FFCP PHASE1:Mm9::chr8:26629229..26629243,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14182|HGNC=|UniProt=P16092,Q8CBY7,Q8CIM9|association_with_transcript=0bp_to_NM_001079908,NM_001079909,NM_010206,uc009lfy.1,uc009lfz.1,uc009lga.1_5end|description=CAGE_peak_2_at_Fgfr1_5end|id=chr8:26629229..26629243,+|ontology_enrichment_celltype=CL:0000055!5.15e-09!50;CL:0000221!8.30e-08!44;CL:0000133!8.30e-08!44;CL:0002319!1.23e-07!43;CL:0000333!9.94e-07!10;CL:0000095!9.94e-07!10;CL:0000243!9.94e-07!10;CL:0000123!9.94e-07!10;CL:0000125!9.94e-07!10;CL:0000030!9.94e-07!10;CL:0000339!9.94e-07!10|ontology_enrichment_celltype_v019_2=CL:0000221,7.71e-08,44;CL:0000133,7.71e-08,44;CL:0002319,1.15e-07,43;CL:0000333,9.35e-07,10;CL:0000095,9.35e-07,10;CL:0000243,9.35e-07,10;CL:0000123,9.35e-07,10;CL:0000125,9.35e-07,10;CL:0000030,9.35e-07,10;CL:0000339,9.35e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!9.99e-11!102;UBERON:0000924!9.99e-11!102;UBERON:0006601!9.99e-11!102;UBERON:0000073!1.04e-08!75;UBERON:0001016!1.04e-08!75;UBERON:0001017!3.35e-08!73;UBERON:0005743!3.35e-08!73;UBERON:0000468!6.68e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.68e-10,95;UBERON:0000924,2.68e-10,95;UBERON:0006601,2.68e-10,95;UBERON:0001016,9.61e-09,75;UBERON:0001017,3.10e-08,73;UBERON:0010371,8.90e-07,73|phase1_expression=14.0930985452219,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0.171200729931206,0,0,0,0.699561878128147,0,0,0,4.67738095830884,0.0992909512008853,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,17.3737608806297,15.7134243390248,10.6457116253775,26.6013057078333,26.8170942347949,32.0741826792329,40.6358489065252,26.0374744223174,37.3756667348926,0,0.725362142011344,0.336093799142464,16.2073444702647,15.4728057566929,9.28209766099396,7.28339259094552,6.34789175126439,5.70448263155561,16.6033820713875,16.0073063300005,6.29929802096979,8.89979726310277,4.2628806896766,13.4820049733282,16.9056054341484,9.43575472007147,9.99043943654511,7.78202357000113,10.2834354385369,10.8225585066291,6.1245399607477,5.94241920313065,2.75765635983006,9.91042928994498,9.57655035638908,11.0596703944495,5.80299666012853,7.593474419,4.16730696445408,16.7509799400829,13.5063026407603,11.7654650788144,11.7851434189467,13.0981946335175,8.94717339961443,13.4035362199736,11.5624486963382,7.8263411949453,2.58127163094416,0,1.07940638327563,0.649776417447669,0,5.89866564553358,10.9075406449957,7.79358013808606,8.48014978824817,10.9857867425811,3.84979432242953,5.09610479413291,0,1.08245520505607,2.02687892380079,0.505524445014783,1.94112595522402,2.33044095282455,12.7660239595749,6.41895709034703,8.22056791442781,8.07154240396205,6.63179618431539,8.70156432804216,12.6923257242972,13.1013332899218,17.0627241165496,4.42305275974937,15.6913844448987,9.05450225687614,7.27312879702833,3.72783522436244,16.1029438356351,14.8707161837553,2.04365644166873,0.239630249011841,0,0.254140454146129,15.8778077769112,10.5225138648284,6.28271760564322,5.04090528557602,4.60287823194595,10.8049783170971,7.46309810111685,17.5163705822544,9.45492976636707,2.52722758433675,2.52530227063769,14.3132487258974,8.96618207290544,10.803727788321,12.2070902446929,11.4981683565744,8.45550553880009,7.02762934197966,8.01980449290949,21.1256633074185,20.6125627382923,21.1141348996739,16.4396799320681,25.8583941779806,21.2433821578522,18.5203922767149,10.7478504081986,0,0,0,7.45652781127807,8.44293815931946,4.14142741360334,9.70653415899362,8.46086196513836,6.17068451549513,4.41814495025775,5.90201483079162,5.95503246072564,5.75959474697182,6.07419617092652,6.32336714457675,6.28659945928929,6.14740322814942,6.03928884421673,12.4071069652835,26.1377715443382,1.65209391491899,2.11560453330835,12.5840067815788,12.0763069367428,7.7320476793256,5.24377164020691,4.44756087689741,5.32631753115166,0.474529061544512,1.97638745668813,4.02136334080431,3.78017296878187,3.8992817423824,1.79763881730844,1.94524244887225,2.78797782556114,16.8804431848243,13.9383185383869,14.6520056375005,15.8848035719345,14.3524840504043,11.6425461017929,8.91635173452028,4.28069429140846,4.86696056308262,5.30607804863742,0.592905254174298,2.33583148002532,1.17935397