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FFCP PHASE1:Mm9::chr9:21069731..21069766,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=235040|HGNC=|MCL_coexpression_id=562|UniProt=Q8BGV9|association_with_transcript=0bp_to_ENSMUST00000065005,NM_153583,uc009okt.1_5end|description=CAGE_peak_1_at_Atg4d_5end|id=chr9:21069731..21069766,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.24e-10!128;UBERON:0001555!1.24e-10!128;UBERON:0007026!1.24e-10!128;UBERON:0004119!1.57e-10!130;UBERON:0000925!1.57e-10!130;UBERON:0006595!1.57e-10!130;UBERON:0004921!8.67e-10!126;UBERON:0004185!8.67e-10!126;UBERON:0004923!8.68e-10!24;UBERON:0000344!2.40e-09!15;UBERON:0005409!8.08e-09!59;UBERON:0001242!3.28e-08!13;UBERON:0000060!3.28e-08!13;UBERON:0001262!3.28e-08!13;UBERON:0004786!3.28e-08!13;UBERON:0000160!1.26e-07!43;UBERON:0000481!3.96e-07!230;UBERON:0009854!4.24e-07!23;UBERON:0009856!4.24e-07!23;UBERON:0003929!7.12e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.40e-10,116;UBERON:0001555,1.40e-10,116;UBERON:0007026,1.40e-10,116;UBERON:0004119,1.85e-10,118;UBERON:0000925,1.85e-10,118;UBERON:0006595,1.85e-10,118;UBERON:0004923,8.68e-10,24;UBERON:0004921,9.92e-10,114;UBERON:0005409,1.34e-09,47;UBERON:0000344,2.40e-09,15;UBERON:0000160,8.08e-09,31;UBERON:0001242,3.28e-08,13;UBERON:0001262,3.28e-08,13;UBERON:0004786,3.28e-08,13;UBERON:0011216,8.80e-08,194;UBERON:0009854,4.24e-07,23;UBERON:0009856,4.24e-07,23;UBERON:0003929,7.12e-07,55|phase1_expression=13.2923543096979,122.141392673776,132.859777901745,142.460643525517,196.852021868914,50.8674193893026,41.8166626665991,33.3138174479267,24.2156602100867,30.1943238955372,19.5188483777076,15.9544317990673,29.960127737961,34.793320162761,45.6360373687458,84.0272359667778,131.517633088092,24.7637799806217,25.5032846506674,29.7072756258621,21.0056926673142,16.8794617041505,12.27639008953,47.3577571468484,59.417003796397,101.639057648359,71.5064913624064,61.8402437808502,80.7599532689589,69.308285683981,59.2020463449664,41.276993774876,39.9792111929971,15.8481681015439,24.5523876788583,27.2624818387927,26.9503550266327,43.9458212273753,40.6294379152376,29.8408534065065,48.8232135065742,59.4249571913848,48.0655249500842,7.67970589651021,7.80602370390262,7.15832333430558,19.559783608701,18.532138292338,12.9614847813338,13.2212331370513,13.4386964760348,27.3129872293446,29.5297386661616,15.9579671242496,19.4934403502629,8.48956138918625,6.87680255853016,11.8604581223812,17.8038485556446,13.7537654610729,17.1134478946668,10.5041804941431,8.89294796111139,13.9484456178617,14.8329954385046,14.209602298922,19.7736072942147,21.5162250980071,18.3530613786005,16.605730414798,21.453146057841,17.424710048632,20.9825113904033,17.7611658861683,17.1563393122643,21.1420320920305,22.0231761998777,20.0469120793745,20.7368819895929,18.9916254331479,17.0167017100482,20.8365348222704,33.5019598801657,23.0732670112989,19.5581757154317,17.0884579574727,17.3693450574906,17.1487490159277,15.9782267933018,11.7135918165518,15.0729534124872,35.2773789562368,26.5188820146023,36.6998170313716,31.1892680374881,35.8421509677868,28.7911061270091,6.64678258054425,5.97507810586598,8.48014978824817,17.4645840523084,7.69958864485907,2.54805239706646,7.11066703153331,23.5975234702223,20.522149103483,19.2099289105618,27.5183150122935,9.32176381129818,13.0629082377046,16.8280766963152,14.3098774806706,12.4532368518272,13.7157602902887,8.46638691377075,14.4516580029127,22.494742063828,14.1707369781513,30.9613693182456,12.4560474459505,27.6051898075492,29.0925151881133,33.550517019262,30.1564220921894,41.4704479490641,48.792297544841,7.30872259486114,12.5979573508616,7.37007317023775,21.7196427136993,19.2150253183823,16.4607201267