FFCP PHASE1:Mm9::chr9:44249274..44249313,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=382074|HGNC=|MCL_coexpression_id=2933|UniProt=Q3UTB7,E9QND0|association_with_transcript=-323bp_to_ENSMUST00000098837,ENSMUST00000114742,NM_001033469,uc009pdr.1_5end|description=CAGE_peak_1_at_Foxr1_5end|id=chr9:44249274..44249313,-|ontology_enrichment_celltype=CL:0002679!2.44e-08!1|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!6.15e-42!14;UBERON:0000991!3.45e-40!18;UBERON:0005564!3.45e-40!18;UBERON:0003135!4.14e-39!15;UBERON:0003101!1.24e-36!16;UBERON:0000079!1.24e-36!16;UBERON:0004176!1.89e-34!17;UBERON:0009196!1.89e-34!17;UBERON:0009117!1.89e-34!17;UBERON:0003133!5.49e-30!24;UBERON:0005156!1.25e-27!26;UBERON:0000990!1.25e-27!26;UBERON:0002323!3.34e-19!37;UBERON:0004458!3.34e-19!37;UBERON:0003886!1.12e-18!38;UBERON:0002553!3.53e-18!39;UBERON:0000464!3.54e-12!57;UBERON:0000466!1.58e-08!79|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.50e-44,14;UBERON:0000991,2.31e-43,18;UBERON:0005564,2.31e-43,18;UBERON:0003135,3.86e-41,15;UBERON:0003101,1.43e-38,16;UBERON:0000079,1.43e-38,16;UBERON:0004176,2.64e-36,17;UBERON:0009196,2.64e-36,17;UBERON:0009117,2.64e-36,17;UBERON:0003133,1.59e-32,24;UBERON:0005156,5.08e-30,26;UBERON:0000990,5.08e-30,26;UBERON:0002323,4.54e-21,37;UBERON:0004458,4.54e-21,37;UBERON:0003886,1.64e-20,38;UBERON:0002553,5.55e-20,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58744546864041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69107881605257,5.38259565758324,7.44563207056939,3.50012139019286,0.129159823477731,0,0,1.3020438484395,3.35549902162275,1.44950472495604,1.15212002503146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Foxr1}} | ||
|EntrezGene=382074 | |||
|HGNC= | |||
|MCL_coexpression_id=2933 | |||
|UniProt=Q3UTB7,E9QND0 | |||
|association_with_transcript=-323bp_to_ENSMUST00000098837,ENSMUST00000114742,NM_001033469,uc009pdr.1_5end | |||
|description=CAGE_peak_1_at_Foxr1_5end | |||
|id=chr9:44249274..44249313,- | |||
|ontology_enrichment_celltype=CL:0002679!2.44e-08!1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!6.15e-42!14;UBERON:0000991!3.45e-40!18;UBERON:0005564!3.45e-40!18;UBERON:0003135!4.14e-39!15;UBERON:0003101!1.24e-36!16;UBERON:0000079!1.24e-36!16;UBERON:0004176!1.89e-34!17;UBERON:0009196!1.89e-34!17;UBERON:0009117!1.89e-34!17;UBERON:0003133!5.49e-30!24;UBERON:0005156!1.25e-27!26;UBERON:0000990!1.25e-27!26;UBERON:0002323!3.34e-19!37;UBERON:0004458!3.34e-19!37;UBERON:0003886!1.12e-18!38;UBERON:0002553!3.53e-18!39;UBERON:0000464!3.54e-12!57;UBERON:0000466!1.58e-08!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.50e-44,14;UBERON:0000991,2.31e-43,18;UBERON:0005564,2.31e-43,18;UBERON:0003135,3.86e-41,15;UBERON:0003101,1.43e-38,16;UBERON:0000079,1.43e-38,16;UBERON:0004176,2.64e-36,17;UBERON:0009196,2.64e-36,17;UBERON:0009117,2.64e-36,17;UBERON:0003133,1.59e-32,24;UBERON:0005156,5.08e-30,26;UBERON:0000990,5.08e-30,26;UBERON:0002323,4.54e-21,37;UBERON:0004458,4.54e-21,37;UBERON:0003886,1.64e-20,38;UBERON:0002553,5.55e-20,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58744546864041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69107881605257,5.38259565758324,7.44563207056939,3.50012139019286,0.129159823477731,0,0,1.3020438484395,3.35549902162275,1.44950472495604,1.15212002503146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Foxr1 | |||
}} |
Revision as of 17:56, 14 September 2013
Short description: | p1@Foxr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Foxr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2933 |
Association with transcript: | -323bp_to_ENSMUST00000098837, ENSMUST00000114742, NM_001033469, uc009pdr.1_5end |
EntrezGene: | Foxr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 4.50e-44 | 14 |
gonad | 2.31e-43 | 18 |
gonad primordium | 2.31e-43 | 18 |
male reproductive organ | 3.86e-41 | 15 |
male organism | 1.43e-38 | 16 |
male reproductive system | 1.43e-38 | 16 |
external genitalia | 2.64e-36 | 17 |
indifferent external genitalia | 2.64e-36 | 17 |
indifferent gonad | 2.64e-36 | 17 |
reproductive organ | 1.59e-32 | 24 |
reproductive structure | 5.08e-30 | 26 |
reproductive system | 5.08e-30 | 26 |
body cavity | 4.54e-21 | 37 |
body cavity or lining | 4.54e-21 | 37 |
body cavity precursor | 1.64e-20 | 38 |
anatomical cavity | 5.55e-20 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.