FFCP PHASE1:Hg19::chr1:9005917..9005935,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=765 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1380 | |||
|TSSclassifier=not | |||
|UniProt=Q8N4G4,F8W148,P23280,Q5FC00 | |||
|association_with_transcript=0bp_to_ENST00000319474,ENST00000475703,ENST00000476083,ENST00000549778,NM_001215,uc001apm.2,uc009vmn.2_5end | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_1_at_CA6_5end | |||
|id=chr1:9005917..9005935,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;3.74e-10;1!UBERON:0006298;4.09e-10;1!UBERON:0000358;1.42e-09;1!UBERON:0004874;1.42e-09;1 | |||
|ontology_enrichment_disease=DOID:3493!5.59e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.13e-17;2!DOID:0050619;2.26e-09;1!DOID:1357;2.26e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.23e-17,2;DOID:0050619,2.67e-09,1;DOID:1357,2.67e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003408!1.71e-20!10;UBERON:0001044!1.37e-14!6;UBERON:0003293!1.37e-14!6;UBERON:0003294!1.37e-14!6;UBERON:0010047!1.37e-14!6;UBERON:0000167!1.37e-14!6;UBERON:0007023!6.10e-12!115;UBERON:0001042!1.43e-11!10;UBERON:0009145!1.43e-11!10;UBERON:0000078!3.06e-11!18;UBERON:0006562!1.88e-10!11;UBERON:0000166!2.03e-09!21;UBERON:0001829!2.46e-08!2;UBERON:0001004!3.35e-08!72;UBERON:0003127!5.78e-08!2;UBERON:0002370!1.03e-07!4;UBERON:0005058!1.03e-07!4;UBERON:0009113!1.03e-07!4;UBERON:0003295!1.03e-07!4;UBERON:0005562!1.03e-07!4;UBERON:0008814!2.31e-07!15;UBERON:0000153!3.90e-07!129;UBERON:0007811!3.90e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;3.52e-23;6!UBERON:0003293;3.52e-23;6!UBERON:0003294;3.52e-23;6!UBERON:0010047;3.52e-23;6!UBERON:0003408;3.52e-23;6!UBERON:0000167;3.52e-23;6!UBERON:0001829;1.59e-18;2!UBERON:0003127;1.46e-17;2!UBERON:0001041;3.37e-15;14!UBERON:0000165;3.17e-14;28!UBERON:0001723;2.03e-12;3!UBERON:0001033;2.03e-12;3!UBERON:0000161;3.81e-11;19!UBERON:0000166;3.81e-11;19!UBERON:0001831;3.74e-10;1!UBERON:0001567;3.74e-10;1!UBERON:0001736;4.09e-10;1!UBERON:0007029;6.31e-10;1!UBERON:0002372;8.90e-10;1!UBERON:0001961;8.90e-10;1!UBERON:0001744;8.90e-10;1!UBERON:0001042;8.90e-10;1!UBERON:0001735;8.90e-10;1!UBERON:0000989;1.42e-09;1!UBERON:0008811;1.42e-09;1!UBERON:0001764;2.26e-09;1!UBERON:0001825;2.26e-09;1!UBERON:0004921;1.06e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,4.06e-23,6;UBERON:0003293,4.06e-23,6;UBERON:0003294,4.06e-23,6;UBERON:0010047,4.06e-23,6;UBERON:0000167,4.06e-23,6;UBERON:0001829,1.59e-18,2;UBERON:0000166,2.78e-18,22;UBERON:0003127,1.34e-17,2;UBERON:0003408,5.76e-14,10;UBERON:0000165,1.09e-13,29;UBERON:0000930,1.09e-13,29;UBERON:0001723,2.03e-12,3;UBERON:0001033,2.03e-12,3;UBERON:0010056,2.03e-12,3;UBERON:0001004,5.62e-12,74;UBERON:0000161,7.10e-11,36;UBERON:0001831,3.74e-10,1;UBERON:0001567,3.74e-10,1;UBERON:0008801,3.74e-10,1;UBERON:0001736,4.09e-10,1;UBERON:0006298,4.09e-10,1;UBERON:0001041,5.65e-10,87;UBERON:0007029,6.31e-10,1;UBERON:0002372,8.91e-10,1;UBERON:0001961,8.91e-10,1;UBERON:0001744,8.91e-10,1;UBERON:0001735,8.91e-10,1;UBERON:0000989,1.15e-09,1;UBERON:0008811,1.15e-09,1;UBERON:0006258,1.15e-09,1;UBERON:0005876,1.15e-09,1;UBERON:0004874,1.15e-09,1;UBERON:0001764,2.67e-09,1;UBERON:0001825,2.67e-09,1;UBERON:0000033,1.25e-08,56;UBERON:0001042,3.14e-08,10;UBERON:0009145,3.14e-08,10;UBERON:0001444,8.86e-08,49;UBERON:0000153,1.08e-07,62;UBERON:0007811,1.08e-07,62;UBERON:0006562,1.60e-07,11;UBERON:0004921,8.36e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67498392625085,0,0,1.94826728407911,0.779873198196215,0,0,0,1.79327847615945,5.46249259751489,0.493313713811028,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25102380848902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,42279.9942067253,2.97726707033577,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0,2.07377898544228,11704.3352967057,0,0,0.423387050190929,0,0,0,0,5.00566191437739,2.56027642462766,0,0,0,13.5999078056559,0.233939463462106,0,0,0,0,14.0395444517006,0,0,352.267654974781,0,0,0,0,0,0,0,0,0,0,0,0,0,18984.9701229803,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.803892390468535,0,0,0,0,0.516711278688049,0.186224142887574,0,0,0.606351566874658,21.9893915375931,7.52913262387618,4.91669987006489,3.9447212965972,2.66128285236811,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p1@CA6 | |||
}} |
Revision as of 16:11, 10 January 2014
Short description: | p1@CA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CA6_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 0bp_to_ENST00000319474, ENST00000475703, ENST00000476083, ENST00000549778, NM_001215, uc001apm.2, uc009vmn.2_5end |
EntrezGene: | CA6 |
HGNC: | 1380 |
UniProt: | Q8N4G4F8W148P23280Q5FC00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.23e-17 | 2 |
paranasal sinus cancer | 2.67e-09 | 1 |
maxillary sinus cancer | 2.67e-09 | 1 |