FFCP PHASE1:Mm9::chr9:102891087..102891118,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=24059|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=45bp_to_uc009rgc.1_5end|description=CAGE_peak_2_at_Slco2a1_5end|id=chr9:102891087..102891118,+|ontology_enrichment_celltype=CL:0002563!3.47e-08!9;CL:0002251!3.47e-08!9;CL:0000066!3.97e-08!25;CL:0000223!3.11e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,2.10e-14,25;CL:0002563,4.54e-13,9;CL:0002251,4.54e-13,9;CL:0000223,3.56e-12,20;CL:0000239,3.08e-10,6;CL:0000677,3.08e-10,6;CL:0000584,3.08e-10,6;CL:0000075,1.31e-08,7;CL:0000182,1.66e-07,5;CL:0002076,5.44e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.56e-17!130;UBERON:0000925!1.56e-17!130;UBERON:0006595!1.56e-17!130;UBERON:0001007!8.97e-17!128;UBERON:0001555!8.97e-17!128;UBERON:0007026!8.97e-17!128;UBERON:0004921!2.06e-15!126;UBERON:0004185!2.06e-15!126;UBERON:0000160!3.96e-14!43;UBERON:0005409!8.89e-14!59;UBERON:0000344!6.75e-13!15;UBERON:0001242!3.82e-11!13;UBERON:0000060!3.82e-11!13;UBERON:0001262!3.82e-11!13;UBERON:0004786!3.82e-11!13;UBERON:0003929!1.34e-10!55;UBERON:0004923!1.47e-10!24;UBERON:0003350!3.47e-08!9;UBERON:0004808!3.47e-08!9;UBERON:0001277!3.47e-08!9;UBERON:0000490!3.51e-07!66;UBERON:0007023!4.04e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.61e-33,31;UBERON:0005409,5.61e-24,47;UBERON:0000344,2.97e-21,15;UBERON:0001007,2.65e-20,116;UBERON:0001555,2.65e-20,116;UBERON:0007026,2.65e-20,116;UBERON:0004119,9.85e-20,118;UBERON:0000925,9.85e-20,118;UBERON:0006595,9.85e-20,118;UBERON:0004921,2.93e-18,114;UBERON:0001242,3.33e-18,13;UBERON:0001262,3.33e-18,13;UBERON:0004786,3.33e-18,13;UBERON:0004923,2.75e-13,24;UBERON:0003350,4.54e-13,9;UBERON:0004808,4.54e-13,9;UBERON:0001277,4.54e-13,9;UBERON:0003929,1.15e-10,55;UBERON:0000485,2.71e-10,11;UBERON:0000490,8.74e-08,66;UBERON:0005911,3.59e-07,69|phase1_expression=0,23.3813523118372,21.3849642513082,30.246421130683,28.0501608769954,6.71517087647559,10.0453435456076,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0.548457734422955,0,0.935476191661768,0,0,27.9986739888462,15.1410125504332,22.9692785646008,13.3536218809313,16.3758136841276,11.2113817479261,5.54466285471848,5.76499327703792,0,0,0,2.3108129580102,1.99481574430191,2.85837098767317,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,6.88339101585109,6.11974200336975,8.63525106620507,18.1937396885347,15.2329141613094,3.23022166303029,0,0,0,0,0,0,0,0,0.253359865475099,0,5.48082622651488,1.29468941823586,0.148442139064825,0,0,0.230615497256059,0,0,0.251333182659351,3.70792451601561,0.289198713839823,0,0,0,0,9.31958806090611,0,0,14.3055950916811,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,31.7202031664446,14.0158800331678,0,0,0.38660238396628,1.21010114774006,2.89091456998331,4.75564065281398,13.2868137232463,6.58795818896044,7.03738584640755,12.7332142106337,10.9179888786707,12.5834717211591,17.5071820398502,16.3295844068581,0,0,0,0,0,0.140271639780637,0.252946148497029,0.295220295959204,0.627994911365499,0.863780147452604,6.52195779591728,0,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0.549122826376163,0,1.48856379067401,0.624075346229121,1.51547326768267,6.45830688678884,1.92977408545347,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.34352118736169,1.93155722413313,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,2.41298144854057,0,0.162886959353576,7.58862565673663,1.32745138339963,0,0.302323556964751,0,0,0,1.80899805217755,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0.469343416127421,0.63549621259146,0,0.16488625294148,0,0,0,0,13.1166376483