852,13.7321212951898,20.2015211290961,19.1165000994795,20.766881672673,8.24898847187562,24.6325801807984,11.3725241295154,16.414464759145,12.3614420814569,19.7715809812787,10.6236656585156,12.3577950625286,13.5392633311142,14.2206229516183,20.052169055782,18.6266426932091,7.54487975264948,10.2117283290622,12.1406275673125,10.9597866213787,14.1804097105055,16.3678518265418,14.1989674121481,11.9420560091096,9.12877143507205,9.00717674901503,5.96743348730745,15.1201813950916,9.85009451920604,16.7457717158744,13.9679393995274,16.7249596985293,16.9693824176116,21.8581908065383,27.9004337455604,18.4489240940128,25.6713365865029,26.4309617167343,27.3201888169534,38.0119967305864,27.6633145266724,35.2962881339778,13.0379768109759,12.0398396483763,68.72710686063,30.147364599644,8.95810652247983,8.59275685883622,14.3042882067524,11.2942773789072,16.9007313322101,26.6315876557583,51.2491386468073,23.7166494802576,31.668236308834,24.0737331169792,28.0748285451533,38.6492345721315,43.2276099749388,47.5947643077938,13.845756769575,14.0525670509966,9.01661885384643,14.6628956048626,17.0678188707511,17.2534116930184,16.3150265780584,20.9606410131035,21.1948282585856,30.4790994886847,28.4594522003663,33.3690211432188,37.739327061735,41.8243529035828,49.7007297401832,61.7413528966187,65.4388439078249,34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|EntrezGene=235040
|HGNC=
|MCL_coexpression_id=562
|UniProt=Q8BGV9
|association_with_transcript=0bp_to_ENSMUST00000065005,NM_153583,uc009okt.1_5end
|description=CAGE_peak_1_at_Atg4d_5end
|id=chr9:21069731..21069766,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!1.24e-10!128;UBERON:0001555!1.24e-10!128;UBERON:0007026!1.24e-10!128;UBERON:0004119!1.57e-10!130;UBERON:0000925!1.57e-10!130;UBERON:0006595!1.57e-10!130;UBERON:0004921!8.67e-10!126;UBERON:0004185!8.67e-10!126;UBERON:0004923!8.68e-10!24;UBERON:0000344!2.40e-09!15;UBERON:0005409!8.08e-09!59;UBERON:0001242!3.28e-08!13;UBERON:0000060!3.28e-08!13;UBERON:0001262!3.28e-08!13;UBERON:0004786!3.28e-08!13;UBERON:0000160!1.26e-07!43;UBERON:0000481!3.96e-07!230;UBERON:0009854!4.24e-07!23;UBERON:0009856!4.24e-07!23;UBERON:0003929!7.12e-07!55
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.40e-10,116;UBERON:0001555,1.40e-10,116;UBERON:0007026,1.40e-10,116;UBERON:0004119,1.85e-10,118;UBERON:0000925,1.85e-10,118;UBERON:0006595,1.85e-10,118;UBERON:0004923,8.68e-10,24;UBERON:0004921,9.92e-10,114;UBERON:0005409,1.34e-09,47;UBERON:0000344,2.40e-09,15;UBERON:0000160,8.08e-09,31;UBERON:0001242,3.28e-08,13;UBERON:0001262,3.28e-08,13;UBERON:0004786,3.28e-08,13;UBERON:0011216,8.80e-08,194;UBERON:0009854,4.24e-07,23;UBERON:0009856,4.24e-07,23;UBERON:0003929,7.12e-07,55
|phase1_expression=13.2923543096979,122.141392673776,132.859777901745,142.460643525517,196.852021868914,50.8674193893026,41.8166626665991,33.3138174479267,24.2156602100867,30.1943238955372,19.5188483777076,15.9544317990673,29.960127737961,34.793320162761,45.6360373687458,84.0272359667778,131.517633088092,24.7637799806217,25.5032846506674,29.7072756258621,21.0056926673142,16.8794617041505,12.27639008953,47.3577571468484,59.417003796397,101.639057648359,71.5064913624064,61.8402437808502,80.7599532689589,69.308285683981,59.2020463449664,41.276993774876,39.9792111929971,15.8481681015439,24.5523876788583,27.2624818387927,26.9503550266327,43.9458212273753,40.6294379152376,29.8408534065065,48.8232135065742,59.4249571913848,48.0655249500842,7.67970589651021,7.80602370390262,7.15832333430558,19.559783608701,18.532138292338,12.9614847813338,13.2212331370513,13.4386964760348,27.3129872293446,29.5297386661616,15.9579671242496,19.4934403502629,8.48956138918625,6.87680255853016,11.8604581223812,17.8