FFCP PHASE1:Hg19::chr1:163042618..163042628,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:163042618..163042628,+ | |||
|id=chr1:163042618..163042628,+ | |||
|ontology_enrichment_celltype=CL:0000359!2.23e-12!32;CL:0000192!2.70e-09!42;CL:0000514!2.70e-09!42;CL:0000680!5.66e-08!57;CL:0000056!5.66e-08!57;CL:0000355!5.66e-08!57;CL:0000187!5.77e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002579;2.38e-12;3!CL:1000306;1.73e-09;4!CL:0002547;1.73e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,3.37e-12,3;CL:1000306,1.73e-09,4;CL:0002547,1.73e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.60e-08;10 | |||
|ontology_enrichment_disease=DOID:2394!2.44e-13!14;DOID:120!8.14e-07!27;DOID:0060084!8.15e-07!3;DOID:127!8.15e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.24e-27;3!DOID:127;4.24e-27;3!DOID:0060072;1.71e-20;4!DOID:2394;4.17e-10;14!DOID:120;7.36e-08;27!DOID:193;2.64e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.98e-27,3;DOID:127,2.98e-27,3;DOID:0060072,1.32e-20,4;DOID:2394,4.32e-10,14;DOID:120,8.24e-08,27;DOID:193,2.93e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0002619!4.71e-16!22;UBERON:0001950!5.13e-16!20;UBERON:0002020!2.82e-14!34;UBERON:0003528!2.82e-14!34;UBERON:0001869!5.32e-14!32;UBERON:0000956!1.22e-13!25;UBERON:0000203!1.22e-13!25;UBERON:0002616!1.54e-13!59;UBERON:0002791!2.02e-13!33;UBERON:0001637!4.93e-13!42;UBERON:0003509!4.93e-13!42;UBERON:0004572!4.93e-13!42;UBERON:0001893!7.06e-13!34;UBERON:0002780!2.06e-12!41;UBERON:0001890!2.06e-12!41;UBERON:0006240!2.06e-12!41;UBERON:0000025!2.39e-12!194;UBERON:0003080!5.54e-12!42;UBERON:0001049!6.28e-12!57;UBERON:0005068!6.28e-12!57;UBERON:0006241!6.28e-12!57;UBERON:0007135!6.28e-12!57;UBERON:0003075!9.48e-12!86;UBERON:0007284!9.48e-12!86;UBERON:0000955!2.69e-11!69;UBERON:0006238!2.69e-11!69;UBERON:0002346!7.87e-11!90;UBERON:0002049!1.25e-10!79;UBERON:0007798!1.25e-10!79;UBERON:0005743!3.99e-10!86;UBERON:0001017!4.00e-10!82;UBERON:0003056!6.41e-10!61;UBERON:0001981!7.09e-10!60;UBERON:0007500!7.09e-10!60;UBERON:0004537!7.09e-10!60;UBERON:0006965!7.09e-10!60;UBERON:0004872!1.29e-09!84;UBERON:0004535!2.44e-09!110;UBERON:0000073!3.21e-09!94;UBERON:0001016!3.21e-09!94;UBERON:0000119!3.95e-09!312;UBERON:0002118!4.34e-09!5;UBERON:0004532!4.34e-09!5;UBERON:0000483!6.79e-09!309;UBERON:0001009!7.61e-09!113;UBERON:0000055!1.45e-08!69;UBERON:0004573!1.62e-08!33;UBERON:0004571!1.62e-08!33;UBERON:0004111!4.37e-08!241;UBERON:0000477!5.44e-08!286;UBERON:0001134!4.33e-07!61;UBERON:0002036!4.33e-07!61;UBERON:0003082!4.33e-07!61;UBERON:0001871!9.40e-07!7;UBERON:0000033!9.56e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.73e-09;4!UBERON:0000415;1.73e-09;4!UBERON:0007240;1.73e-09;4!UBERON:0005742;1.73e-09;4!UBERON:0005734;1.73e-09;4!UBERON:0004664;1.73e-09;4!UBERON:0004663;1.73e-09;4!UBERON:0003134;1.34e-08;33!UBERON:0000995;1.86e-08;17!UBERON:0003975;5.39e-08;18!UBERON:0001637;7.58e-08;42!UBERON:0003509;7.58e-08;42!UBERON:0004572;7.58e-08;42!UBERON:0002118;9.22e-08;5!UBERON:0001950;6.00e-07;20!UBERON:0004175;7.19e-07;21!UBERON:0000474;8.24e-07;37!UBERON:0000200;8.51e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.73e-09,4;UBERON:0007240,1.73e-09,4;UBERON:0005742,1.73e-09,4;UBERON:0005734,1.73e-09,4;UBERON:0004664,1.73e-09,4;UBERON:0004663,1.73e-09,4;UBERON:0001637,1.93e-09,42;UBERON:0003509,1.93e-09,42;UBERON:0004572,1.93e-09,42;UBERON:0003134,5.40e-08,37;UBERON:0000474,5.40e-08,37;UBERON:0002118,9.23e-08,5;UBERON:0003100,3.62e-07,41;UBERON:0001950,5.68e-07,20;UBERON:0000995,7.43e-07,21;UBERON:0000200,7.47e-07,6 | |||
