FFCP PHASE1:Mm9::chr9:78328543..78328589,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13627|HGNC=|MCL_coexpression_id=8|UniProt=|association_with_transcript=-48bp_to_ENSMUST00000126614,ENSMUST00000144523_5end|description=CAGE_peak_4_at_Eef1a1_5end|id=chr9:78328543..78328589,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,7.78e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.20e-11!22;UBERON:0007499!3.20e-11!22;UBERON:0006925!3.20e-11!22;UBERON:0009497!3.20e-11!22;UBERON:0000015!3.20e-11!22;UBERON:0002423!3.20e-11!22;UBERON:0006235!3.20e-11!22;UBERON:0008835!3.20e-11!22;UBERON:0003894!3.20e-11!22;UBERON:0004161!3.20e-11!22;UBERON:0008836!3.20e-11!22;UBERON:0009854!3.89e-10!23;UBERON:0009856!3.89e-10!23;UBERON:0002365!4.44e-10!25;UBERON:0002330!4.44e-10!25;UBERON:0005172!9.79e-08!49;UBERON:0005173!9.79e-08!49;UBERON:0002417!9.79e-08!49;UBERON:0000916!9.79e-08!49;UBERON:0003914!1.13e-07!47;UBERON:0005256!6.59e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.72e-21,22;UBERON:0007499,7.72e-21,22;UBERON:0006925,7.72e-21,22;UBERON:0009497,7.72e-21,22;UBERON:0000015,7.72e-21,22;UBERON:0002423,7.72e-21,22;UBERON:0006235,7.72e-21,22;UBERON:0008835,7.72e-21,22;UBERON:0003894,7.72e-21,22;UBERON:0004161,7.72e-21,22;UBERON:0008836,7.72e-21,22;UBERON:0009854,1.02e-19,23;UBERON:0009856,1.02e-19,23;UBERON:0002365,9.47e-18,25;UBERON:0002330,9.47e-18,25;UBERON:0005256,3.19e-11,45;UBERON:0003914,1.62e-10,47;UBERON:0004119,1.88e-10,118;UBERON:0000925,1.88e-10,118;UBERON:0006595,1.88e-10,118;UBERON:0000490,9.18e-10,66;UBERON:0003929,1.50e-09,55;UBERON:0001007,4.44e-09,116;UBERON:0001555,4.44e-09,116;UBERON:0007026,4.44e-09,116;UBERON:0004921,8.76e-08,114;UBERON:0003104,9.01e-08,61;UBERON:0009142,9.01e-08,61;UBERON:0005172,9.50e-08,49;UBERON:0005173,9.50e-08,49;UBERON:0002417,9.50e-08,49;UBERON:0000916,9.50e-08,49|phase1_expression=0,1.74487703819681,1.81999695755814,0.90739263392049,0,0.33575854382378,0.700837921786577,0,4.08287294239834,3.7450324211519,0.513653904676515,0.319088635981346,0,0,0.666219523631325,1.01237633694913,0,0.315462165358238,0.137114433605739,0,0.425216450755349,0,0.522399578277871,2.07990149631429,1.83527424853736,2.8711598205751,0.86152399231815,1.72376986148711,1.14014051673824,0,1.33038306393183,0.635030673459631,1.23012957516914,0,0,0.664938581433969,0,0.418531630736908,0,0,0.588231488031014,0,0.971020706062307,0.755380907853464,1.21652317463417,1.46837401729345,0,0.436050312760893,0.659058548203415,0,0.139986421625363,0,0.503347818173209,0,0,2.05807548828758,0.85960031981627,0,0,0.528990979272033,0,1.35537812827653,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0.207379224616955,0.135005938331691,0,0.571301968807607,0,0,0.191690942036473,0,0,0.383062014255563,0.614426133024974,0,0.182975287204819,0,0,0,0.61119299110724,0.294628585473668,0.427115042397309,0,7.95125029998433,1.058001841495,0.289864488701678,6.88339101585109,9.51959867190851,7.55584468292944,7.14754059192436,4.03224198387602,1.82577746171277,0.511290967734173,0.519572009205738,0.70667914902068,0,0,0,0,1.73192832808971,1.01343946190039,0.505524445014783,2.62622923353838,0,0,0.346970653532272,0,0.922461989024234,0.150722640552623,0.23517741427141,0.879666139307728,0.247194967734374,0.578397427679647,0.884610551949874,0,0.220841518460394,0,0,0,0.209446706813455,1.27728527604296,0.239630249011841,0,0.381210681219194,0.149790639404823,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.486723789203273,0.101839363850316,0.248813941220186,0.252722758433675,0.631325567659422,0.260240885925407,0.229902104433473,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.175951124163949,0,0,0.696504333044333,0.205782136407943,0.199034266818493,0.702213187313235,0.51469581422943,0.284163499395593,0.621377317606506,0.234526059981096,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0.467061369468678,0.658239399653922,0.32833492815819,0.162137619091711,0,0,0.268412837520744,0.210289948564127,0.514523061896422,2.97376904685418,4.7601101999438,0,0,0,0,0.667134131534611,0.951128130562796,1.42358718463353,0.823494773620054,1.50801125280162,1.59165177632921,1.36474860983384,0,0.648414149624083,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0.581857461502877,0.631222379012