FFCP PHASE1:Mm9::chr8:59800991..59801054,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1847|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:59800991..59801054,+|id=chr8:59800991..59801054,+|ontology_enrichment_celltype=CL:0000107!1.22e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,3.26e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!3.41e-12!18;UBERON:0000948!3.41e-12!18;UBERON:0005498!3.41e-12!18;UBERON:0004140!3.41e-12!18;UBERON:0009881!3.41e-12!18;UBERON:0004141!3.41e-12!18;UBERON:0003084!3.41e-12!18;UBERON:0007005!3.41e-12!18;UBERON:0004139!3.41e-12!18;UBERON:0004291!3.41e-12!18;UBERON:0004872!2.72e-10!33;UBERON:0004535!8.35e-09!23;UBERON:0001009!8.35e-09!23;UBERON:0000926!1.79e-08!193;UBERON:0004120!1.79e-08!193;UBERON:0006603!1.79e-08!193;UBERON:0002410!1.22e-07!9;UBERON:0000468!2.79e-07!333;UBERON:0002342!3.21e-07!10;UBERON:0005062!3.21e-07!10;UBERON:0003914!3.80e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.43e-13,18;UBERON:0000948,3.43e-13,18;UBERON:0005498,3.43e-13,18;UBERON:0004140,3.43e-13,18;UBERON:0009881,3.43e-13,18;UBERON:0004141,3.43e-13,18;UBERON:0003084,3.43e-13,18;UBERON:0007005,3.43e-13,18;UBERON:0004139,3.43e-13,18;UBERON:0004291,3.43e-13,18;UBERON:0004872,3.14e-10,33;UBERON:0004535,1.96e-09,23;UBERON:0001009,1.96e-09,23;UBERON:0002410,3.26e-08,9|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0.57423196411502,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.7962598756567,61.6046895868327,77.3508138416163,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.151452386666368,0,4.63783181922684,1.72084775396277,0.679971333707751,0,0.649776417447669,0.448026887097336,1.54488862144927,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,38.2980718787248,9.71517829890361,17.0500667854799,11.3001593655469,15.3737093363675,16.6975964132701,9.67632753238501,26.2026665798436,0.433798070759735,0,0.970601099684455,0.220841518460394,0,7.45567044872489,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,15.785101396799,0.248813941220186,1.51633655060205,0,0,0,0.540186389416048,0,0.0680364991513279,0,0,0,6.68260778091811,7.94245536704841,5.27853372491847,8.54863356467542,6.67313398141435,8.358051996532,10.0833246839892,6.76716507182877,0,0,0,14.7059298500206,21.1073453982987,24.308378297237,23.2009840873506,18.6926020160034,17.8949850949359,22.0907247512887,19.8522317035718,36.3140214761897,21.7219001885794,16.4167464079095,15.0787985755292,13.1579988682799,9.87975518809728,8.45500438190342,0,0,0,4.23120906661671,10.024547775156,5.80591679651096,7.47431275668141,2.62188582010345,4.22518283305254,3.99473814836374,2.37264530772256,6.0938613247884,3.77002813200404,3.78017296878187,6.04388670069272,3.59527763461689,3.8904848977445,3.18626037206988,1.70701110857774,1.48523066392647,0,1.01825663922657,0.581857461502877,0.280543279561274,0,0,0.156998727841375,0.123397163921801,1.48226313543574,1.83529616287703,1.17935397067922,1.12431056192427,1.62288097110802,2.17059443777175,1.01850340712568,1.43848068725405,3.08056930872567,0.549122826376163,2.87536413054709,1.11642284300551,1.24815069245824,1.01031551178845,1.07638448113147,0.482443521363367,0,3.41084541186873,1.79261474086228,1.01847051465113,0.234690248288502,0.167506257441816,0.714130922658041,1.17080188714679,1.7339865851681,0.221464689648775,0.159454768657487,0.655453258862952,0.172684981865896,0.723245292907558,0,0,0,0,0,0,0,0,27.4492150892143,30.4542220551378,30.8055458757902,27.4814117645435,23.171062104569,26.3261173633614,41.2906915708392,42.3770993971402,50.596835577155,0,4.11626247103979,11.3961986347043,17.5917916101862,14.5173708215831,1.32745138339963,7.04063844849446,0.906970670894253,3.39489143560617,7.97315110778086,8.30074899448604,8.78656196771952,3.27180356529755,2.49548164869305,4.42451