FFCP PHASE1:Mm9::chr8:77397169..77397182,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71597|HGNC=|MCL_coexpression_id=12|UniProt=A1A546,B1Q2M1|association_with_transcript=96bp_to_NM_027837,uc009mgv.1,uc012ggb.1_5end|description=CAGE_peak_7_at_Isx_5end|id=chr8:77397169..77397182,+|ontology_enrichment_celltype=CL:0002563!1.56e-14!9;CL:0002251!1.56e-14!9;CL:0000239!9.92e-11!6;CL:0000677!9.92e-11!6;CL:0000212!9.92e-11!6;CL:0000584!9.92e-11!6;CL:0000075!4.66e-09!7;CL:0002076!6.31e-08!15;CL:0000066!1.51e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,2.83e-12,6;CL:0000677,2.83e-12,6;CL:0000584,2.83e-12,6;CL:0002563,3.79e-11,9;CL:0002251,3.79e-11,9;CL:0000075,1.76e-10,7;CL:0000682,6.30e-09,3;CL:0000066,8.33e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.21e-33!43;UBERON:0005409!2.89e-27!59;UBERON:0000344!1.75e-24!15;UBERON:0001242!2.05e-21!13;UBERON:0000060!2.05e-21!13;UBERON:0001262!2.05e-21!13;UBERON:0004786!2.05e-21!13;UBERON:0003350!1.56e-14!9;UBERON:0004808!1.56e-14!9;UBERON:0001277!1.56e-14!9;UBERON:0004923!1.03e-13!24;UBERON:0000485!1.60e-11!11;UBERON:0001007!3.13e-09!128;UBERON:0001555!3.13e-09!128;UBERON:0007026!3.13e-09!128;UBERON:0004119!6.02e-09!130;UBERON:0000925!6.02e-09!130;UBERON:0006595!6.02e-09!130;UBERON:0004921!6.44e-08!126;UBERON:0004185!6.44e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.64e-55,31;UBERON:0005409,5.73e-38,47;UBERON:0000344,2.22e-26,15;UBERON:0001242,1.76e-21,13;UBERON:0001262,1.76e-21,13;UBERON:0004786,1.76e-21,13;UBERON:0004923,1.44e-15,24;UBERON:0001007,7.13e-15,116;UBERON:0001555,7.13e-15,116;UBERON:0007026,7.13e-15,116;UBERON:0004119,1.58e-14,118;UBERON:0000925,1.58e-14,118;UBERON:0006595,1.58e-14,118;UBERON:0002108,5.59e-13,4;UBERON:0004921,1.33e-12,114;UBERON:0003350,3.79e-11,9;UBERON:0004808,3.79e-11,9;UBERON:0001277,3.79e-11,9;UBERON:0000331,5.77e-10,3;UBERON:0002116,5.77e-10,3;UBERON:0001204,5.77e-10,3;UBERON:0001168,5.77e-10,3;UBERON:0000485,5.23e-09,11;UBERON:0001155,5.29e-07,2;UBERON:0000059,5.29e-07,2|phase1_expression=0,4.88565570695105,3.18499467572675,5.14189159221611,3.50627010962443,1.84667199103079,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,1.83527424853736,2.29692785646008,1.7230479846363,2.15471232685889,7.22088993934221,6.30075324399827,2.21730510655305,0,0,0,1.44425809875637,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,7.66371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8775888853195,5.02456076660734,0,0,0.644337306610467,1.4117846723634,1.55664630691409,2.47293313946327,4.2707615539006,4.94096864172033,1.50801125280162,1.1937388322469,2.14460495831032,7.19055526923377,4.97117514711797,4.77939055810481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.16146342563582,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,3.88844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.0640251524048693,0.17230640686684,0.952587382566147,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p7@Isx}} | ||
|EntrezGene=71597 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=A1A546,B1Q2M1 | |||
|association_with_transcript=96bp_to_NM_027837,uc009mgv.1,uc012ggb.1_5end | |||
|description=CAGE_peak_7_at_Isx_5end | |||
|id=chr8:77397169..77397182,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.56e-14!9;CL:0002251!1.56e-14!9;CL:0000239!9.92e-11!6;CL:0000677!9.92e-11!6;CL:0000212!9.92e-11!6;CL:0000584!9.92e-11!6;CL:0000075!4.66e-09!7;CL:0002076!6.31e-08!15;CL:0000066!1.51e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.83e-12,6;CL:0000677,2.83e-12,6;CL:0000584,2.83e-12,6;CL:0002563,3.79e-11,9;CL:0002251,3.79e-11,9;CL:0000075,1.76e-10,7;CL:0000682,6.30e-09,3;CL:0000066,8.33e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.21e-33!43;UBERON:0005409!2.89e-27!59;UBERON:0000344!1.75e-24!15;UBERON:0001242!2.05e-21!13;UBERON:0000060!2.05e-21!13;UBERON:0001262!2.05e-21!13;UBERON:0004786!2.05e-21!13;UBERON:0003350!1.56e-14!9;UBERON:0004808!1.56e-14!9;UBERON:0001277!1.56e-14!9;UBERON:0004923!1.03e-13!24;UBERON:0000485!1.60e-11!11;UBERON:0001007!3.13e-09!128;UBERON:0001555!3.13e-09!128;UBERON:0007026!3.13e-09!128;UBERON:0004119!6.02e-09!130;UBERON:0000925!6.02e-09!130;UBERON:0006595!6.02e-09!130;UBERON:0004921!6.44e-08!126;UBERON:0004185!6.44e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.64e-55,31;UBERON:0005409,5.73e-38,47;UBERON:0000344,2.22e-26,15;UBERON:0001242,1.76e-21,13;UBERON:0001262,1.76e-21,13;UBERON:0004786,1.76e-21,13;UBERON:0004923,1.44e-15,24;UBERON:0001007,7.13e-15,116;UBERON:0001555,7.13e-15,116;UBERON:0007026,7.13e-15,116;UBERON:0004119,1.58e-14,118;UBERON:0000925,1.58e-14,118;UBERON:0006595,1.58e-14,118;UBERON:0002108,5.59e-13,4;UBERON:0004921,1.33e-12,114;UBERON:0003350,3.79e-11,9;UBERON:0004808,3.79e-11,9;UBERON:0001277,3.79e-11,9;UBERON:0000331,5.77e-10,3;UBERON:0002116,5.77e-10,3;UBERON:0001204,5.77e-10,3;UBERON:0001168,5.77e-10,3;UBERON:0000485,5.23e-09,11;UBERON:0001155,5.29e-07,2;UBERON:0000059,5.29e-07,2 | |||
|phase1_expression=0,4.88565570695105,3.18499467572675,5.14189159221611,3.50627010962443,1.84667199103079,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,1.83527424853736,2.29692785646008,1.7230479846363,2.15471232685889,7.22088993934221,6.30075324399827,2.21730510655305,0,0,0,1.44425809875637,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,7.66371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8775888853195,5.02456076660734,0,0,0.644337306610467,1.4117846723634,1.55664630691409,2.47293313946327,4.2707615539006,4.94096864172033,1.50801125280162,1.1937388322469,2.14460495831032,7.19055526923377,4.97117514711797,4.77939055810481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.16146342563582,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,3.88844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.0640251524048693,0.17230640686684,0.952587382566147,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p7@Isx | |||
}} |
Revision as of 16:06, 14 September 2013
Short description: | p7@Isx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Isx_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 96bp_to_NM_027837, uc009mgv.1, uc012ggb.1_5end |
EntrezGene: | Isx |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.83e-12 | 6 |
gut absorptive cell | 2.83e-12 | 6 |
enterocyte | 2.83e-12 | 6 |
intestinal epithelial cell | 3.79e-11 | 9 |
epithelial cell of alimentary canal | 3.79e-11 | 9 |
columnar/cuboidal epithelial cell | 1.76e-10 | 7 |
M cell of gut | 6.30e-09 | 3 |
epithelial cell | 8.33e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.64e-55 | 31 |
gastrointestinal system | 5.73e-38 | 47 |
mucosa | 2.22e-26 | 15 |
intestinal mucosa | 1.76e-21 | 13 |
wall of intestine | 1.76e-21 | 13 |
gastrointestinal system mucosa | 1.76e-21 | 13 |
organ component layer | 1.44e-15 | 24 |
digestive system | 7.13e-15 | 116 |
digestive tract | 7.13e-15 | 116 |
primitive gut | 7.13e-15 | 116 |
endoderm-derived structure | 1.58e-14 | 118 |
endoderm | 1.58e-14 | 118 |
presumptive endoderm | 1.58e-14 | 118 |
small intestine | 5.59e-13 | 4 |
subdivision of digestive tract | 1.33e-12 | 114 |
epithelium of mucosa | 3.79e-11 | 9 |
gastrointestinal system epithelium | 3.79e-11 | 9 |
intestinal epithelium | 3.79e-11 | 9 |
ileal mucosa | 5.77e-10 | 3 |
ileum | 5.77e-10 | 3 |
mucosa of small intestine | 5.77e-10 | 3 |
wall of small intestine | 5.77e-10 | 3 |
simple columnar epithelium | 5.23e-09 | 11 |
colon | 5.29e-07 | 2 |
large intestine | 5.29e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.