FFCP PHASE1:Hg19::chr1:20141662..20141673,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54546 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25978 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NXI6 | |||
|association_with_transcript=97bp_to_ENST00000375121,NM_019062,uc001bcr.2_5end | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_4_at_RNF186_5end | |||
|id=chr1:20141662..20141673,- | |||
|ontology_enrichment_celltype=CL:0000313!4.87e-09!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.69e-19;1!UBERON:0007297;1.80e-10;2 | |||
|ontology_enrichment_disease=DOID:2152!4.87e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.59e-27!27;UBERON:0000059!4.31e-26!11;UBERON:0001155!1.85e-22!9;UBERON:0005409!4.63e-21!35;UBERON:0004907!5.91e-15!5;UBERON:0006947!6.38e-12!3;UBERON:0004054!6.38e-12!3;UBERON:0001301!9.44e-10!1;UBERON:0004921!1.26e-09!129;UBERON:0004185!1.26e-09!129;UBERON:0001154!1.69e-09!1;UBERON:0001153!1.69e-09!1;UBERON:0000998!2.16e-09!1;UBERON:0006868!2.16e-09!1;UBERON:0005904!3.68e-09!4;UBERON:0004911!4.87e-09!1;UBERON:0002108!5.03e-09!14;UBERON:0001052!7.58e-09!4;UBERON:0001007!1.32e-07!155;UBERON:0001555!1.32e-07!155;UBERON:0007026!1.32e-07!155;UBERON:0003135!3.89e-07!11;UBERON:0001046!6.67e-07!19;UBERON:0004119!8.97e-07!169;UBERON:0000925!8.97e-07!169;UBERON:0006595!8.97e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.96e-48;17!UBERON:0005409;9.34e-38;22!UBERON:0002108;9.25e-33;4!UBERON:0001155;3.34e-32;9!UBERON:0000059;1.91e-26;11!UBERON:0004921;5.03e-23;33!UBERON:0001301;1.42e-19;1!UBERON:0001154;4.69e-19;1!UBERON:0001153;4.69e-19;1!UBERON:0009854;4.69e-19;1!UBERON:0001555;1.31e-09;54!UBERON:0006947;2.12e-07;3!UBERON:0004054;2.12e-07;3!UBERON:0002114;2.63e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.96e-48,17;UBERON:0005409,2.17e-33,25;UBERON:0002108,8.30e-33,4;UBERON:0001155,3.62e-32,9;UBERON:0000059,2.04e-26,11;UBERON:0001301,1.30e-19,1;UBERON:0001154,4.69e-19,1;UBERON:0001153,4.69e-19,1;UBERON:0001045,4.69e-19,1;UBERON:0007023,2.05e-07,114;UBERON:0006947,2.05e-07,3;UBERON:0004054,2.05e-07,3;UBERON:0002114,2.47e-07,2;UBERON:0004921,4.66e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76283915531148,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,3.98104772431402,4.42287822516696,28.1073866669468,0,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0,0,0,7.5132467344073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.4919253160543,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4117942358949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,6.01958433241968,1.5299169235277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7612415646386,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@RNF186 | |||
}} |
Revision as of 16:45, 10 January 2014
Short description: | p4@RNF186 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RNF186_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 97bp_to_ENST00000375121, NM_019062, uc001bcr.2_5end |
EntrezGene: | RNF186 |
HGNC: | 25978 |
UniProt: | Q9NXI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.96e-48 | 17 |
gastrointestinal system | 2.17e-33 | 25 |
small intestine | 8.30e-33 | 4 |
colon | 3.62e-32 | 9 |
large intestine | 2.04e-26 | 11 |
epididymis | 1.30e-19 | 1 |
vermiform appendix | 4.69e-19 | 1 |
caecum | 4.69e-19 | 1 |
midgut | 4.69e-19 | 1 |
adult organism | 2.05e-07 | 114 |
male genital duct | 2.05e-07 | 3 |
internal male genitalia | 2.05e-07 | 3 |
duodenum | 2.47e-07 | 2 |
subdivision of digestive tract | 4.66e-07 | 118 |