|phase1_expression=0.54503513781167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41077811209591,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10047216776027,0.835979866147242,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,1.01304409331664,0,0.573673241497627,1.77334191099179,0,0,0.74000264525148,0,0.269421344139376,0.326923806226917,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,1.89948683245908,0,0,0,0.718874566474748,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0,0.553107505625109,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,1.02341449813341,1.12597744800525,0,0.308419387605311,0.532685175939381,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0,0.37064843820784,2.57624796135584,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,4.38450885253763,0,0,0.405820753925408,2.78841148289775,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,0,0.994147647766298,0.281338832821026,0,0,0.63337622438398,0,0,1.0077309914171,0,0,0.622079175323615,0,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,1.75508317723178,0,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.937057782901357,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,3.80099721227599,3.45688596480507,1.63293680054705,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,4.75902433117656,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.568209015825267,0.251567901752575,0,0.228840068396924,0.302461847526478,0,0.295710299979268,0.159296767163702,0,0,0.829412415681711,1.32920857278997,0.521745061811734,0.601030435988874,3.04644169735036,0.813741466409323,0.181848659202559,0.859284456339908,1.39210127963548,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0.578742114812744,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.0642292250964595,0,0.159633859057151,2.46139637088906,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,3.12431239445539,0.826747186004736,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:163042618..163042628,+ | |||
}} |
Revision as of 21:59, 10 January 2014
Short description: | p@chr1:163042618..163042628, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:163042618..163042628, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 3.37e-12 | 3 |
fibroblast of tunica adventitia of artery | 1.73e-09 | 4 |
fibroblast of the aortic adventitia | 1.73e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.73e-09 | 4 |
tunica adventitia of artery | 1.73e-09 | 4 |
adventitia | 1.73e-09 | 4 |
tunica adventitia of blood vessel | 1.73e-09 | 4 |
aorta tunica adventitia | 1.73e-09 | 4 |
aorta wall | 1.73e-09 | 4 |
artery | 1.93e-09 | 42 |
arterial blood vessel | 1.93e-09 | 42 |
arterial system | 1.93e-09 | 42 |
female reproductive organ | 5.40e-08 | 37 |
female reproductive system | 5.40e-08 | 37 |
right ovary | 9.23e-08 | 5 |
female organism | 3.62e-07 | 41 |
neocortex | 5.68e-07 | 20 |
uterus | 7.43e-07 | 21 |
gyrus | 7.47e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.98e-27 | 3 |
leiomyoma | 2.98e-27 | 3 |
benign neoplasm | 1.32e-20 | 4 |
ovarian cancer | 4.32e-10 | 14 |
female reproductive organ cancer | 8.24e-08 | 27 |
reproductive organ cancer | 2.93e-07 | 29 |