FFCP PHASE1:Mm9::chr9:46038017..46038058,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=722|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:46038017..46038058,-|id=chr9:46038017..46038058,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!9.13e-15!59;UBERON:0002107!1.43e-14!22;UBERON:0007499!1.43e-14!22;UBERON:0006925!1.43e-14!22;UBERON:0009497!1.43e-14!22;UBERON:0000015!1.43e-14!22;UBERON:0002423!1.43e-14!22;UBERON:0006235!1.43e-14!22;UBERON:0008835!1.43e-14!22;UBERON:0003894!1.43e-14!22;UBERON:0004161!1.43e-14!22;UBERON:0008836!1.43e-14!22;UBERON:0004119!6.54e-14!130;UBERON:0000925!6.54e-14!130;UBERON:0006595!6.54e-14!130;UBERON:0009854!1.59e-13!23;UBERON:0009856!1.59e-13!23;UBERON:0000160!1.60e-13!43;UBERON:0001007!2.88e-13!128;UBERON:0001555!2.88e-13!128;UBERON:0007026!2.88e-13!128;UBERON:0004921!3.30e-12!126;UBERON:0004185!3.30e-12!126;UBERON:0002365!1.04e-11!25;UBERON:0002330!1.04e-11!25;UBERON:0005172!4.44e-10!49;UBERON:0005173!4.44e-10!49;UBERON:0002417!4.44e-10!49;UBERON:0000916!4.44e-10!49;UBERON:0004923!6.05e-08!24;UBERON:0000344!6.66e-08!15|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.41e-17,22;UBERON:0007499,1.41e-17,22;UBERON:0006925,1.41e-17,22;UBERON:0009497,1.41e-17,22;UBERON:0000015,1.41e-17,22;UBERON:0002423,1.41e-17,22;UBERON:0006235,1.41e-17,22;UBERON:0008835,1.41e-17,22;UBERON:0003894,1.41e-17,22;UBERON:0004161,1.41e-17,22;UBERON:0008836,1.41e-17,22;UBERON:0009854,1.84e-16,23;UBERON:0009856,1.84e-16,23;UBERON:0002365,1.63e-14,25;UBERON:0002330,1.63e-14,25;UBERON:0000160,2.80e-14,31;UBERON:0005409,2.55e-12,47;UBERON:0004119,4.74e-12,118;UBERON:0000925,4.74e-12,118;UBERON:0006595,4.74e-12,118;UBERON:0001007,2.23e-11,116;UBERON:0001555,2.23e-11,116;UBERON:0007026,2.23e-11,116;UBERON:0004921,2.79e-10,114;UBERON:0005256,3.89e-08,45;UBERON:0000344,1.24e-07,15;UBERON:0005172,2.15e-07,49;UBERON:0005173,2.15e-07,49;UBERON:0002417,2.15e-07,49;UBERON:0000916,2.15e-07,49|phase1_expression=0,61.0706963368882,80.9898646113374,19.3577095236371,48.0859900748493,7.38668796412315,9.81173090501208,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,45.7578329189143,85.3402525569873,37.3250776674763,25.8457197695445,50.8512109138698,34.3942389216037,33.0159469985509,35.0334206835381,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,57.6483997577529,148.23375074829,256.359016027963,89.6691456077783,36.2901778548842,23.7351070022661,0,0,0,0,0,0,0,0,0,0,75.5897283740177,0,0.148442139064825,1.90833859442749,5.78484408793068,3.92046345335299,11.0027527603414,3.52766121407114,0.879666139307728,104.810666319375,0,0,0,0,0,0,0,0,84.5562852740437,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0,0,0,0,0,0,4.52114453507145,0,0,0,0,0,0.567318240503458,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,91.8564216694958,36.7586287662327,0.213288250535234,0.928946687441754,0.644337306610467,2.42020229548011,13.3426826306922,31.3872283085723,127.173788493929,384.901457190013,189.758082644203,133.897705683695,131.015866544049,98.8701349519644,113.25633813434,121.874459231673,0,0.913988100877831,1.1270773567308,0.203651327845314,0,0.350679099451593,0,0,0,0,63.737314823737,1.50160595144485,3.53806191203765,5.39669069723649,8.92584534109413,26.7706647325183,64.9295922042621,58.6900120399654,240.122270853827,261.93158818143,205.588535334117,402.284364429652,460.255567843977,142.707066040118,93.6454498584382,189.11786037444,0,0,0.162964976442026,0,0,0,0.476087281772027,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,8.72521457969551,0,0,0,0.728341908464944,0.604647113929502,0.754420319023592,0.295301892880773,0,27.3933990758314,0.363533729477