867,0.252946148497029,0.442830443938806,1.41298855057237,0.370191491765402,2.96452627087149,0.166845105716094,1.17935397067922,1.12431056192427,1.82574109249653,0.482354319504834,0.763877555344259,0.575392274901621,1.94562272130042,4.66754402419738,8.62609239164127,4.09355042435354,2.49630138491648,2.77836765741823,7.89348619496414,1.92977408545347,0,0.37898282354097,0.162964976442026,0,0.469380496577004,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.234423373184406,0.327869890753351,0,0.631016438832513,0,0.215423397732799,0.238968797952552,0,0.566153061577665,0,0.8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| ||
|EntrezGene=13627 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt= | |||
|association_with_transcript=-48bp_to_ENSMUST00000126614,ENSMUST00000144523_5end | |||
|description=CAGE_peak_4_at_Eef1a1_5end | |||
|id=chr9:78328543..78328589,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.78e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.20e-11!22;UBERON:0007499!3.20e-11!22;UBERON:0006925!3.20e-11!22;UBERON:0009497!3.20e-11!22;UBERON:0000015!3.20e-11!22;UBERON:0002423!3.20e-11!22;UBERON:0006235!3.20e-11!22;UBERON:0008835!3.20e-11!22;UBERON:0003894!3.20e-11!22;UBERON:0004161!3.20e-11!22;UBERON:0008836!3.20e-11!22;UBERON:0009854!3.89e-10!23;UBERON:0009856!3.89e-10!23;UBERON:0002365!4.44e-10!25;UBERON:0002330!4.44e-10!25;UBERON:0005172!9.79e-08!49;UBERON:0005173!9.79e-08!49;UBERON:0002417!9.79e-08!49;UBERON:0000916!9.79e-08!49;UBERON:0003914!1.13e-07!47;UBERON:0005256!6.59e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.72e-21,22;UBERON:0007499,7.72e-21,22;UBERON:0006925,7.72e-21,22;UBERON:0009497,7.72e-21,22;UBERON:0000015,7.72e-21,22;UBERON:0002423,7.72e-21,22;UBERON:0006235,7.72e-21,22;UBERON:0008835,7.72e-21,22;UBERON:0003894,7.72e-21,22;UBERON:0004161,7.72e-21,22;UBERON:0008836,7.72e-21,22;UBERON:0009854,1.02e-19,23;UBERON:0009856,1.02e-19,23;UBERON:0002365,9.47e-18,25;UBERON:0002330,9.47e-18,25;UBERON:0005256,3.19e-11,45;UBERON:0003914,1.62e-10,47;UBERON:0004119,1.88e-10,118;UBERON:0000925,1.88e-10,118;UBERON:0006595,1.88e-10,118;UBERON:0000490,9.18e-10,66;UBERON:0003929,1.50e-09,55;UBERON:0001007,4.44e-09,116;UBERON:0001555,4.44e-09,116;UBERON:0007026,4.44e-09,116;UBERON:0004921,8.76e-08,114;UBERON:0003104,9.01e-08,61;UBERON:0009142,9.01e-08,61;UBERON:0005172,9.50e-08,49;UBERON:0005173,9.50e-08,49;UBERON:0002417,9.50e-08,49;UBERON:0000916,9.50e-08,49 | |||
|phase1_expression=0,1.74487703819681,1.81999695755814,0.90739263392049,0,0.33575854382378,0.700837921786577,0,4.08287294239834,3.7450324211519,0.513653904676515,0.319088635981346,0,0,0.666219523631325,1.01237633694913,0,0.315462165358238,0.137114433605739,0,0.425216450755349,0,0.522399578277871,2.07990149631429,1.83527424853736,2.8711598205751,0.86152399231815,1.72376986148711,1.14014051673824,0,1.33038306393183,0.635030673459631,1.23012957516914,0,0,0.664938581433969,0,0.418531630736908,0,0,0.588231488031014,0,0.971020706062307,0.755380907853464,1.21652317463417,1.46837401729345,0,0.436050312760893,0.659058548203415,0,0.139986421625363,0,0.503347818173209,0,0,2.05807548828758,0.85960031981627,0,0,0.528990979272033,0,1.35537812827653,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0.207379224616955,0.135005938331691,0,0.571301968807607,0,0,0.191690942036473,0,0,0.383062014255563,0.614426133024974,0,0.182975287204819,0,0,0,0.61119299110724,0.294628585473668,0.427115042397309,0,7.95125029998433,1.058001841495,0.289864488701678,6.88339101585109,9.51959867190851,7.55584468292944,7.14754059192436,4.03224198387602,1.82577746171277,0.511290967734173,0.519572009205738,0.70667914902068,0,0,0,0,1.73192832808971,1.01343946190039,0.505524445014783,2.62622923353838,0,0,0.346970653532272,0,0.922461989024234,0.150722640552623,0.23517741427141,0.879666139307728,0.247194967734374,0.578397427679647,0.884610551949874,0,0.220841518460394,0,0,0,0.209446706813455,1.27728527604296,0.239630249011841,0,0.381210681219194,0.149790639404823,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.486723789203273,0.101839363850316,0.248813941220186,0.252722758433675,0.631325567659422,0.260240885925407,0.229902104433473,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.175951124163949