433,0,0.854354403989263,0,0,0,0.27338845544205,0,0.509935289981566,0.979660166265606,0.552799895217695,0.954670618015114,0,0,0.540026704109006,0,1.31017538247707,0.539457385539283,1.57041565878138,0.26175594198403,7.64728342421578,0.621339313086926,0,0,0,0,0,0,0,0.2604087696879,0,0,0,1.58005560314089,0,0.205421914329655,0.77952493786677,1.43221356533985,1.19208812868759,0.961563596159751,2.36303243479324,0.908698049533329,0.914481679859998,1.31074040677893,1.16949456887703,0.962118416403295,0.701261413089414,0.453460767230423,0,0,0,0,0.187682475451182,1.28206136987086,0.428736758158132,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.962757628775446,0,0,0,0.187283014939765,0.320125762024346,0.34461281373368,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0.887379030796687,0.476872379894642,0.436039249896986,0.188218760830661,0.338458431566706,0.548783918618318,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0,0.464810523557898,0,0,0.233931608445408,0.429742108096597,0,0,0|short_description=p2@Slco2a1}} | ||
|EntrezGene=24059 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt= | |||
|association_with_transcript=45bp_to_uc009rgc.1_5end | |||
|description=CAGE_peak_2_at_Slco2a1_5end | |||
|id=chr9:102891087..102891118,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.47e-08!9;CL:0002251!3.47e-08!9;CL:0000066!3.97e-08!25;CL:0000223!3.11e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.10e-14,25;CL:0002563,4.54e-13,9;CL:0002251,4.54e-13,9;CL:0000223,3.56e-12,20;CL:0000239,3.08e-10,6;CL:0000677,3.08e-10,6;CL:0000584,3.08e-10,6;CL:0000075,1.31e-08,7;CL:0000182,1.66e-07,5;CL:0002076,5.44e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.56e-17!130;UBERON:0000925!1.56e-17!130;UBERON:0006595!1.56e-17!130;UBERON:0001007!8.97e-17!128;UBERON:0001555!8.97e-17!128;UBERON:0007026!8.97e-17!128;UBERON:0004921!2.06e-15!126;UBERON:0004185!2.06e-15!126;UBERON:0000160!3.96e-14!43;UBERON:0005409!8.89e-14!59;UBERON:0000344!6.75e-13!15;UBERON:0001242!3.82e-11!13;UBERON:0000060!3.82e-11!13;UBERON:0001262!3.82e-11!13;UBERON:0004786!3.82e-11!13;UBERON:0003929!1.34e-10!55;UBERON:0004923!1.47e-10!24;UBERON:0003350!3.47e-08!9;UBERON:0004808!3.47e-08!9;UBERON:0001277!3.47e-08!9;UBERON:0000490!3.51e-07!66;UBERON:0007023!4.04e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.61e-33,31;UBERON:0005409,5.61e-24,47;UBERON:0000344,2.97e-21,15;UBERON:0001007,2.65e-20,116;UBERON:0001555,2.65e-20,116;UBERON:0007026,2.65e-20,116;UBERON:0004119,9.85e-20,118;UBERON:0000925,9.85e-20,118;UBERON:0006595,9.85e-20,118;UBERON:0004921,2.93e-18,114;UBERON:0001242,3.33e-18,13;UBERON:0001262,3.33e-18,13;UBERON:0004786,3.33e-18,13;UBERON:0004923,2.75e-13,24;UBERON:0003350,4.54e-13,9;UBERON:0004808,4.54e-13,9;UBERON:0001277,4.54e-13,9;UBERON:0003929,1.15e-10,55;UBERON:0000485,2.71e-10,11;UBERON:0000490,8.74e-08,66;UBERON:0005911,3.59e-07,69 | |||
|phase1_expression=0,23.3813523118372,21.3849642513082,30.246421130683,28.0501608769954,6.71517087647559,10.0453435456076,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0.548457734422955,0,0.935476191661768,0,0,27.9986739888462,15.1410125504332,22.9692785646008,13.3536218809313,16.3758136841276,11.2113817479261,5.54466285471848,5.76499327703792,0,0,0,2.3108129580102,1.99481574430191,2.85837098767317,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,6.88339101585109,6.11974200336975,8.63525106620507,18.1937396885347,15.2329141613094,3.23022166303029,0,0,0,0,0,0,0,0,0.253359865475099,0,5.48082622651488,1.29468941823586,0.148442139064825,0,0,0.230615497256059,0,0,0.251333182659351,3.70792451601561