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FFCP PHASE1:Mm9::chr9:77961197..77961209,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=56542|HGNC=|UniProt=Q9JKV2|association_with_transcript=75bp_to_ENSMUST00000044551_5end|description=CAGE_peak_5_at_Ick_5end|id=chr9:77961197..77961209,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,1.00e-07,9;CL:0000075,2.12e-07,7;CL:0000239,8.23e-07,6;CL:0000677,8.23e-07,6;CL:0000584,8.23e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.47e-08!15;UBERON:0005409!1.71e-07!59;UBERON:0000160!5.99e-07!43;UBERON:0001242!7.65e-07!13;UBERON:0000060!7.65e-07!13;UBERON:0001262!7.65e-07!13;UBERON:0004786!7.65e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.37e-18,47;UBERON:0000160,2.55e-16,31;UBERON:0000344,6.44e-10,15;UBERON:0001007,7.79e-10,116;UBERON:0001555,7.79e-10,116;UBERON:0007026,7.79e-10,116;UBERON:0004119,2.32e-09,118;UBERON:0000925,2.32e-09,118;UBERON:0006595,2.32e-09,118;UBERON:0004921,8.76e-09,114;UBERON:0011216,1.05e-08,194;UBERON:0001242,3.28e-08,13;UBERON:0001262,3.28e-08,13;UBERON:0004786,3.28e-08,13;UBERON:0002410,1.00e-07,9;UBERON:0000010,7.49e-07,11|phase1_expression=0.480446541314382,10.1202868215415,16.8349718574128,6.65421264875026,7.01254021924886,6.71517087647559,8.41005506143892,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,7.83962871687693,8.48814339948529,17.8011908875656,9.47676391549965,8.40337807474967,10.6413114895569,8.56902441183765,12.1951780860418,0,0,0,0.288851619751275,1.16364251750945,0.816677425049476,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0.979904951377538,0,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,0.809265843438391,0.528990979272033,0,0,0,0.449949858640699,0.988866362566974,0,1.19840044207362,0.384218305321555,0.311068836925433,0.270011876663381,0,1.14260393761521,3.97563373712904,0.244981598429908,0.191690942036473,0,1.10115880999389,1.78762273319263,1.0752457327937,0.527545150920775,0.731901148819277,0.52091337055676,0.837548997004143,0.56276261003168,0.763991238884051,1.17851434189467,1.85083185038834,0.186399445825301,0.757261933331841,1.28471652181535,0.289864488701678,0,2.03991400112325,0,0,0,1.82577746171277,1.02258193546835,0.259786004602869,0.35333957451034,3.52108549441701,1.28326477414318,0,0,1.73192832808971,2.53359865475099,1.51657333504435,2.2836775943812,0.258937883647172,0.742210695324124,0.173485326766136,0,0.461230994512117,0.452167921657868,0.352766121407114,0.251333182659351,2.71914464507811,1.87979163995885,0,0.323533699894818,0.220841518460394,0,5.59175283654366,0.292780797011547,1.67557365450764,7.40825460104915,0.359445373517761,1.19980546198682,0,2.09706895166752,4.57500602818627,0.125654352112864,1.39059456153821,0.511430914660661,3.1168206683934,2.10913641988085,0.305518091550949,0.497627882440372,1.0108910337347,0.210441855886474,0.130120442962704,0.919608417733892,0.720248519221397,0.60281927134286,0.476255494059295,0,0.562210347358373,0.517406741478031,0.862271971731369,1.13463648100692,0.703804496655795,0.43839146485515,0.556094498451196,0.348252166522167,0.823128545631774,0.199034266818493,0.702213187313235,0.772043721344145,0,0.621377317606506,0.703578179943289,0.180062061461015,0,1.37734962223183,1.23413690309903,0.697601834251224,0.536546802799238,1.16765342367169,0.658239399653922,0.985004784474571,1.37816976227955,0.730999937126662,0.658650345873152,0.805238512562231,0.630869845692382,0.411618449517138,7.93005079161115,7.93351699990633,0.426576501070468,0.928946687441754,1.54640953586512,4.23535401709019,4.89231696458715,3.23383564391351,3.32170343081158,3.95277491337626,2.26201687920243,3.78017296878187,1.75467678407208,4.49409704327111,2.37751854862164,5.97423819763102,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