,0,0,0.696504333044333,0.205782136407943,0.199034266818493,0.702213187313235,0.51469581422943,0.284163499395593,0.621377317606506,0.234526059981096,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0.467061369468678,0.658239399653922,0.32833492815819,0.162137619091711,0,0,0.268412837520744,0.210289948564127,0.514523061896422,2.97376904685418,4.7601101999438,0,0,0,0,0.667134131534611,0.951128130562796,1.42358718463353,0.823494773620054,1.50801125280162,1.59165177632921,1.36474860983384,0,0.648414149624083,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0.581857461502877,0.631222379012867,0.252946148497029,0.442830443938806,1.41298855057237,0.370191491765402,2.96452627087149,0.166845105716094,1.17935397067922,1.12431056192427,1.82574109249653,0.482354319504834,0.763877555344259,0.575392274901621,1.94562272130042,4.66754402419738,8.62609239164127,4.09355042435354,2.49630138491648,2.77836765741823,7.89348619496414,1.92977408545347,0,0.37898282354097,0.162964976442026,0,0.469380496577004,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.234423373184406,0.327869890753351,0,0.631016438832513,0,0.215423397732799,0.238968797952552,0,0.566153061577665,0,0.876767573733936,0.395287777946524,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0,0.307435147943927,1.29214146584111,0,0,0.316036757935816,0,0,0,0.36012218806262,0,0.214337035031592,0.354680467284547,0,0.329098041204242,0,2.11204537257339,1.69465656691056,0.220528398054962,0,0.161464426695906,0.301564624640779,0.477489376012546,0,0.582961673259701,0.18542530201051,0.341741761595705,0.206386867963223,0.555583582109135,0.565105371014073,0.27338845544205,0,0,0.279902904647316,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0.809186078308924,0.495920734352016,0,0,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0,0,0.616265742988964,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0.192423683280659,0,0,1.55390167361845,6.19025610605382,2.01461539636894,0.19318959403219,0.187682475451182,0,0.214368379079066,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.419226325255965,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,1.01391719956096,0.188626341386076,0.749132059759059,0.640251524048693,0.861532034334199,1.90517476513229,0.231768651889711,0,0.824171801606613,0.441596760403192,0,0.532427418478012,0.715308569841963,0.290692833264657,0.752875043322645,0.676916863133412,0.73171189149109,0.526139422875686,0.679020569229309,0,0.237270036248348,0.788035859004508,0.409231043169689,0.309873682371932,0.385813221962283,0,0.233931608445408,0.644613162144895,0.57386499620653,0,0.695603506861264 | |||
|short_description=p4@Eef1a1 | |||
}} |
Revision as of 18:50, 14 September 2013
Short description: | p4@Eef1a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Eef1a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | -48bp_to_ENSMUST00000126614, ENSMUST00000144523_5end |
EntrezGene: | Eef1a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.78e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 7.72e-21 | 22 |
epithelial sac | 7.72e-21 | 22 |
digestive gland | 7.72e-21 | 22 |
epithelium of foregut-midgut junction | 7.72e-21 | 22 |
anatomical boundary | 7.72e-21 | 22 |
hepatobiliary system | 7.72e-21 | 22 |
foregut-midgut junction | 7.72e-21 | 22 |
hepatic diverticulum | 7.72e-21 | 22 |
liver primordium | 7.72e-21 | 22 |
septum transversum | 7.72e-21 | 22 |
liver bud | 7.72e-21 | 22 |
digestive tract diverticulum | 1.02e-19 | 23 |
sac | 1.02e-19 | 23 |
exocrine gland | 9.47e-18 | 25 |
exocrine system | 9.47e-18 | 25 |
trunk mesenchyme | 3.19e-11 | 45 |
epithelial tube | 1.62e-10 | 47 |
endoderm-derived structure | 1.88e-10 | 118 |
endoderm | 1.88e-10 | 118 |
presumptive endoderm | 1.88e-10 | 118 |
unilaminar epithelium | 9.18e-10 | 66 |
gut epithelium | 1.50e-09 | 55 |
digestive system | 4.44e-09 | 116 |
digestive tract | 4.44e-09 | 116 |
primitive gut | 4.44e-09 | 116 |
subdivision of digestive tract | 8.76e-08 | 114 |
mesenchyme | 9.01e-08 | 61 |
entire embryonic mesenchyme | 9.01e-08 | 61 |
abdomen element | 9.50e-08 | 49 |
abdominal segment element | 9.50e-08 | 49 |
abdominal segment of trunk | 9.50e-08 | 49 |
abdomen | 9.50e-08 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.