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{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3265|description=CAGE_peak_at_chr1:237207955..237207959,+|id=chr1:237207955..237207959,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005062;4.36e-50;4!UBERON:0007284;4.36e-50;4!UBERON:0000358;1.49e-23;1!UBERON:0004140;1.49e-23;1!UBERON:0006603;4.16e-07;65!UBERON:0003104;6.03e-07;31|ontology_enrichment_disease=DOID:114!3.19e-07!2|ontology_enrichment_disease_v019=DOID:114;2.90e-12;2!DOID:1287;9.10e-07;4|ontology_enrichment_disease_v019_2=DOID:114,2.59e-12,2;DOID:1287,8.61e-07,4|ontology_enrichment_uberon=UBERON:0007023!3.23e-44!115;UBERON:0001049!5.34e-37!57;UBERON:0005068!5.34e-37!57;UBERON:0006241!5.34e-37!57;UBERON:0007135!5.34e-37!57;UBERON:0001017!5.04e-35!82;UBERON:0000073!5.38e-35!94;UBERON:0001016!5.38e-35!94;UBERON:0005743!5.53e-33!86;UBERON:0002616!7.99e-33!59;UBERON:0002780!2.19e-30!41;UBERON:0001890!2.19e-30!41;UBERON:0006240!2.19e-30!41;UBERON:0002346!4.34e-30!90;UBERON:0003075!6.48e-30!86;UBERON:0007284!6.48e-30!86;UBERON:0003080!1.57e-29!42;UBERON:0000955!1.73e-28!69;UBERON:0006238!1.73e-28!69;UBERON:0001869!7.98e-27!32;UBERON:0002020!3.41e-25!34;UBERON:0003528!3.41e-25!34;UBERON:0001893!5.39e-25!34;UBERON:0002791!3.10e-23!33;UBERON:0002619!1.65e-21!22;UBERON:0000924!2.13e-19!173;UBERON:0006601!2.13e-19!173;UBERON:0004121!6.29e-19!169;UBERON:0000956!1.28e-18!25;UBERON:0000203!1.28e-18!25;UBERON:0003056!1.49e-18!61;UBERON:0001950!4.76e-17!20;UBERON:0000033!6.52e-14!123;UBERON:0000153!6.49e-13!129;UBERON:0007811!6.49e-13!129;UBERON:0000025!9.50e-12!194;UBERON:0000200!2.35e-11!6;UBERON:0003978!1.58e-10!3;UBERON:0009751!1.58e-10!3;UBERON:0000946!1.58e-10!3;UBERON:0002523!1.58e-10!3;UBERON:0005983!1.58e-10!3;UBERON:0002165!1.58e-10!3;UBERON:0002062!1.58e-10!3;UBERON:0007280!1.58e-10!3;UBERON:0000349!1.10e-09!5;UBERON:0001872!2.06e-09!5;UBERON:0002771!2.09e-09!3;UBERON:0001871!5.42e-09!7;UBERON:0003076!1.30e-08!15;UBERON:0003057!1.30e-08!15;UBERON:0004111!2.18e-08!241;UBERON:0004733!3.73e-08!12;UBERON:0002028!3.73e-08!12;UBERON:0007277!3.73e-08!12;UBERON:0002420!4.36e-08!9;UBERON:0007245!4.36e-08!9;UBERON:0010009!4.36e-08!9;UBERON:0010011!4.36e-08!9;UBERON:0000454!4.36e-08!9;UBERON:0002308!5.15e-08!9;UBERON:0000125!5.15e-08!9;UBERON:0002133!1.27e-07!2;UBERON:0004732!1.80e-07!13;UBERON:0002081!1.84e-07!2;UBERON:0001954!2.43e-07!2;UBERON:0003022!2.43e-07!2;UBERON:0002421!2.43e-07!2;UBERON:0002600!2.43e-07!2;UBERON:0000477!2.55e-07!286;UBERON:0000369!4.08e-07!4;UBERON:0002435!4.08e-07!4;UBERON:0000204!4.08e-07!4;UBERON:0010082!4.08e-07!4;UBERON:0009663!5.72e-07!7;UBERON:0001894!8.73e-07!7;UBERON:0006222!8.73e-07!7|ontology_enrichment_uberon_v019=UBERON:0003978;1.92e-66;3!UBERON:0000946;1.92e-66;3!UBERON:0002133;3.19e-45;2!UBERON:0007100;1.23e-31;25!UBERON:0002135;1.49e-23;1!UBERON:0002134;1.49e-23;1!UBERON:0005208;1.49e-23;1!UBERON:0004145;1.49e-23;1!UBERON:0005946;1.49e-23;1!UBERON:0005965;1.49e-23;1!UBERON:0002078;1.49e-23;1!UBERON:0002146;4.10e-23;1!UBERON:0005623;4.10e-23;1!UBERON:0010313;1.47e-20;10!UBERON:0000948;1.60e-16;22!UBERON:0002081;1.75e-12;2!UBERON:0001954;2.90e-12;2!UBERON:0003022;2.90e-12;2!UBERON:0002421;2.90e-12;2!UBERON:0002600;2.90e-12;2!UBERON:0004151;9.31e-09;3!UBERON:0003103;1.07e-08;61|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.41e-66,3;UBERON:0009751,2.41e-66,3;UBERON:0000946,2.41e-66,3;UBERON:0002523,2.41e-66,3;UBERON:0005983,2.41e-66,3;UBERON:0002165,2.41e-66,3;UBERON:0002062,2.41e-66,3;UBERON:0007280,2.41e-66,3;UBERON:0002133,3.19e-45,2;UBERON:0007100,2.81e-29,27;UBERON:0004797,5.64e-29,7;UBERON:0002134,1.07e-23,1;UBERON:0005208,1.07e-23,1;UBERON:0005946,1.07e-23,1;UBERON:0005965,1.07e-23,1;UBERON:0002078,1.07e-23,1;UBERON:0002135,2.10e-23,1;UBERON:0002146,5.13e-23,1;UBERON:0005623,5.13e-23,1;UBERON:0010313,1.57e-20,10;UBERON:0002342,1.57e-20,10;UBERON:0005062,1.57e-20,10;UBERON:0000948,3.55e-15,24;UBERON:0005498,3.55e-15,24;UBERON:0004140,3.55e-15,24;UBERON:0009881,3.55e-15,24;UBERON:0004141,3.55e-15,24;UBERON:0003084,3.55e-15,24;UBERON:0007005,3.55e-15,24;UBERON:0004139,3.55e-15,24;UBERON:0004291,3.55e-15,24;UBERON:0002081,1.48e-12,2;UBERON:0010227,1.48e-12,2;UBERON:0001954,2.90e-12,2;UBERON:0003022,2.90e-12,2;UBERON:0002421,2.90e-12,2;UBERON:0002600,2.90e-12,2;UBERON:0003103,1.11e-11,68;UBERON:0004151,8.31e-09,3;UBERON:0004145,8.31e-09,3;UBERON:0001009,4.57e-07,112;UBERON:0007023,6.47e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,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{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=not
|UniProt=NA
|association_with_transcript=NA
|coexpression_cluster_id=C3265
|description=CAGE_peak_at_chr1:237207955..237207959,+
|id=chr1:237207955..237207959,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0005062;4.36e-50;4!UBERON:0007284;4.36e-50;4!UBERON:0000358;1.49e-23;1!UBERON:0004140;1.49e-23;1!UBERON:0006603;4.16e-07;65!UBERON:0003104;6.03e-07;31
|ontology_enrichment_disease=DOID:114!3.19e-07!2
|ontology_enrichment_disease_v019=DOID:114;2.90e-12;2!DOID:1287;9.10e-07;4
|ontology_enrichment_disease_v019_2=DOID:114,2.59e-12,2;DOID:1287,8.61e-07,4
