.352766121407114,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0.359445373517761,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0,0,0,0,0.611036183101898,0.746441823660558,2.0217820674694,0,0.390361328888111,0.689706313300419,0.360124259610698,0.452114453507145,0.544291993210623,0.640568601424249,0.374806898238915,0,1.07783996466421,1.51284864134255,0.703804496655795,0.657587197282725,0.278047249225598,0.348252166522167,0,0.796137067273973,1.40442637462647,0,0.284163499395593,0.828503090142008,0.703578179943289,0.540186184383045,0.473489471170421,0.196764231747404,0,0.465067889500816,0,0.233530684734339,0,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0.696710015581316,0.515469845288373,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,1.89667900953082,1.14248512609729,0,1.22190796707189,0.969762435838129,2.10407459670956,1.01178459398812,1.03327103585722,0.31399745568275,1.1105744752962,0,0.333690211432188,0.982794975566015,0.224862112384854,0.202860121388503,0.964708639009667,0.50925170356284,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0.757965647081939,1.30371981153621,0.678980343100753,0.234690248288502,0.335012514883631,0,0,0.472905432318573,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0.163934945376675,0,1.26203287766503,0.780877488593277,0.646270193198397,0.477937595905104,0,1.13230612315533,0,1.16902343164525,0.395287777946524,0,0.283880170416537,1.06839362200353,0.325773918707152,0.494910368917606,0,0.728341908464944,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.517434735131018,0,0,0.713475270408282,0.329098041204242,0,0,0,0,0,0,0.361877549568935,0.238744688006273,0.492422699235184,0,0.18542530201051,0.170870880797853,0.206386867963223,0.925972636848558,0.188368457004691,0.27338845544205,0.686334519619568,0.339956859987711,0.979660166265606,0,0,0.632671987162271,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0,0,0,0,0,0.897099276263873,0.165458490457098,0.194451188344048,0.516639293910924,0.675824501963113,0.234714477291508,0.781226309063701,2.83120229949419,0.966336483304024,2.88030006257865,0.948033361884535,0.810900861160657,0.410843828659309,0.51968329191118,0.895133478337407,0,0.841368146639782,1.32920574457119,0.403865799792591,1.143102099825,0.403304740547362,0.779663045918019,0.673482891482306,0.467507608726276,0,0.887943813496259,0.807424709485281,0.167884616364078,0,0,0,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.415149390336707,1.19707462020309,0.512200817262403,0.243106717068294,0.419226325255965,0,0,0,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.34461281373368,0,0.231768651889711,0,0.412085900803307,0,0.342869252385415,0.354951612318675,0,0.145346416632329,0,0.169229215783353,0.182927972872773,1.05227884575137,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p2@Fanca | |||
}} |
Revision as of 15:03, 14 September 2013
Short description: | p2@Fanca |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fanca_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENSMUST00000150318, ENSMUST00000155488_5end |
EntrezGene: | Fanca |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 4.26e-16 | 14 |
kidney mesenchyme | 4.26e-16 | 14 |
upper urinary tract | 4.26e-16 | 14 |
kidney rudiment | 4.26e-16 | 14 |
kidney field | 4.26e-16 | 14 |
urinary system structure | 3.54e-12 | 18 |
renal system | 1.87e-11 | 19 |
cavitated compound organ | 3.22e-10 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.