.98190147846446,0.379419222745544,0.147610147979602,1.09899109488962,0.616985819609003,0,0.333690211432188,0.393117990226406,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0,0.312037673114561,0,0,0,3.32555742299888,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.502518772325447,2.38043640886014,3.51240566144038,1.7339865851681,1.32878813789265,1.2756381492599,3.11340297959902,1.72684981865896,4.91806799177139,0,0,1.47529281905711,0.827810238914197,1.60550589987792,2.69586879162067,0.491804836130026,1.00988370881749,5.67914794949262,7.41833614163613,12.2791336707695,3.34556317133573,3.56477878531831,4.24614796183249,2.83367491172426,4.9683495844923,3.16230222357219,0.642642632843614,0.425820255624806,0,0.325773918707152,0.494910368917606,0,0.485561272309963,0,0.188605079755898,0,0.614870295887855,1.55056975900933,0.363533729477506,0.356497378384721,0,0,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0.177340233642274,0.535106452806212,0.329098041204242,0.608929898229199,0.469343416127421,0.42366414172764,2.20528398054962,3.46261131177108,4.68246837418126,2.89502039655148,2.74556391207214,2.9545361954111,2.33184669303881,2.22510362412612,0,0,0,0.188368457004691,0,0,0.849892149969277,1.53946597556024,1.38199973804424,20.0480829783174,1.10717597753397,3.04979200690273,3.24016022465404,3.97267762427491,3.49380101993884,3.77620169877498,4.1326727862668,5.75863072364865,5.05498395837992,4.34937519160848,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0.419437377702843,0,0.288030006257865,0,0.608175645870493,0.410843828659309,1.03936658382236,0.358053391334963,0,0,0.295379054349154,0.201932899896295,0.228620419965,0.201652370273681,0.38983152295901,0,0.350630706544707,3.17422537061296,0,0,0,5.02292944483695,0.563047426353546,0.73260649706906,4.71610433973945,2.00628841614145,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0,0.675022500231806,0.45032120322422,0.906284817968409,1.03552062350364,1.03787347584177,0.399024873401031,0.170733605754134,1.45864030240976,0.838452650511929,0.367687016900028,1.11123363900808,1.03017528619447,0,1.51618327058278,0,0.565879024158229,0.749132059759059,0.89635213366817,0.631790158511746,0.476293691283074,1.15884325944855,0.964546102318525,1.64834360321323,0.147198920134397,0.685738504770831,0.70990322463735,0.476872379894642,0.145346416632329,0.376437521661322,0.761531471025089,1.09756783723664,0.789209134313529,0.679020569229309,0.561142271657738,0.949080144993393,0.492522411877817,1.22769312950907,0.929621047115796,0.578719832943424,0.749431733813838,0.701794825336225,1.50409737833809,2.29545998482612,1.54413993383661,0.695603506861264|short_description=p5@Ick}}
|EntrezGene=56542
|HGNC=
|UniProt=Q9JKV2
|association_with_transcript=75bp_to_ENSMUST00000044551_5end
|description=CAGE_peak_5_at_Ick_5end
|id=chr9:77961197..77961209,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000107,1.00e-07,9;CL:0000075,2.12e-07,7;CL:0000239,8.23e-07,6;CL:0000677,8.23e-07,6;CL:0000584,8.23e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!4.47e-08!15;UBERON:0005409!1.71e-07!59;UBERON:0000160!5.99e-07!43;UBERON:0001242!7.65e-07!13;UBERON:0000060!7.65e-07!13;UBERON:0001262!7.65e-07!13;UBERON:0004786!7.65e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.37e-18,47;UBERON:0000160,2.55e-16,31;UBERON:0000344,6.44e-10,15;UBERON:0001007,7.79e-10,116;UBERON:0001555,7.79e-10,116;UBERON:0007026,7.79e-10,116;UBERON:0004119,2.32e-09,118;UBERON:0000925,2.32e-09,118;UBERON:0006595,2.32e-09,118;UBERON:0004921,8.76e-09,114;UBERON:0011216,1.05e-08,194;UBERON:0001242,3.28e-08,13;UBERON:0001262,3.28e-08,13;UBERON:0004786,3.28e-08,13;UBERON:0002410,1.00e-07,9;UBERON:0000010,7.49e-07,11