038485556446,13.7537654610729,17.1134478946668,10.5041804941431,8.89294796111139,13.9484456178617,14.8329954385046,14.209602298922,19.7736072942147,21.5162250980071,18.3530613786005,16.605730414798,21.453146057841,17.424710048632,20.9825113904033,17.7611658861683,17.1563393122643,21.1420320920305,22.0231761998777,20.0469120793745,20.7368819895929,18.9916254331479,17.0167017100482,20.8365348222704,33.5019598801657,23.0732670112989,19.5581757154317,17.0884579574727,17.3693450574906,17.1487490159277,15.9782267933018,11.7135918165518,15.0729534124872,35.2773789562368,26.5188820146023,36.6998170313716,31.1892680374881,35.8421509677868,28.7911061270091,6.64678258054425,5.97507810586598,8.48014978824817,17.4645840523084,7.69958864485907,2.54805239706646,7.11066703153331,23.5975234702223,20.522149103483,19.2099289105618,27.5183150122935,9.32176381129818,13.0629082377046,16.8280766963152,14.3098774806706,12.4532368518272,13.7157602902887,8.46638691377075,14.4516580029127,22.494742063828,14.1707369781513,30.9613693182456,12.4560474459505,27.6051898075492,29.0925151881133,33.550517019262,30.1564220921894,41.4704479490641,48.792297544841,7.30872259486114,12.5979573508616,7.37007317023775,21.7196427136993,19.2150253183823,16.4607201267852,13.7321212951898,20.2015211290961,19.1165000994795,20.766881672673,8.24898847187562,24.6325801807984,11.3725241295154,16.414464759145,12.3614420814569,19.7715809812787,10.6236656585156,12.3577950625286,13.5392633311142,14.2206229516183,20.052169055782,18.6266426932091,7.54487975264948,10.2117283290622,12.1406275673125,10.9597866213787,14.1804097105055,16.3678518265418,14.1989674121481,11.9420560091096,9.12877143507205,9.00717674901503,5.96743348730745,15.1201813950916,9.85009451920604,16.7457717158744,13.9679393995274,16.7249596985293,16.9693824176116,21.8581908065383,27.9004337455604,18.4489240940128,25.6713365865029,26.4309617167343,27.3201888169534,38.0119967305864,27.6633145266724,35.2962881339778,13.0379768109759,12.0398396483763,68.72710686063,30.147364599644,8.95810652247983,8.59275685883622,14.3042882067524,11.2942773789072,16.9007313322101,26.6315876557583,51.2491386468073,23.7166494802576,31.668236308834,24.0737331169792,28.0748285451533,38.6492345721315,43.2276099749388,47.5947643077938,13.845756769575,14.0525670509966,9.01661885384643,14.6628956048626,17.0678188707511,17.2534116930184,16.3150265780584,20.9606410131035,21.1948282585856,30.4790994886847,28.4594522003663,33.3690211432188,37.739327061735,41.8243529035828,49.7007297401832,61.7413528966187,65.4388439078249,34.8112326315481,57.2337350515875,31.0254396902532,21.5652309791032,21.9563159124417,14.6657706363843,19.1959947239805,15.2487801493625,38.5954817090694,17.1820466854942,13.6433816474749,10.9186534216157,9.67546988918572,12.9079636558676,8.87783164441623,14.9967493758189,20.2938993772111,11.3497303756458,12.4020226203314,12.5969267239415,19.8274610806043,17.0958132047237,20.8294644357377,15.0791283939272,14.1415477792864,11.8023425524569,11.5893433447988,16.0550589987792,19.1055049145291,4.26230857979356,33.0736914637729,15.7754109708128,12.4940398174924,15.2950612390287,10.5146271099123,11.5855310522845,10.190755108398,13.3587531552715,15.1973046113882,10.2774822266096,15.7447445046685,8.80028528291265,15.8478387263857,7.4928001302645,14.1874305756381,13.2745138339963,16.0235219862288,19.9533547596736,15.8428266994954,25.3959627877465,17.2163682848599,20.6742634534577,16.3590178264877,14.6163925137736,17.3820216864699,27.4088382294997,21.6584640821192,20.4263763452273,11.5239100180039,19.9212373025442,21.8623775732224,13.3005175231705,19.9773075714319,13.4930196893739,23.1393361327095,13.1416156515678,23.9370240076117,16.9806866502