FFCP PHASE1:Hg19::chr1:94240846..94240855,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=74bp_to_uc001dqd.1_5end | |||
|coexpression_cluster_id=C225 | |||
|description=CAGE_peak_5_at_uc001dqd.1_5end | |||
|id=chr1:94240846..94240855,- | |||
|ontology_enrichment_celltype=CL:0002076!5.19e-27!43;CL:0000223!2.03e-21!59;CL:0000066!2.06e-20!254;CL:0002159!1.06e-18!13;CL:0002368!1.06e-18!13;CL:0002166!7.97e-17!3;CL:0002621!3.98e-16!3;CL:0002327!7.89e-12!4;CL:0000317!3.16e-11!2;CL:1000448!3.16e-11!2;CL:0002308!3.16e-11!2;CL:0002140!3.16e-11!2;CL:0002251!4.08e-11!21;CL:0000622!7.38e-10!5;CL:0002202!1.51e-09!9;CL:0002632!1.51e-09!9;CL:0000154!2.75e-08!6;CL:0000068!3.53e-08!3;CL:0000069!3.53e-08!3;CL:0000307!3.53e-08!3;CL:0000377!3.53e-08!3;CL:0002328!8.93e-08!3;CL:0002231!1.02e-07!3;CL:0000220!1.98e-07!246;CL:0002321!2.51e-07!248;CL:0002077!8.47e-07!33;CL:0002336!9.30e-07!1;CL:0002261!9.30e-07!1;CL:0002170!9.30e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.82e-27;3!CL:0000307;2.23e-27;3!CL:0002336;3.12e-21;1!CL:0002261;3.12e-21;1!CL:0002170;3.12e-21;1!CL:0002368;1.98e-14;13!CL:0002202;8.27e-10;9!CL:0002632;8.27e-10;9!CL:0002076;5.09e-09;42!CL:0002231;7.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.39e-27,3;CL:0000068,2.08e-27,3;CL:0000069,2.08e-27,3;CL:0000307,2.08e-27,3;CL:0000377,2.08e-27,3;CL:0002336,3.45e-21,1;CL:0002261,3.45e-21,1;CL:0002170,3.45e-21,1;CL:0002368,2.08e-14,13;CL:0000223,2.85e-12,58;CL:0002076,6.33e-12,42;CL:0002202,8.09e-10,9;CL:0002632,8.09e-10,9;CL:0002231,7.76e-08,3;CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000377;2.23e-27;3!CL:0000223;2.59e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4074;1.82e-11;2!DOID:4905;1.82e-11;2!DOID:3498;1.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.82e-11,2;DOID:4905,1.82e-11,2;DOID:3498,1.82e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001949!3.98e-16!3;UBERON:0001708!9.65e-13!4;UBERON:0001704!9.65e-13!4;UBERON:0001911!7.89e-12!4;UBERON:0005333!7.89e-12!4;UBERON:0008425!7.89e-12!4;UBERON:0005311!7.89e-12!4;UBERON:0002419!3.16e-11!2;UBERON:0007771!3.16e-11!2;UBERON:0003297!3.16e-11!2;UBERON:0001821!3.16e-11!2;UBERON:0003487!3.16e-11!2;UBERON:0001820!3.16e-11!2;UBERON:0005089!3.16e-11!2;UBERON:0005088!3.16e-11!2;UBERON:0000161!4.32e-10!35;UBERON:0000365!1.51e-09!5;UBERON:0003102!1.15e-08!95;UBERON:0002090!1.23e-08!6;UBERON:0004119!1.57e-08!169;UBERON:0000925!1.57e-08!169;UBERON:0006595!1.57e-08!169;UBERON:0005910!4.97e-08!6;UBERON:0001004!7.44e-08!72;UBERON:0004815!8.93e-08!3;UBERON:0002031!8.93e-08!3;UBERON:0005085!1.50e-07!29;UBERON:0005153!1.88e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;7.00e-21;4!UBERON:0008895;7.00e-21;4!UBERON:0011159;6.40e-17;5!UBERON:0003126;2.44e-12;7!UBERON:0001005;2.44e-12;7!UBERON:0011137;3.25e-08;11!UBERON:0010323;3.25e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,5.72e-21,4;UBERON:0008895,5.72e-21,4;UBERON:0011159,5.45e-17,5;UBERON:0010188,2.49e-14,6;UBERON:0002539,2.49e-14,6;UBERON:0008816,2.49e-14,6;UBERON:0003126,2.37e-12,7;UBERON:0001005,2.37e-12,7;UBERON:0010323,3.03e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.818238361772504,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.548751427043128,0,0,2.31471112896324,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0.839910640994298,2.69372684760534,0.0895585227028483,0.290633938513962,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0.576570202095319,2.16941611240793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34710957815717,3.35151137767894,0,0.0941438007767792,0,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3240423925115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,1.00838358591705,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@uc001dqd.1 | |||
}} |
Revision as of 19:37, 10 January 2014
Short description: | p5@uc001dqd.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_uc001dqd.1_5end |
Coexpression cluster: | C225_ductal_alveolar_giant_prostate_salivary_squamous_Tracheal |
Association with transcript: | 74bp_to_uc001dqd.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.39e-27 | 3 |
duct epithelial cell | 2.08e-27 | 3 |
branched duct epithelial cell | 2.08e-27 | 3 |
tracheal epithelial cell | 2.08e-27 | 3 |
tracheoblast | 2.08e-27 | 3 |
buccal mucosa cell | 3.45e-21 | 1 |
endothelial cell of viscerocranial mucosa | 3.45e-21 | 1 |
keratinized cell of the oral mucosa | 3.45e-21 | 1 |
respiratory epithelial cell | 2.08e-14 | 13 |
endodermal cell | 2.85e-12 | 58 |
endo-epithelial cell | 6.33e-12 | 42 |
epithelial cell of tracheobronchial tree | 8.09e-10 | 9 |
epithelial cell of lower respiratory tract | 8.09e-10 | 9 |
epithelial cell of prostate | 7.76e-08 | 3 |
epithelial cell | 2.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 5.72e-21 | 4 |
splanchnocranium | 5.72e-21 | 4 |
primary subdivision of cranial skeletal system | 5.45e-17 | 5 |
protuberance | 2.49e-14 | 6 |
pharyngeal arch | 2.49e-14 | 6 |
embryonic head | 2.49e-14 | 6 |
trachea | 2.37e-12 | 7 |
respiratory airway | 2.37e-12 | 7 |
cranial skeletal system | 3.03e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.82e-11 | 2 |
pancreatic carcinoma | 1.82e-11 | 2 |
pancreatic ductal adenocarcinoma | 1.82e-11 | 2 |