067922,0.899448449539415,1.21716072833102,0.241177159752417,1.52775511068852,0.575392274901621,1.29708181420028,1.09824565275233,1.43768206527355,2.97712758134803,1.5601883655728,1.51547326768267,1.25578189465339,0.482443521363367,5.54259570499814,9.28507917675375,8.31121379854332,7.29903868833309,6.10194645550105,5.86271901046355,7.85544014923845,5.65887578787617,12.2955412402829,7.9727288273559,11.6401981119966,7.20998584749247,4.14443956478149,6.219909519005,1.50791283939272,0.54390568381871,2.95058563811422,6.62248191131358,22.3165320083031,19.1055049145291,17.5410391553043,10.856249869788,10.0962630213202,8.98009111882268,12.0637102730367,11.9484398976276,13.590719119026,11.0399847007645,15.382806663646,9.35218745316198,13.8350722281283,4.81981974632711,5.96148357874728,15.313641915384,20.5237568785506,9.40329700943452,21.2392221343941,10.4395673546642,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| ||
|EntrezGene=14182 | |||
|HGNC= | |||
|UniProt=P16092,Q8CBY7,Q8CIM9 | |||
|association_with_transcript=0bp_to_NM_001079908,NM_001079909,NM_010206,uc009lfy.1,uc009lfz.1,uc009lga.1_5end | |||
|description=CAGE_peak_2_at_Fgfr1_5end | |||
|id=chr8:26629229..26629243,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.15e-09!50;CL:0000221!8.30e-08!44;CL:0000133!8.30e-08!44;CL:0002319!1.23e-07!43;CL:0000333!9.94e-07!10;CL:0000095!9.94e-07!10;CL:0000243!9.94e-07!10;CL:0000123!9.94e-07!10;CL:0000125!9.94e-07!10;CL:0000030!9.94e-07!10;CL:0000339!9.94e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,7.71e-08,44;CL:0000133,7.71e-08,44;CL:0002319,1.15e-07,43;CL:0000333,9.35e-07,10;CL:0000095,9.35e-07,10;CL:0000243,9.35e-07,10;CL:0000123,9.35e-07,10;CL:0000125,9.35e-07,10;CL:0000030,9.35e-07,10;CL:0000339,9.35e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.99e-11!102;UBERON:0000924!9.99e-11!102;UBERON:0006601!9.99e-11!102;UBERON:0000073!1.04e-08!75;UBERON:0001016!1.04e-08!75;UBERON:0001017!3.35e-08!73;UBERON:0005743!3.35e-08!73;UBERON:0000468!6.68e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.68e-10,95;UBERON:0000924,2.68e-10,95;UBERON:0006601,2.68e-10,95;UBERON:0001016,9.61e-09,75;UBERON:0001017,3.10e-08,73;UBERON:0010371,8.90e-07,73 | |||
|phase1_expression=14.0930985452219,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0.171200729931206,0,0,0,0.699561878128147,0,0,0,4.67738095830884,0.0992909512008853,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,17.3737608806297,15.7134243390248,10.6457116253775,26.6013057078333,26.8170942347949,32.0741826792329,40.6358489065252,26.0374744223174,37.3756667348926,0,0.725362142011344,0.336093799142464,16.2073444702647,15.4728057566929,9.28209766099396,7.28339259094552,6.34789175126439,5.70448263155561,16.6033820713875,16.0073063300005,6.29929802096979,8.89979726310277,4.2628806896766,13.4820049733282,16.9056054341484,9.43575472007147,9.99043943654511,7.78202357000113,10.2834354385369,10.8225585066291,6.1245399607477,5.94241920313065,2.75765635983006,9.91042928994498,9.57655035638908,11.0596703944495,5.80299666012853,7.593474419,4.16730696445408,16.7509799400829,13.5063026407603,11.7654650788144,11.7851434189467,13.0981946335175,8.94717339961443,13.4035362199736,11.5624486963382,7.8263411949453,2.58127163094416,0,1.07940638327563,0.649776417447669,0,5.89866564553358,10.9075406449957,7.79358013808606,8.48014978824817,10.9857867425811,3.84979432242953,5.09610479413291,0,1.08245520505607,2.02687892380079,0.505524445014783,1.94112595522402,2.33044095282455,12.7660239595749,6.41895709034703,8.22056791442781,8.07154240396205,6.63179618431539,8.70156432804216,12.6923257242972,13.1013332899218,17.0627241165496,4.42305275974937,15.6913844448987,9.05450225687614,7.27312879702833,3.72783522436244,16.1029438356351,14.8707161837553,2.04365644166873,0.239630249011841,0,0.254140454146129,15.8778077769112,10.5225138648284,6.28271760564322,5.04090528557602,4.60287823194595,10.8049783170971,7.46309810111685,17.5163705822544,9.45492976636707,2.52722758433675,2.52530227063769,14.3132487258974,8.96618207290544,10.803727788321,12.2070902446929,11.4981683565744,8.45550553880009,7.02762934197966,8.01980449290949,21.1256633074185,20