321,16.9832840529724,12.9171541356724,13.0275917844817,16.2346387844266,17.0706535734864,41.098797964809,16.6882771809459,44.5972998882396,14.2406938894624,18.5194527369712,52.9315364183182,42.9219875044019,58.7959905140763,10.0287273696375,10.7762618289217,11.746997773376,32.4588010125139,12.1789357528737,17.2821547057821,15.1207477150522,15.8907104970996,16.1588297172171,19.8250589185686,16.9439584236939,35.8605640518121,43.6802459993342,30.4456263412594,34.3852692597356,10.7651913151665,13.4021377270249,13.2226808073952,10.7202653486517,9.63049915297436,10.5621514781179,10.54655517236,14.3657301863224,21.0178185118625,22.1783104818556,16.7485893932934,16.4207424385033,9.65482997349376,11.5629532450238,14.143108957731,15.6958270277199,16.4667765842357,18.4611908968222,17.1642964911851,19.66135611699,20.871020323326,18.2246236983337,24.822655143205,25.9466722843083,24.713611814058,10.211353855207,10.1376657968708,11.0803846800292,13.7164611762855,15.9530104133505,12.454310450174,18.6500489798787,20.0628841614145,14.1187960654267,18.4130094602871,9.73922372846974,13.9201077698387,18.4972280338073,18.1294535373528,19.5756525067224,14.4102785031751,16.7662691324156,15.5328093525546,10.3787347584177,14.7639203158381,20.1465654789878,17.5036836289172,15.7209871970987,16.3620722520513,16.4462578573195,17.1009097508282,15.4041220604071,11.8767689528985,14.4483200937437,13.0152175556393,15.0762827026511,14.6617599007151,14.703480052637,15.7176918123414,14.8331937209415,17.3618298417335,16.8955219329356,11.9231125308862,14.057639347802,14.198064492747,14.7830437767339,14.8253344964975,15.7162665293602,16.4152339309852,17.5610853957862,13.9426947062057,16.1606895476576,20.2011217796786,15.7784574105152,15.1696902858368,16.3692417267876,13.634442024365,15.2396222675102,18.7357933453459,18.9484602840781,19.7681369724434,10.9034349279241,19.8532277207564,17.8538233427725
|short_description=p1@Atg4d
}}

Revision as of 17:26, 14 September 2013

Short description:p1@Atg4d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Atg4d_5end
Coexpression cluster:MCL_coexpression_mm9:562
Association with transcript: 0bp_to_ENSMUST00000065005, NM_153583, uc009okt.1_5end
EntrezGene:Atg4d
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Atg4d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5122.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6132.86
CD326+ enterocyte, pool1.CNhs13542.11848-124I3142.46
CD326+ enterocyte, pool2.CNhs13197.11849-124I4196.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I750.87
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I841.82
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E933.31
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E724.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F230.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E619.52
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E429.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E834.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A145.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A384.03
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5131.52
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A224.76
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A425.50
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A629.71
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H216.88
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.28
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D147.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D259.42
GP2+ M cell, pool1.CNhs13228.11845-124H9101.64
GP2+ M cell, pool2.CNhs13231.11846-124I171.51
GP2+ M cell, pool3.CNhs13240.11847-124I261.84