506,1.42598951353889,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,6.14313005505079,0,0,0,0,0,0.164140899745061,156.2337284336,0,0,0.206386867963223,0.740778109478847,0.188368457004691,0.136694227721025,0,0,0,0,1.90934123603023,0,0.406638934253697,3.13215488383224,1.88179466413022,9.60795280483181,8.36158947585888,17.7704929809472,19.1081837648342,0,0,0,0,0,0,0,0,0.117357238645754,2.8644964665669,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0.853668028770671,2.67417388775123,1.04806581313991,3.67687016900028,6.22290837844523,5.15087643097235,6.09746498224449,5.55933865880354,7.09742039692671,5.28153755881013,5.99305647807247,5.57018825922363,4.82457939227151,4.28664322154766,6.48952225291191,6.55891349576597,6.59337441285291,6.32955356577908,10.9718160763333,11.1809757880383,6.91464950847231,9.30217066446903,8.65806299821042,9.30760686808441,8.41468675214754,6.31367307450823,7.06181391998481,6.73370725989286,7.11810108745045,7.38783617816726,6.54769669071503,4.49316839439301,4.43685205256625,0,7.01794825336225,11.1732948105115,0,0.882365676478062,0|short_description=p@chr9:46038017..46038058,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=722 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:46038017..46038058,- | |||
|id=chr9:46038017..46038058,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!9.13e-15!59;UBERON:0002107!1.43e-14!22;UBERON:0007499!1.43e-14!22;UBERON:0006925!1.43e-14!22;UBERON:0009497!1.43e-14!22;UBERON:0000015!1.43e-14!22;UBERON:0002423!1.43e-14!22;UBERON:0006235!1.43e-14!22;UBERON:0008835!1.43e-14!22;UBERON:0003894!1.43e-14!22;UBERON:0004161!1.43e-14!22;UBERON:0008836!1.43e-14!22;UBERON:0004119!6.54e-14!130;UBERON:0000925!6.54e-14!130;UBERON:0006595!6.54e-14!130;UBERON:0009854!1.59e-13!23;UBERON:0009856!1.59e-13!23;UBERON:0000160!1.60e-13!43;UBERON:0001007!2.88e-13!128;UBERON:0001555!2.88e-13!128;UBERON:0007026!2.88e-13!128;UBERON:0004921!3.30e-12!126;UBERON:0004185!3.30e-12!126;UBERON:0002365!1.04e-11!25;UBERON:0002330!1.04e-11!25;UBERON:0005172!4.44e-10!49;UBERON:0005173!4.44e-10!49;UBERON:0002417!4.44e-10!49;UBERON:0000916!4.44e-10!49;UBERON:0004923!6.05e-08!24;UBERON:0000344!6.66e-08!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.41e-17,22;UBERON:0007499,1.41e-17,22;UBERON:0006925,1.41e-17,22;UBERON:0009497,1.41e-17,22;UBERON:0000015,1.41e-17,22;UBERON:0002423,1.41e-17,22;UBERON:0006235,1.41e-17,22;UBERON:0008835,1.41e-17,22;UBERON:0003894,1.41e-17,22;UBERON:0004161,1.41e-17,22;UBERON:0008836,1.41e-17,22;UBERON:0009854,1.84e-16,23;UBERON:0009856,1.84e-16,23;UBERON:0002365,1.63e-14,25;UBERON:0002330,1.63e-14,25;UBERON:0000160,2.80e-14,31;UBERON:0005409,2.55e-12,47;UBERON:0004119,4.74e-12,118;UBERON:0000925,4.74e-12,118;UBERON:0006595,4.74e-12,118;UBERON:0001007,2.23e-11,116;UBERON:0001555,2.23e-11,116;UBERON:0007026,2.23e-11,116;UBERON:0004921,2.79e-10,114;UBERON:0005256,3.89e-08,45;UBERON:0000344,1.24e-07,15;UBERON:0005172,2.15e-07,49;UBERON:0005173,2.15e-07,49;UBERON:0002417,2.15e-07,49;UBERON:0000916,2.15e-07,49 | |||
|phase1_expression=0,61.0706963368882,80.9898646113374,19.3577095236371,48.0859900748493,7.38668796412315,9.81173090501208,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,45.7578329189143,85.3402525569873,37.3250776674763,25.8457197695445,50.8512109138698,34.3942389216037,33.0159469985509,35.0334206835381,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,57.6483997577529,148.23375074829,256.359016027963,89.6691456077783,36.2901778548842,23.7351070022661,0,0,0,0,0,0,0,0,0,0,75.5897283740177,0,0.148442139064825,1.90833859442749,5.78484408793068,3.92046345335299,11.0027527603414,3.52