FFCP PHASE1:Hg19::chr1:3371210..3371219,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27237 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15515 | |||
|TSSclassifier=strong | |||
|UniProt=B3KTS4,Q5VV41 | |||
|association_with_transcript=63bp_to_NM_014448,uc001akg.3_5end | |||
|coexpression_cluster_id=C3973 | |||
|description=CAGE_peak_9_at_ARHGEF16_5end | |||
|id=chr1:3371210..3371219,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.13e-15!254;CL:0000223!5.57e-12!59;CL:0002076!5.72e-10!43;CL:0002322!6.67e-09!5;CL:0000039!4.19e-08!7;CL:0000586!4.19e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.35e-23;5!CL:0000313;9.72e-14;1!CL:0000039;3.83e-08;7!CL:0000586;3.83e-08;7!CL:0002321;5.12e-08;15!CL:0000159;1.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.56e-23,5;CL:0000313,1.25e-13,1;CL:0000039,3.57e-08,7;CL:0000586,3.57e-08,7;CL:0000159,1.87e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;9.72e-14;1!UBERON:0009117;6.99e-12;10!UBERON:0005564;6.99e-12;10 | |||
|ontology_enrichment_disease=DOID:305!2.01e-31!106;DOID:0050687!1.24e-25!143;DOID:162!7.66e-13!235;DOID:14566!1.04e-12!239;DOID:1749!5.64e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2152;9.72e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.25e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.30e-17!169;UBERON:0000925!8.30e-17!169;UBERON:0006595!8.30e-17!169;UBERON:0001007!1.40e-16!155;UBERON:0001555!1.40e-16!155;UBERON:0007026!1.40e-16!155;UBERON:0004921!2.23e-15!129;UBERON:0004185!2.23e-15!129;UBERON:0000077!5.48e-11!130;UBERON:0000065!7.08e-10!53;UBERON:0005409!1.11e-09!35;UBERON:0001004!2.66e-09!72;UBERON:0008947!3.58e-09!38;UBERON:0003258!3.58e-09!38;UBERON:0001041!3.31e-08!98;UBERON:0000160!7.23e-08!27;UBERON:0001737!8.85e-08!9;UBERON:0000072!2.09e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;9.72e-14;1!UBERON:0005409;5.04e-09;22!UBERON:0004909;1.64e-07;2!UBERON:0000922;2.96e-07;49!UBERON:0000473;3.14e-07;8!UBERON:0000160;7.83e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.25e-13,1;UBERON:0005409,5.18e-08,25;UBERON:0004909,1.87e-07,2;UBERON:0000473,2.95e-07,8;UBERON:0000160,7.53e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,1.70763188581434,1.59035721985782,1.16193942869518,0.414644220061482,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0.674338760312407,0,0.220587945464788,0.217879444092406,0.474541238222193,0.539325232640658,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,1.8714054040822,0,0,0,0,0.23874448473769,0.593929361665277,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.61221999997337,0,0.568967241427498,0,1.65471377237555,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0.46112780877612,0.0897576444097721,0.760531603454056,0.31900115973192,0.183195186803725,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,1.32686346755009,0.611030144933625,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0.284609546029793,0,0.520679215005393,0.195984794828755,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.0969890164884194,0.176512253383001,0.225980740780532,0,0,0,0.782205530939212,0,1.49417096317547,0.19980960958213,0.576361668616424,0,0,0.14405479798815,0.124252535565433,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.236349546921671,0,0.0674035438541849,0.196854963029498,0,0,0,0.482259445395058,0.550157746388935,0,0,0,0,0,0.236417121897595,0.419636705079985,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.353909170043221,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0.523813388962845,0,0.443568258651136,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0.443511850813194,0,0,0.0679697329768317,0,0,0.111231401892069,0.156986185701028,0,0,1.82631744101899,0,0.47775168788705,0.0714765441766563,0.316027223465453,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0.846774100381858,0,0,0,1.4541206133713,0.392600934460972,0.365753774946808,0,0,0,0,0.467878926924211,0.397901550322736,0,0.45178432815584,0,0,2.70109553377806,0.437119121007915,1.41095188908457,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0,0.160482733378337,2.19100916473955,0,0,0,0,0,0.5290268405154,0,0,0,0.252332849670158,0.218531143927391,0.126698501011437,0.815910637935854,1.60330443159336,2.29737248837112,0,0.151557396436479,0,0,0,0.213233981900981,0.714193294391221,0,0,0,0.25458863311266,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.286888821570705,0.332660356546013,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p9@ARHGEF16 | |||
}} |
Revision as of 15:58, 10 January 2014
Short description: | p9@ARHGEF16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ARHGEF16_5end |
Coexpression cluster: | C3973_bronchogenic_chorionic_hepatoblastoma_small_testicular_rectum_adenocarcinoma |
Association with transcript: | 63bp_to_NM_014448, uc001akg.3_5end |
EntrezGene: | ARHGEF16 |
HGNC: | 15515 |
UniProt: | B3KTS4Q5VV41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.56e-23 | 5 |
serous secreting cell | 1.25e-13 | 1 |
germ line cell | 3.57e-08 | 7 |
germ cell | 3.57e-08 | 7 |
seromucus secreting cell | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.25e-13 | 1 |
gastrointestinal system | 5.18e-08 | 25 |
epithelium of gonad | 1.87e-07 | 2 |
testis | 2.95e-07 | 8 |
intestine | 7.53e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.25e-13 | 1 |