Ileum epithelium, pool1.CNhs13199.10252-104B980.76
Ileum epithelium, pool2.CNhs13232.10253-104C169.31
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C859.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I341.28
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G639.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F524.55
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F627.26
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F726.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G843.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H140.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H329.84
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G948.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H259.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H448.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.16
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B719.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C218.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.96
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C427.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A229.53
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.49
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.49
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.86
Mouse Granule cells, donor1.CNhs12131.11713-123C317.80
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.50
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E714.83
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.21
Mouse Microglia, donor1.CNhs12629.11718-123C819.77
Mouse Microglia, donor2.CNhs12634.11736-123E821.52
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.61
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.45
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.74
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.99
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E433.50
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.56
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.09
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.37
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E117.15
Mouse Schwann, donor1.CNhs12507.11728-123D915.98
Mouse Schwann, donor2.CNhs12573.11746-123F911.71
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.07
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F735.28
Mouse hepatocyte, donor1.CNhs13078.11714-123C426.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C836.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F431.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F635.84
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A728.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G123.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G220.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G319.21
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B627.52
accessory axillary lymph node, adult.CNhs10475.1063-29H99.32
adrenal gland, adult.CNhs10508.49-24D713.06
adrenal gland, embryo E14.CNhs11038.406-44C516.83
adrenal gland, embryo E16.CNhs11004.1254-43D614.31
adrenal gland, embryo E17.CNhs11043.1263-45I112.45
adrenal gland, embryo E18.CNhs11026.1262-18F513.72
adrenal gland, neonate N00.CNhs11191.1311-23C18.47
adrenal gland, neonate N25.CNhs11223.1377-27I314.45
amnion, adult pregnant day17.5.CNhs10488.583-22A822.49
aorta, adult.CNhs10498.46-23H114.17
bone (os femoris), adult.CNhs10483.56-12G230.96
bone (os femoris), neonate N02.CNhs11227.1985-43F512.46
bone (os femoris), neonate N16.CNhs11225.1525-43A627.61
bone (os femoris), neonate N20.CNhs11195.1350-25C329.09
cecum, adult.CNhs10467.37-13H433.55