766121407114,0.879666139307728,104.810666319375,0,0,0,0,0,0,0,0,84.5562852740437,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0,0,0,0,0,0,4.52114453507145,0,0,0,0,0,0.567318240503458,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,91.8564216694958,36.7586287662327,0.213288250535234,0.928946687441754,0.644337306610467,2.42020229548011,13.3426826306922,31.3872283085723,127.173788493929,384.901457190013,189.758082644203,133.897705683695,131.015866544049,98.8701349519644,113.25633813434,121.874459231673,0,0.913988100877831,1.1270773567308,0.203651327845314,0,0.350679099451593,0,0,0,0,63.737314823737,1.50160595144485,3.53806191203765,5.39669069723649,8.92584534109413,26.7706647325183,64.9295922042621,58.6900120399654,240.122270853827,261.93158818143,205.588535334117,402.284364429652,460.255567843977,142.707066040118,93.6454498584382,189.11786037444,0,0,0.162964976442026,0,0,0,0.476087281772027,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,8.72521457969551,0,0,0,0.728341908464944,0.604647113929502,0.754420319023592,0.295301892880773,0,27.3933990758314,0.363533729477506,1.42598951353889,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,6.14313005505079,0,0,0,0,0,0.164140899745061,156.2337284336,0,0,0.206386867963223,0.740778109478847,0.188368457004691,0.136694227721025,0,0,0,0,1.90934123603023,0,0.406638934253697,3.13215488383224,1.88179466413022,9.60795280483181,8.36158947585888,17.7704929809472,19.1081837648342,0,0,0,0,0,0,0,0,0.117357238645754,2.8644964665669,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0.853668028770671,2.67417388775123,1.04806581313991,3.67687016900028,6.22290837844523,5.15087643097235,6.09746498224449,5.55933865880354,7.09742039692671,5.28153755881013,5.99305647807247,5.57018825922363,4.82457939227151,4.28664322154766,6.48952225291191,6.55891349576597,6.59337441285291,6.32955356577908,10.9718160763333,11.1809757880383,6.91464950847231,9.30217066446903,8.65806299821042,9.30760686808441,8.41468675214754,6.31367307450823,7.06181391998481,6.73370725989286,7.11810108745045,7.38783617816726,6.54769669071503,4.49316839439301,4.43685205256625,0,7.01794825336225,11.1732948105115,0,0.882365676478062,0 | |||
|short_description=p@chr9:46038017..46038058,- | |||
}} |
Revision as of 18:03, 14 September 2013
Short description: | p@chr9:46038017..46038058, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46038017..46038058, - |
Coexpression cluster: | MCL_coexpression_mm9:722 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.41e-17 | 22 |
epithelial sac | 1.41e-17 | 22 |
digestive gland | 1.41e-17 | 22 |
epithelium of foregut-midgut junction | 1.41e-17 | 22 |
anatomical boundary | 1.41e-17 | 22 |
hepatobiliary system | 1.41e-17 | 22 |
foregut-midgut junction | 1.41e-17 | 22 |
hepatic diverticulum | 1.41e-17 | 22 |
liver primordium | 1.41e-17 | 22 |
septum transversum | 1.41e-17 | 22 |
liver bud | 1.41e-17 | 22 |
digestive tract diverticulum | 1.84e-16 | 23 |
sac | 1.84e-16 | 23 |
exocrine gland | 1.63e-14 | 25 |
exocrine system | 1.63e-14 | 25 |
intestine | 2.80e-14 | 31 |
gastrointestinal system | 2.55e-12 | 47 |
endoderm-derived structure | 4.74e-12 | 118 |
endoderm | 4.74e-12 | 118 |
presumptive endoderm | 4.74e-12 | 118 |
digestive system | 2.23e-11 | 116 |
digestive tract | 2.23e-11 | 116 |
primitive gut | 2.23e-11 | 116 |
subdivision of digestive tract | 2.79e-10 | 114 |
trunk mesenchyme | 3.89e-08 | 45 |
mucosa | 1.24e-07 | 15 |
abdomen element | 2.15e-07 | 49 |
abdominal segment element | 2.15e-07 | 49 |
abdominal segment of trunk | 2.15e-07 | 49 |
abdomen | 2.15e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.