461110142,1.05418608574999,0,0,0,0,0,0,0,0,0.304464949114599,26.0485595950719,9.10877904714427,2.42581237860458,0,4.19807509409354,1.74907482291652,2.14870219205646,1.64140899745061,3.49777003955821,0,0.683483523191411,6.19160603889667,4.25947412950337,1.88368457004691,1.36694227721025,1.83022538565218,0,0,0,16.2294005062569,10.597255784968,8.53941761932765,6.26430976766447,6.27264888043406,6.11415178489297,9.84509728609191,7.43881101528023,6.80565449158477,5.18459893167171,1.86401793926078,0.56369293868419,1.64468200648377,3.14371131868485,2.52786544847262,1.80823752868824,1.18269287843545,1.64300134104056,1.69265700297135,0.419437377702843,0,0.576060012515731,0,4.05450430580328,1.54066435747241,1.81889152168913,0.716106782669926,1.19208812868759,0.240390899039938,0.738447635872886,0.201932899896295,0.0762068066549998,0,0.194915761479505,0.288635524920988,0.116876902181569,2.49403421976732,0,0.0897138566094757,0,29.7511974809573,22.1465321032395,12.2711588259068,2.35805216986972,8.02515366456581,0,0,0,0,0,0,0,0,0,0,1.86817225651518,2.39414924040619,2.21953687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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1847 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:59800991..59801054,+ | |||
|id=chr8:59800991..59801054,+ | |||
|ontology_enrichment_celltype=CL:0000107!1.22e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.26e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.41e-12!18;UBERON:0000948!3.41e-12!18;UBERON:0005498!3.41e-12!18;UBERON:0004140!3.41e-12!18;UBERON:0009881!3.41e-12!18;UBERON:0004141!3.41e-12!18;UBERON:0003084!3.41e-12!18;UBERON:0007005!3.41e-12!18;UBERON:0004139!3.41e-12!18;UBERON:0004291!3.41e-12!18;UBERON:0004872!2.72e-10!33;UBERON:0004535!8.35e-09!23;UBERON:0001009!8.35e-09!23;UBERON:0000926!1.79e-08!193;UBERON:0004120!1.79e-08!193;UBERON:0006603!1.79e-08!193;UBERON:0002410!1.22e-07!9;UBERON:0000468!2.79e-07!333;UBERON:0002342!3.21e-07!10;UBERON:0005062!3.21e-07!10;UBERON:0003914!3.80e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.43e-13,18;UBERON:0000948,3.43e-13,18;UBERON:0005498,3.43e-13,18;UBERON:0004140,3.43e-13,18;UBERON:0009881,3.43e-13,18;UBERON:0004141,3.43e-13,18;UBERON:0003084,3.43e-13,18;UBERON:0007005,3.43e-13,18;UBERON:0004139,3.43e-13,18;UBERON:0004291,3.43e-13,18;UBERON:0004872,3.14e-10,33;UBERON:0004535,1.96e-09,23;UBERON:0001009,1.96e-09,23;UBERON:0002410,3.26e-08,9 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0.57423196411502,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.7962598756567,61.6046895868327,77.3508138416163,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.151452386666368,0,4.63783181922684,1.72084775396277,0.679971333707751,0,0.649776417447669,0.448026887097336,1.54488862144927,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,38.2980718787248,9.71517829890361,17.0500667854799,11.3001593655469,15.3737093363675,16.6975964132701,9.67632753238501,26.2026665798436,0.433798070759735,0,0.970601099684455,0.220841518460394,0,7.45567044872489,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,15.785101396799,0.248813941220186,1.51633655060205,0,0,0,0.540186389416048,0,0.0680364991513279,0,0,0,6.68260778091811,7.94245536704841,5.27853372491847,8.54863356467542,6.67313398141435,8.358051996532,10.0833246839892,6.76716507182877,0,0,0,14.7059298500206,21.1073453982987,24.308378297237,23.2009840873506,18.6926020160034,17.8949850949359,22.0907247512887,19.8522317035718,36.3140214761897,21.7219001885794,16.4167464079095,15.0787985755292,13.1579988682799,9.87975518809728,8.45500438190342,0,0,0,4.23120906661671,10.024547775156,5.80591679651096,7.47431275668141,2.62188582010345,4.22518283305254,3.99473814836374,2.37264530772256,6.0938613247884,3.77002813200404,3.78017296878187