cerebellum, adult.CNhs10494.15-8B230.16
cerebellum, neonate N30.CNhs11135.1395-42I241.47
colon, adult.CNhs10468.36-18H748.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.31
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.37
corpora quadrigemina, adult.CNhs10501.16-22A421.72
corpus striatum, adult.CNhs10487.19-21D819.22
corpus striatum, neonate N00.CNhs11226.630-43F116.46
cortex, adult.CNhs10473.12-14D513.73
cortex, neonate N30.CNhs11107.1392-42F220.20
diencephalon, adult.CNhs10482.20-12F219.12
diencephalon, neonate N30.CNhs11201.1388-42B220.77
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.25
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A224.63
epididymis, adult.CNhs10490.58-23B211.37
eyeball, adult.CNhs10484.31-12G416.41
eyeball, embryo E12.CNhs11016.345-16C612.36
eyeball, embryo E14.CNhs10521.399-16E219.77
eyeball, embryo E15.CNhs10593.426-16C910.62
eyeball, embryo E17.CNhs11023.1261-18D412.36
eyeball, neonate N00.CNhs11207.633-15C613.54
eyeball, neonate N01.CNhs11140.1532-43E714.22
eyeball, neonate N02.CNhs11205.1551-44G820.05
eyeball, neonate N16.CNhs11188.777-19A218.63
forelimb, embryo E11.CNhs10596.335-25E27.54
forelimb, embryo E12.CNhs10600.359-14H210.21
forelimb, embryo E13.CNhs10589.384-1E212.14
forelimb, embryo E14.CNhs10577.413-26A810.96
forelimb, embryo E15.CNhs11007.437-20E714.18
forelimb, embryo E17.CNhs10598.1517-43C416.37
forelimb, embryo E18.CNhs11008.1520-43B514.20
gonad, embryo E13.CNhs11044.1564-45I611.94
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.13
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.01
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.97
heart, embryo E11.CNhs10586.331-24E915.12
heart, embryo E12.CNhs11015.353-12F59.85
heart, embryo E13.CNhs11013.376-3I916.75
heart, embryo E14.CNhs10597.403-26D413.97
heart, embryo E15.CNhs11017.431-16C816.72
heart, embryo E16.CNhs11021.457-17C616.97
heart, embryo E17.CNhs11025.479-18E521.86
heart, embryo E18.CNhs11030.1283-20G327.90
heart, neonate N00.CNhs11213.639-21E318.45
heart, neonate N03.CNhs11221.1349-25I225.67
heart, neonate N10.CNhs11118.749-24G126.43
heart, neonate N16.CNhs11209.782-15G127.32
heart, neonate N20.CNhs11127.821-26I638.01
heart, neonate N25.CNhs11196.1351-25D327.66
heart, neonate N30.CNhs11202.1390-42D235.30
hippocampus, adult.CNhs10478.13-16E813.04
hippocampus, neonate N00.CNhs11228.627-43G112.04
intestinal mucosa, adult.CNhs10506.860-29I368.73
intestine, adult.CNhs10496.178-9A330.15
intestine, embryo E12.CNhs11019.1251-16I58.96
intestine, embryo E13.CNhs11010.381-16D58.59
intestine, embryo E15.CNhs10602.976-16D814.30
intestine, embryo E16.CNhs10585.463-22H411.29
intestine, embryo E17.CNhs10582.482-18D316.90
intestine, embryo E18.CNhs10526.1289-20F726.63
intestine, neonate N00.CNhs11126.644-26D151.25
intestine, neonate N01.CNhs11192.1322-23E923.72
intestine, neonate N06.CNhs11102.688-20B831.67
intestine, neonate N07.CNhs11095.720-20F224.07
intestine, neonate N10.CNhs11098.755-23A528.07
intestine, neonate N20.CNhs11187.827-18D138.65
intestine, neonate N25.CNhs11121.1352-25E343.23
intestine, neonate N30.CNhs11131.1384-42G147.59
kidney, embryo E14.CNhs10606.411-4I913.85
kidney, embryo E15.CNhs10997.434-16F814.05
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I214.66
kidney, embryo E18.CNhs11001.1288-20C717.07
kidney, neonate N00.CNhs11214.646-21G717.25
kidney, neonate N10.CNhs11206.758-6D516.32
kidney, neonate N20.CNhs11113.832-19I120.96
kidney, neonate N25.CNhs11122.1353-25F321.19
kidney, neonate N30.CNhs11203.1385-42H130.48
liver, adult pregnant day01.CNhs10466.508-5B228.46
liver, embryo E12.CNhs10601.355-15F833.37
liver, embryo E13.CNhs10524.378-3H637.74
liver, embryo E14.CNhs10594.409-16E141.82