|phase1_expression=0.480446541314382,10.1202868215415,16.8349718574128,6.65421264875026,7.01254021924886,6.71517087647559,8.41005506143892,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,7.83962871687693,8.48814339948529,17.8011908875656,9.47676391549965,8.40337807474967,10.6413114895569,8.56902441183765,12.1951780860418,0,0,0,0.288851619751275,1.16364251750945,0.816677425049476,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0.979904951377538,0,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,0.809265843438391,0.528990979272033,0,0,0,0.449949858640699,0.988866362566974,0,1.19840044207362,0.384218305321555,0.311068836925433,0.270011876663381,0,1.14260393761521,3.97563373712904,0.244981598429908,0.191690942036473,0,1.10115880999389,1.78762273319263,1.0752457327937,0.527545150920775,0.731901148819277,0.52091337055676,0.837548997004143,0.56276261003168,0.763991238884051,1.17851434189467,1.85083185038834,0.186399445825301,0.757261933331841,1.28471652181535,0.289864488701678,0,2.03991400112325,0,0,0,1.82577746171277,1.02258193546835,0.259786004602869,0.35333957451034,3.52108549441701,1.28326477414318,0,0,1.73192832808971,2.53359865475099,1.51657333504435,2.2836775943812,0.258937883647172,0.742210695324124,0.173485326766136,0,0.461230994512117,0.452167921657868,0.352766121407114,0.251333182659351,2.71914464507811,1.87979163995885,0,0.323533699894818,0.220841518460394,0,5.59175283654366,0.292780797011547,1.67557365450764,7.40825460104915,0.359445373517761,1.19980546198682,0,2.09706895166752,4.57500602818627,0.125654352112864,1.39059456153821,0.511430914660661,3.1168206683934,2.10913641988085,0.305518091550949,0.497627882440372,1.0108910337347,0.210441855886474,0.130120442962704,0.919608417733892,0.720248519221397,0.60281927134286,0.476255494059295,0,0.562210347358373,0.517406741478031,0.862271971731369,1.13463648100692,0.703804496655795,0.43839146485515,0.556094498451196,0.348252166522167,0.823128545631774,0.199034266818493,0.702213187313235,0.772043721344145,0,0.621377317606506,0.703578179943289,0.180062061461015,0,1.37734962223183,1.23413690309903,0.697601834251224,0.536546802799238,1.16765342367169,0.658239399653922,0.985004784474571,1.37816976227955,0.730999937126662,0.658650345873152,0.805238512562231,0.630869845692382,0.411618449517138,7.93005079161115,7.93351699990633,0.426576501070468,0.928946687441754,1.54640953586512,4.23535401709019,4.89231696458715,3.23383564391351,3.32170343081158,3.95277491337626,2.26201687920243,3.78017296878187,1.75467678407208,4.49409704327111,2.37751854862164,5.97423819763102,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.98190147846446,0.379419222745544,0.147610147979602,1.09899109488962,0.616985819609003,0,0.333690211432188,0.393117990226406,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0,0.312037673114561,0,0,0,3.32555742299888,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.502518772325447,2.38043640886014,3.51240566144038,1.7339865851681,1.32878813789265,1.2756381492599,3.11340297959902,1.72684981865896,4.91806799177139,0,0,1.47529281905711,0.827810238914197,1.60550589987792,2.69586879162067,0.491804836130026,1.00988370881749,5.67914794949262,7.41833614163613,12.2791336707695,3.34556317133573,3.56477878531831,4.24614796183249,2.83367491172426,4.9683495844923,3.16230222357219,0.642642632843614,0.425820255624806,0,0.325773918707152,0.494910368917606,0,0.485561272309963,0,0.188605079755898,0,0.614870295887855,1.55056975900933,0.363533729477506,0.356497378384721,0,0,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0.177340233642274,0.535106452806212,0.329098041204242,0.608929898229199,0.469343416127421,0.42366414172764,2.20528398054962,3.46261131177108,4.68246837418126,2.89502039655148,2.74556391207214,2.9545361954111,2.33184669303881,2.22510362412