.6125627382923,21.1141348996739,16.4396799320681,25.8583941779806,21.2433821578522,18.5203922767149,10.7478504081986,0,0,0,7.45652781127807,8.44293815931946,4.14142741360334,9.70653415899362,8.46086196513836,6.17068451549513,4.41814495025775,5.90201483079162,5.95503246072564,5.75959474697182,6.07419617092652,6.32336714457675,6.28659945928929,6.14740322814942,6.03928884421673,12.4071069652835,26.1377715443382,1.65209391491899,2.11560453330835,12.5840067815788,12.0763069367428,7.7320476793256,5.24377164020691,4.44756087689741,5.32631753115166,0.474529061544512,1.97638745668813,4.02136334080431,3.78017296878187,3.8992817423824,1.79763881730844,1.94524244887225,2.78797782556114,16.8804431848243,13.9383185383869,14.6520056375005,15.8848035719345,14.3524840504043,11.6425461017929,8.91635173452028,4.28069429140846,4.86696056308262,5.30607804863742,0.592905254174298,2.33583148002532,1.17935397067922,0.899448449539415,1.21716072833102,0.241177159752417,1.52775511068852,0.575392274901621,1.29708181420028,1.09824565275233,1.43768206527355,2.97712758134803,1.5601883655728,1.51547326768267,1.25578189465339,0.482443521363367,5.54259570499814,9.28507917675375,8.31121379854332,7.29903868833309,6.10194645550105,5.86271901046355,7.85544014923845,5.65887578787617,12.2955412402829,7.9727288273559,11.6401981119966,7.20998584749247,4.14443956478149,6.219909519005,1.50791283939272,0.54390568381871,2.95058563811422,6.62248191131358,22.3165320083031,19.1055049145291,17.5410391553043,10.856249869788,10.0962630213202,8.98009111882268,12.0637102730367,11.9484398976276,13.590719119026,11.0399847007645,15.382806663646,9.35218745316198,13.8350722281283,4.81981974632711,5.96148357874728,15.313641915384,20.5237568785506,9.40329700943452,21.2392221343941,10.4395673546642,8.46505959501303,5.65815239267694,7.97315110778086,8.30074899448604,9.30341855405596,9.08834323693764,10.3384239731569,10.7452497698177,11.5960469432499,8.25084345985495,4.42571487479924,16.2054984628179,17.5927809944546,8.78781843629528,11.1724347194632,12.8425548673491,11.3538824215463,14.0053876592716,22.9978273902436,25.6316805745222,5.07215315526412,10.7176064411962,17.115229229766,13.5704081088351,10.7435109602823,7.87876318776294,2.04036585640896,21.3239097312086,0.854354403989263,14.2406938894624,7.59297562215818,1.13021074202815,0.683471138605126,0.228778173206523,5.09935289981566,4.89830083132803,5.11339903076368,2.86401185404534,17.3984796469624,9.14937602070819,7.45236851670429,9.19988502463662,6.11415178489297,6.74321731924104,6.94289028092822,3.66458318777641,2.59229946583586,3.72803587852155,2.81846469342095,9.12050930868271,7.1147150896552,11.4726201122988,9.04118764344118,9.79945527846513,10.3274370008263,7.03103678157331,6.60613869881978,0.483168241652012,2.01621004380506,1.26404448251271,6.48720688928525,5.54639168690067,1.03936658382236,1.9692936523423,0.596044064343795,1.20195449519969,0.738447635872886,0.807731599585181,0.609654453239999,1.00826185136841,0.584747284438515,0.0962118416403295,0.701261413089414,8.61575457737803,10.211353855207,6.81825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| |||
|short_description=p2@Fgfr1 | |||
}} |
Revision as of 15:25, 14 September 2013
Short description: | p2@Fgfr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fgfr1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001079908, NM_001079909, NM_010206, uc009lfy.1, uc009lfz.1, uc009lga.1_5end |
EntrezGene: | Fgfr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 7.71e-08 | 44 |
neurectodermal cell | 7.71e-08 | 44 |
neural cell | 1.15e-07 | 43 |
migratory neural crest cell | 9.35e-07 | 10 |
neuron associated cell | 9.35e-07 | 10 |
glial cell (sensu Vertebrata) | 9.35e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 9.35e-07 | 10 |
glial cell | 9.35e-07 | 10 |
glioblast | 9.35e-07 | 10 |
glioblast (sensu Vertebrata) | 9.35e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.68e-10 | 95 |
ectoderm | 2.68e-10 | 95 |
presumptive ectoderm | 2.68e-10 | 95 |
nervous system | 9.61e-09 | 75 |
central nervous system | 3.10e-08 | 73 |
ecto-epithelium | 8.90e-07 | 73 |
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