liver, embryo E15.CNhs10520.433-16D749.70
liver, embryo E16.CNhs10523.462-17F561.74
liver, embryo E17.CNhs10510.481-18A365.44
liver, embryo E18.CNhs10579.499-43G434.81
liver, neonate N00.CNhs11117.641-24F457.23
liver, neonate N03.CNhs11123.1345-25G231.03
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H221.96
liver, neonate N10.CNhs11115.751-24B914.67
liver, neonate N20.CNhs11220.823-25A319.20
liver, neonate N25.CNhs11198.1368-26H115.25
liver, neonate N30.CNhs11106.1382-42D138.60
lung, adult.CNhs10474.28-22B117.18
lung, embryo E12.CNhs10522.354-16G213.64
lung, embryo E14.CNhs10604.404-26F810.92
lung, embryo E15.CNhs11020.432-17C59.68
lung, embryo E16.CNhs10998.458-17B612.91
lung, embryo E17.CNhs10605.480-44A68.88
lung, embryo E18.CNhs10583.1287-20I615.00
lung, neonate N00.CNhs11224.640-42C620.29
lung, neonate N06.CNhs11212.683-20E511.35
lung, neonate N07.CNhs11111.715-19A312.40
lung, neonate N10.CNhs11219.750-23E612.60
lung, neonate N20.CNhs11109.822-18A419.83
lung, neonate N25.CNhs11119.1359-25C717.10
lung, neonate N30.CNhs11133.1394-42H220.83
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H211.59
medulla oblongata, adult.CNhs10477.17-12C216.06
medulla oblongata, neonate N30.CNhs11200.1396-42A319.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C233.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.78
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.30
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.51
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.59
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.20
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.28
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I78.80
ovary, embryo E18.CNhs11040.505-44H715.85
ovary, neonate N00.CNhs11217.1299-22I47.49
oviduct, adult pregnant day01.CNhs10500.988-6G614.19
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F416.02
pancreas, embryo E15.CNhs11042.1556-45F219.95
pancreas, embryo E16.CNhs11003.460-26E515.84
pancreas, embryo E17.CNhs10599.1558-45G325.40
pancreas, embryo E18.CNhs10580.1535-43I717.22
pancreas, neonate N00.CNhs11105.645-26G920.67
pancreas, neonate N01.CNhs11138.1531-43D716.36
pancreas, neonate N02.CNhs11139.1539-43D814.62
pancreas, neonate N16.CNhs11136.787-43B617.38
pancreas, neonate N25.CNhs11094.1555-45E227.41
pancreas, neonate N30.CNhs11182.1548-44H521.66
pituitary gland, adult.CNhs10493.21-1G820.43
pituitary gland, embryo E12.CNhs11018.346-16E611.52
pituitary gland, embryo E13.CNhs11009.370-44C719.92
pituitary gland, embryo E14.CNhs11037.398-44A521.86
pituitary gland, embryo E15.CNhs10592.427-16B913.30
pituitary gland, embryo E16.CNhs11036.449-43F619.98
pituitary gland, embryo E17.CNhs11039.1265-44F513.49
pituitary gland, neonate N00.CNhs11190.1308-22E923.14
placenta, adult pregnant day10.CNhs10472.539-13I713.14
placenta, adult pregnant day17.CNhs10464.577-18G323.94
prostate, adult.CNhs10470.859-1F816.98
skin, adult.CNhs10492.30-1C316.98
skin, neonate N00.CNhs11124.650-25G412.92
skin, neonate N03.CNhs11215.662-22H313.03
skin, neonate N06.CNhs11097.693-20I516.23
skin, neonate N10.CNhs11108.762-6C417.07
small intestine, neonate N16.CNhs11114.790-21I141.10
spinal cord, adult.CNhs10505.24-13C916.69
spleen, adult.CNhs10465.25-2G244.60
spleen, embryo E16.CNhs11035.461-43C114.24
spleen, embryo E18.CNhs11011.1271-21F218.52
spleen, neonate N10.CNhs11116.752-24D152.93
spleen, neonate N20.CNhs11112.824-19H142.92
spleen, neonate N25.CNhs11099.1354-25G358.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.75
stomach, adult.CNhs10503.33-1H632.46
stomach, embryo E12.CNhs10588.356-43E312.18
stomach, embryo E15.CNhs10603.1252-16G817.28
stomach, embryo E16.CNhs11022.459-17D415.12