,6.04388670069272,3.59527763461689,3.8904848977445,3.18626037206988,1.70701110857774,1.48523066392647,0,1.01825663922657,0.581857461502877,0.280543279561274,0,0,0.156998727841375,0.123397163921801,1.48226313543574,1.83529616287703,1.17935397067922,1.12431056192427,1.62288097110802,2.17059443777175,1.01850340712568,1.43848068725405,3.08056930872567,0.549122826376163,2.87536413054709,1.11642284300551,1.24815069245824,1.01031551178845,1.07638448113147,0.482443521363367,0,3.41084541186873,1.79261474086228,1.01847051465113,0.234690248288502,0.167506257441816,0.714130922658041,1.17080188714679,1.7339865851681,0.221464689648775,0.159454768657487,0.655453258862952,0.172684981865896,0.723245292907558,0,0,0,0,0,0,0,0,27.4492150892143,30.4542220551378,30.8055458757902,27.4814117645435,23.171062104569,26.3261173633614,41.2906915708392,42.3770993971402,50.596835577155,0,4.11626247103979,11.3961986347043,17.5917916101862,14.5173708215831,1.32745138339963,7.04063844849446,0.906970670894253,3.39489143560617,7.97315110778086,8.30074899448604,8.78656196771952,3.27180356529755,2.49548164869305,4.42451461110142,1.05418608574999,0,0,0,0,0,0,0,0,0.304464949114599,26.0485595950719,9.10877904714427,2.42581237860458,0,4.19807509409354,1.74907482291652,2.14870219205646,1.64140899745061,3.49777003955821,0,0.683483523191411,6.19160603889667,4.25947412950337,1.88368457004691,1.36694227721025,1.83022538565218,0,0,0,16.2294005062569,10.597255784968,8.53941761932765,6.26430976766447,6.27264888043406,6.11415178489297,9.84509728609191,7.43881101528023,6.80565449158477,5.18459893167171,1.86401793926078,0.56369293868419,1.64468200648377,3.14371131868485,2.52786544847262,1.80823752868824,1.18269287843545,1.64300134104056,1.69265700297135,0.419437377702843,0,0.576060012515731,0,4.05450430580328,1.54066435747241,1.81889152168913,0.716106782669926,1.19208812868759,0.240390899039938,0.738447635872886,0.201932899896295,0.0762068066549998,0,0.194915761479505,0.288635524920988,0.116876902181569,2.49403421976732,0,0.0897138566094757,0,29.7511974809573,22.1465321032395,12.2711588259068,2.35805216986972,8.02515366456581,0,0,0,0,0,0,0,0,0,0,1.86817225651518,2.39414924040619,2.21953687480374,2.67417388775123,3.5634237646757,2.02227859295016,2.66696073361938,2.88449080134452,3.20919209591815,2.77966932940177,3.54871019846336,2.82939512079114,1.12369808963859,3.07320731543373,2.46972516509137,3.81034953026459,2.20180219295225,2.70072908649187,2.88460130562315,3.23837624295674,2.74295401908332,2.66213709239006,3.81497903915713,1.88950341622027,2.25862512996793,2.28459441307527,1.28049581010941,2.36762740294059,3.39510284614654,0.561142271657738,1.77952527186261,1.97008964751127,3.27384834535751,2.63392630016142,1.92906610981141,3.2475375131933,3.50897412668113,3.65280791882107,3.44318997723918,1.98532277207564,1.39120701372253 | |||
|short_description=p@chr8:59800991..59801054,+ | |||
}} |
Revision as of 15:48, 14 September 2013
Short description: | p@chr8:59800991..59801054, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:59800991..59801054, + |
Coexpression cluster: | MCL_coexpression_mm9:1847 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.26e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.43e-13 | 18 |
heart | 3.43e-13 | 18 |
primitive heart tube | 3.43e-13 | 18 |
primary heart field | 3.43e-13 | 18 |
anterior lateral plate mesoderm | 3.43e-13 | 18 |
heart tube | 3.43e-13 | 18 |
heart primordium | 3.43e-13 | 18 |
cardiac mesoderm | 3.43e-13 | 18 |
cardiogenic plate | 3.43e-13 | 18 |
heart rudiment | 3.43e-13 | 18 |
splanchnic layer of lateral plate mesoderm | 3.14e-10 | 33 |
cardiovascular system | 1.96e-09 | 23 |
circulatory system | 1.96e-09 | 23 |
autonomic nervous system | 3.26e-08 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.