612,0,0,0,0.188368457004691,0,0,0.849892149969277,1.53946597556024,1.38199973804424,20.0480829783174,1.10717597753397,3.04979200690273,3.24016022465404,3.97267762427491,3.49380101993884,3.77620169877498,4.1326727862668,5.75863072364865,5.05498395837992,4.34937519160848,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0.419437377702843,0,0.288030006257865,0,0.608175645870493,0.410843828659309,1.03936658382236,0.358053391334963,0,0,0.295379054349154,0.201932899896295,0.228620419965,0.201652370273681,0.38983152295901,0,0.350630706544707,3.17422537061296,0,0,0,5.02292944483695,0.563047426353546,0.73260649706906,4.71610433973945,2.00628841614145,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0,0.675022500231806,0.45032120322422,0.906284817968409,1.03552062350364,1.03787347584177,0.399024873401031,0.170733605754134,1.45864030240976,0.838452650511929,0.367687016900028,1.11123363900808,1.03017528619447,0,1.51618327058278,0,0.565879024158229,0.749132059759059,0.89635213366817,0.631790158511746,0.476293691283074,1.15884325944855,0.964546102318525,1.64834360321323,0.147198920134397,0.685738504770831,0.70990322463735,0.476872379894642,0.145346416632329,0.376437521661322,0.761531471025089,1.09756783723664,0.789209134313529,0.679020569229309,0.561142271657738,0.949080144993393,0.492522411877817,1.22769312950907,0.929621047115796,0.578719832943424,0.749431733813838,0.701794825336225,1.50409737833809,2.29545998482612,1.54413993383661,0.695603506861264
|short_description=p5@Ick
}}

Revision as of 18:50, 14 September 2013

Short description:p5@Ick
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Ick_5end
Coexpression cluster:NA
Association with transcript: 75bp_to_ENSMUST00000044551_5end
EntrezGene:Ick
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Ick

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.83
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.65
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.72
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.41
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.49
GP2+ M cell, pool1.CNhs13228.11845-124H917.80
GP2+ M cell, pool2.CNhs13231.11846-124I19.48
GP2+ M cell, pool3.CNhs13240.11847-124I28.40
Ileum epithelium, pool1.CNhs13199.10252-104B910.64
Ileum epithelium, pool2.CNhs13232.10253-104C18.57
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I37.93
intestine, adult.CNhs10496.178-9A37.93
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E93.95
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H24.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.28
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G44.68
skin, neonate N03.CNhs11215.662-22H32.90
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H620.05
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B83.78
stomach, neonate N07.CNhs11210.718-18A94.13
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I15.05
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron1.00e-079
columnar/cuboidal epithelial cell2.12e-077
brush border epithelial cell8.23e-076
gut absorptive cell8.23e-076
enterocyte8.23e-076

Uber anatomy
Ontology termp-valuen
gastrointestinal system3.37e-1847
intestine2.55e-1631
mucosa6.44e-1015
digestive system7.79e-10116
digestive tract7.79e-10116
primitive gut7.79e-10116
endoderm-derived structure2.32e-09118
endoderm2.32e-09118
presumptive endoderm2.32e-09118
subdivision of digestive tract8.76e-09114
organ system subdivision1.05e-08194
intestinal mucosa3.28e-0813
wall of intestine3.28e-0813
gastrointestinal system mucosa3.28e-0813
autonomic nervous system1.00e-079
peripheral nervous system7.49e-0711







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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