|ontology_enrichment_uberon=UBERON:0007023!3.23e-44!115;UBERON:0001049!5.34e-37!57;UBERON:0005068!5.34e-37!57;UBERON:0006241!5.34e-37!57;UBERON:0007135!5.34e-37!57;UBERON:0001017!5.04e-35!82;UBERON:0000073!5.38e-35!94;UBERON:0001016!5.38e-35!94;UBERON:0005743!5.53e-33!86;UBERON:0002616!7.99e-33!59;UBERON:0002780!2.19e-30!41;UBERON:0001890!2.19e-30!41;UBERON:0006240!2.19e-30!41;UBERON:0002346!4.34e-30!90;UBERON:0003075!6.48e-30!86;UBERON:0007284!6.48e-30!86;UBERON:0003080!1.57e-29!42;UBERON:0000955!1.73e-28!69;UBERON:0006238!1.73e-28!69;UBERON:0001869!7.98e-27!32;UBERON:0002020!3.41e-25!34;UBERON:0003528!3.41e-25!34;UBERON:0001893!5.39e-25!34;UBERON:0002791!3.10e-23!33;UBERON:0002619!1.65e-21!22;UBERON:0000924!2.13e-19!173;UBERON:0006601!2.13e-19!173;UBERON:0004121!6.29e-19!169;UBERON:0000956!1.28e-18!25;UBERON:0000203!1.28e-18!25;UBERON:0003056!1.49e-18!61;UBERON:0001950!4.76e-17!20;UBERON:0000033!6.52e-14!123;UBERON:0000153!6.49e-13!129;UBERON:0007811!6.49e-13!129;UBERON:0000025!9.50e-12!194;UBERON:0000200!2.35e-11!6;UBERON:0003978!1.58e-10!3;UBERON:0009751!1.58e-10!3;UBERON:0000946!1.58e-10!3;UBERON:0002523!1.58e-10!3;UBERON:0005983!1.58e-10!3;UBERON:0002165!1.58e-10!3;UBERON:0002062!1.58e-10!3;UBERON:0007280!1.58e-10!3;UBERON:0000349!1.10e-09!5;UBERON:0001872!2.06e-09!5;UBERON:0002771!2.09e-09!3;UBERON:0001871!5.42e-09!7;UBERON:0003076!1.30e-08!15;UBERON:0003057!1.30e-08!15;UBERON:0004111!2.18e-08!241;UBERON:0004733!3.73e-08!12;UBERON:0002028!3.73e-08!12;UBERON:0007277!3.73e-08!12;UBERON:0002420!4.36e-08!9;UBERON:0007245!4.36e-08!9;UBERON:0010009!4.36e-08!9;UBERON:0010011!4.36e-08!9;UBERON:0000454!4.36e-08!9;UBERON:0002308!5.15e-08!9;UBERON:0000125!5.15e-08!9;UBERON:0002133!1.27e-07!2;UBERON:0004732!1.80e-07!13;UBERON:0002081!1.84e-07!2;UBERON:0001954!2.43e-07!2;UBERON:0003022!2.43e-07!2;UBERON:0002421!2.43e-07!2;UBERON:0002600!2.43e-07!2;UBERON:0000477!2.55e-07!286;UBERON:0000369!4.08e-07!4;UBERON:0002435!4.08e-07!4;UBERON:0000204!4.08e-07!4;UBERON:0010082!4.08e-07!4;UBERON:0009663!5.72e-07!7;UBERON:0001894!8.73e-07!7;UBERON:0006222!8.73e-07!7
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|short_description=p@chr1:237207955..237207959,+
}}

Revision as of 00:57, 11 January 2014

Short description:p@chr1:237207955..237207959, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr1:237207955..237207959, +
Coexpression cluster:C3265_heart_umbilical_left_smooth_globus_Cardiac_neuroblastoma
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser

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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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