stomach, embryo E17.CNhs11006.1035-18D515.89
stomach, embryo E18.CNhs10999.1286-20C616.16
stomach, neonate N03.CNhs11193.1340-24B819.83
stomach, neonate N07.CNhs11210.718-18A916.94
stomach, neonate N25.CNhs11104.1355-25E435.86
stomach, neonate N30.CNhs11134.1386-42I143.68
submandibular gland, adult.CNhs10469.59-29C130.45
testis, adult.CNhs10504.57-7G534.39
testis, embryo E13.CNhs11031.389-23F510.77
testis, embryo E15.CNhs11034.443-27C513.40
testis, embryo E16.CNhs11033.470-26G513.22
testis, embryo E17.CNhs11029.486-18I510.72
testis, embryo E18.CNhs11027.503-18G59.63
testis, neonate N00.CNhs11189.1300-22B710.56
testis, neonate N07.CNhs11222.726-26I410.55
testis, neonate N10.CNhs11204.763-44D914.37
testis, neonate N20.CNhs11110.839-18H321.02
testis, neonate N30.CNhs11130.1391-42E222.18
thymus, adult.CNhs10471.38-12B516.75
thymus, embryo E14.CNhs11041.402-44I416.42
thymus, embryo E15.CNhs11005.430-45I29.65
thymus, embryo E16.CNhs11002.456-26C511.56
thymus, embryo E17.CNhs10581.478-18C114.14
thymus, embryo E18.CNhs10595.1273-19G415.70
thymus, neonate N02.CNhs11181.1541-43F816.47
thymus, neonate N03.CNhs11137.2104-43C718.46
thymus, neonate N06.CNhs11197.681-26C417.16
thymus, neonate N07.CNhs11211.713-19D319.66
thymus, neonate N10.CNhs11194.748-24E420.87
thymus, neonate N20.CNhs11186.820-7A218.22
thymus, neonate N25.CNhs11125.1362-25G724.82
thymus, neonate N30.CNhs11132.1393-42G225.95
tongue, adult.CNhs10499.32-1B424.71
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H310.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.08
urinary bladder, adult.CNhs10481.879-12E413.72
uterus, adult pregnant day19.CNhs10497.590-15F515.95
uterus, adult.CNhs10509.92-27E512.45
vagina, adult.CNhs10502.89-27D518.65
vesicular gland, adult.CNhs10491.51-27F820.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.41
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.53
whole body, embryo E11.CNhs11014.324-5I810.38
whole body, embryo E12.CNhs10587.857-27C914.76
whole body, embryo E13.CNhs10512.372-23H220.15
whole body, embryo E14.5.CNhs10578.420-27D217.50
whole body, embryo E14.CNhs10519.395-14B115.72
whole body, embryo E16.CNhs10514.453-14F216.36
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.10
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.40
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.88
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.83
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.36
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.90
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.20
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.83
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.20
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.63
whole body, embryo E17.5.CNhs10513.490-9F915.24
whole body, embryo E17.CNhs10517.475-3I518.74
whole body, embryo E18.CNhs10516.493-3B318.95
whole body, neonate N00.CNhs10525.657-19C219.77
whole body, neonate N01.CNhs10576.659-23C610.90
whole body, neonate N06.CNhs10515.692-21D119.85
whole body, neonate N10.CNhs10518.761-6B417.85





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive system1.40e-10116
digestive tract1.40e-10116
primitive gut1.40e-10116
endoderm-derived structure1.85e-10118
endoderm1.85e-10118
presumptive endoderm1.85e-10118
organ component layer8.68e-1024
subdivision of digestive tract9.92e-10114
gastrointestinal system1.34e-0947
mucosa2.40e-0915
intestine8.08e-0931
intestinal mucosa3.28e-0813
wall of intestine3.28e-0813
gastrointestinal system mucosa3.28e-0813
organ system subdivision8.80e-08194
digestive tract diverticulum4.24e-0723
sac4.24e-0723
gut epithelium7.12e-0755







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