,0.289198713839823,0,0,0,0,9.31958806090611,0,0,14.3055950916811,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,31.7202031664446,14.0158800331678,0,0,0.38660238396628,1.21010114774006,2.89091456998331,4.75564065281398,13.2868137232463,6.58795818896044,7.03738584640755,12.7332142106337,10.9179888786707,12.5834717211591,17.5071820398502,16.3295844068581,0,0,0,0,0,0.140271639780637,0.252946148497029,0.295220295959204,0.627994911365499,0.863780147452604,6.52195779591728,0,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0.549122826376163,0,1.48856379067401,0.624075346229121,1.51547326768267,6.45830688678884,1.92977408545347,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.34352118736169,1.93155722413313,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,2.41298144854057,0,0.162886959353576,7.58862565673663,1.32745138339963,0,0.302323556964751,0,0,0,1.80899805217755,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0.469343416127421,0.63549621259146,0,0.16488625294148,0,0,0,0,13.1166376483433,0,0.854354403989263,0,0,0,0.27338845544205,0,0.509935289981566,0.979660166265606,0.552799895217695,0.954670618015114,0,0,0.540026704109006,0,1.31017538247707,0.539457385539283,1.57041565878138,0.26175594198403,7.64728342421578,0.621339313086926,0,0,0,0,0,0,0,0.2604087696879,0,0,0,1.58005560314089,0,0.205421914329655,0.77952493786677,1.43221356533985,1.19208812868759,0.961563596159751,2.36303243479324,0.908698049533329,0.914481679859998,1.31074040677893,1.16949456887703,0.962118416403295,0.701261413089414,0.453460767230423,0,0,0,0,0.187682475451182,1.28206136987086,0.428736758158132,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.962757628775446,0,0,0,0.187283014939765,0.320125762024346,0.34461281373368,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0.887379030796687,0.476872379894642,0.436039249896986,0.188218760830661,0.338458431566706,0.548783918618318,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0,0.464810523557898,0,0,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p2@Slco2a1 | |||
}} |
Revision as of 16:37, 14 September 2013
Short description: | p2@Slco2a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slco2a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 45bp_to_uc009rgc.1_5end |
EntrezGene: | Slco2a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.10e-14 | 25 |
intestinal epithelial cell | 4.54e-13 | 9 |
epithelial cell of alimentary canal | 4.54e-13 | 9 |
endodermal cell | 3.56e-12 | 20 |
brush border epithelial cell | 3.08e-10 | 6 |
gut absorptive cell | 3.08e-10 | 6 |
enterocyte | 3.08e-10 | 6 |
columnar/cuboidal epithelial cell | 1.31e-08 | 7 |
hepatocyte | 1.66e-07 | 5 |
endo-epithelial cell | 5.44e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.61e-33 | 31 |
gastrointestinal system | 5.61e-24 | 47 |
mucosa | 2.97e-21 | 15 |
digestive system | 2.65e-20 | 116 |
digestive tract | 2.65e-20 | 116 |
primitive gut | 2.65e-20 | 116 |
endoderm-derived structure | 9.85e-20 | 118 |
endoderm | 9.85e-20 | 118 |
presumptive endoderm | 9.85e-20 | 118 |
subdivision of digestive tract | 2.93e-18 | 114 |
intestinal mucosa | 3.33e-18 | 13 |
wall of intestine | 3.33e-18 | 13 |
gastrointestinal system mucosa | 3.33e-18 | 13 |
organ component layer | 2.75e-13 | 24 |
epithelium of mucosa | 4.54e-13 | 9 |
gastrointestinal system epithelium | 4.54e-13 | 9 |
intestinal epithelium | 4.54e-13 | 9 |
gut epithelium | 1.15e-10 | 55 |
simple columnar epithelium | 2.71e-10 | 11 |
unilaminar epithelium | 8.74e-08 | 66 |
endo-epithelium | 3.59e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.