FFCP PHASE1:Hg19::chr1:17914907..17914946,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55160 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25540 | |||
|TSSclassifier=strong | |||
|UniProt=B4DTE2 | |||
|association_with_transcript=0bp_to_ENST00000375420,uc010ocr.1_5end | |||
|description=CAGE_peak_6_at_ARHGEF10L_5end | |||
|id=chr1:17914907..17914946,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.81e-21;19!CL:0002577;2.92e-09;3!CL:0002536;5.30e-07;2!CL:0002569;8.22e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.27e-21,19;CL:0002577,2.82e-09,3;CL:0002536,5.32e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.48e-07!27;UBERON:0000478!5.70e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;5.20e-19;24!UBERON:0000305;2.45e-10;7!UBERON:0005631;1.25e-09;10!UBERON:0000158;1.25e-09;10!UBERON:0005409;4.17e-09;22!UBERON:0000160;9.88e-08;17!UBERON:0001987;5.15e-07;4!UBERON:0003422;8.22e-07;6!UBERON:0004921;8.65e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,7.50e-19,24;UBERON:0005631,8.82e-15,14;UBERON:0000158,8.82e-15,14;UBERON:0000305,2.47e-10,7;UBERON:0004871,5.63e-09,8;UBERON:0005409,5.67e-08,25;UBERON:0000160,6.64e-08,17;UBERON:0001987,5.02e-07,4;UBERON:0004340,5.02e-07,4 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,1.34088328328186,1.74467704820074,0,0,0,0,0,15.2908960491121,9.75937819445278,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.464448369948228,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0,0.605429710579726,0.576175924479999,0,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0.368502951935304,0,0,0.494533858557114,0,1.43723628363248,0,0.375355559615893,0.831192346452549,0.438977620880838,0.612975591598039,0.150238058906597,0,0,0.85422955527427,0.211931901159562,0.600182192168805,0.309157587715317,1.28820270022815,0,0.506328996723799,0.68205903612839,1.00973509697646,0.736399189138395,0,0.355009592516614,0,0.67824236924195,0.193260853163297,0,0,0.121973706129595,0.265059536642971,0.929551542956147,0.725627385107593,0.504641701751257,0.36497735907583,0,0.643240938192885,1.38134921352481,0.928735856063958,0.721879481669586,1.0647612003586,0.168584690078102,0.241011029883482,0.55146986366197,1.08939722046203,0.71181185733329,0.404493924480493,0,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,2.45976877086227,0,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0.695582429850461,0.117408694235822,0.144366447761074,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,1.17217447210047,0,0.102827492703324,0.300343057843917,0,0,0,0.2933531432838,0.258543431515556,7.15312891703765,0,0,0,0.257207374262142,0,0.266422179016099,0,1.08524321078289,2.46972101034231,0.325736184293735,0,0,0.602878754119172,0,0,0,0,0,2.63587341040741,1.14861935834114,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0,1.45579603071565,0.178428988797162,0.315404830067869,0.117141414992713,0,0,1.03473071292505,0,0,0.260650843404249,5.286631251494,2.40200396667599,0,0,0,5.45629628603267,3.32870879020994,7.86214762657169,0,0.153461973288062,0.561320188866147,0,0,0,0,0,0.177561725313127,0.328508624055237,0.519254429183621,0.348631135379878,2.77976734060731,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.512900250232778,0.656029291399411,0.325378394664303,0.515205058238611,2.38080608527693,3.21787049690293,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.429680979473094,0,0,0.445160178233687,0,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0,0.42793898803392,0,0,0.359744915166629,0.54907405947211,0.235624804691373,0.202182481573316,0,0,0.975267478179181,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,1.31178950409327,0,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0.379473173765715,0.699869440489966,0.0962221127255121,0.670302275535787,0,0.470719003883896,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0.313359791546046,0,0,0,0,2.12923118845163,0.343505344755765,0.307240764308458,0.223676107892416,0.166849141711909,5.86164286206121,0,0,0,0,0,0.37428108081644,0.73254089635947,0,4.45773537109913,0,3.58116727106535,15.1451987224646,6.45037474408387,0,0.140669416410513,0,0,0.211125408127993,6.77443160053637,0.552567831062295,4.78672220923124,0.409074730008619,0,0.933118762985422,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0.945550727071745,0.689486746482929,0,0.173624994933292,0.885741385813839,0,0,0,0,0.219385397153973,0,0.139423744278603,0.0769502585037971,0.113942055847001,4.15015027898508,1.88491053260521,1.62971057883012,1.27600463892768,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.565412285735763,0.216388639742091,4.97630965539252,1.50377859655677,0,0,0,0,0.134802265961354,0,0,0.182454789215666,0.391329237864179,0,0,1.20990716048664,0,0.189559738885464,0.150323419414493,0,0,0.330991955875499,0,0,0,0.277349346026277,0,0.195984794828755,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0,0,0.596143835108969,0.126621591911757,1.17330829640882,0,0.213452994739353,2.19790570540343,2.73771792592801,0,1.71594997861965,0,0,0.471388069233591,0.271808412147228,0.209205692624666,0.101998217636322,0.577901179803038,0.600420288709789,0,0,0.859530882839914,0,0.837847203816763,2.06244381610515,0,1.59743200399193,2.14613024068285,1.33902874465124,0.739018197353989,0,0,0.236349546921671,0.659326867049332,0.539228350833479,0.196854963029498,0,0,0.272406812223151,1.44677833618517,0,0,0.2249738915515,0,0.0607495566580247,1.34173875039706,0.236417121897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| |||
|short_description=p6@ARHGEF10L | |||
}} |
Revision as of 16:40, 10 January 2014
Short description: | p6@ARHGEF10L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARHGEF10L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375420, uc010ocr.1_5end |
EntrezGene: | ARHGEF10L |
HGNC: | 25540 |
UniProt: | B4DTE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.27e-21 | 19 |
placental epithelial cell | 2.82e-09 | 3 |
amniotic epithelial cell | 5.32e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 7.50e-19 | 24 |
extraembryonic membrane | 8.82e-15 | 14 |
membranous layer | 8.82e-15 | 14 |
amnion | 2.47e-10 | 7 |
somatic layer of lateral plate mesoderm | 5.63e-09 | 8 |
gastrointestinal system | 5.67e-08 | 25 |
intestine | 6.64e-08 | 17 |
placenta | 5.02e-07 | 4 |
allantois | 5.02e-07 | 4 |