FFCP PHASE1:Hg19::chr10:104181300..104181349,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:104181300..104181349,+ | |||
|id=chr10:104181300..104181349,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.63e-11!254;CL:0002076!5.41e-10!43;CL:0000223!6.61e-10!59;CL:0002368!9.93e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.26e-14;13!CL:0002076;4.47e-11;42!CL:0002202;4.84e-10;9!CL:0002632;4.84e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.50e-15,42;CL:0002368,1.35e-14,13;CL:0000223,3.32e-14,58;CL:0000066,6.75e-11,253;CL:0002202,3.33e-10,9;CL:0002632,3.33e-10,9 | |||
|ontology_enrichment_development_v019=CL:0000223;3.97e-08;58 | |||
|ontology_enrichment_disease=DOID:305!3.66e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.89e-15!169;UBERON:0000925!2.89e-15!169;UBERON:0006595!2.89e-15!169;UBERON:0001007!2.71e-11!155;UBERON:0001555!2.71e-11!155;UBERON:0007026!2.71e-11!155;UBERON:0004921!6.37e-10!129;UBERON:0004185!6.37e-10!129;UBERON:0001004!5.84e-09!72;UBERON:0000077!6.81e-09!130;UBERON:0005911!1.21e-08!82;UBERON:0005153!1.19e-07!37;UBERON:0005178!2.69e-07!34;UBERON:0002224!2.69e-07!34;UBERON:0000065!4.71e-07!53;UBERON:0005177!5.70e-07!107;UBERON:0001041!6.29e-07!98;UBERON:0005181!9.23e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;6.19e-09;33!UBERON:0002365;1.18e-07;31!UBERON:0002330;1.18e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.96e-15,160;UBERON:0000925,1.96e-15,160;UBERON:0006595,1.96e-15,160;UBERON:0001007,2.12e-11,145;UBERON:0001555,2.12e-11,145;UBERON:0007026,2.12e-11,145;UBERON:0004921,2.62e-11,118;UBERON:0002530,1.17e-08,59;UBERON:0001041,6.72e-08,87;UBERON:0002365,1.01e-07,31;UBERON:0002330,1.01e-07,31;UBERON:0001004,1.83e-07,74;UBERON:0005177,7.65e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,7.6758128476967,0.873765488520689,1.58260186937072,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.136874425072884,0,0.229240217243854,0.328402357799783,0.0787107813136792,0.393364276848904,0.383829398097213,0.619264493264304,4.59710612239464,3.31326510656075,5.17655614233503,0,0,0,0,0.200544447470142,0.434021741431704,1.34349284543955,0.647787332037959,0.257575567634187,0,0,0.485168122375632,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0.419317291016752,0.22465726229299,0.150176892841506,0.32145117339416,0.570025487482497,0,0.365328307529268,0,0,0,0.426730222566507,1.60158394814405,0.574752439954483,1.32208974556972,0.954053754535364,1.1384259382189,0,0.382273228125229,0,0,0,0.590129310341499,0.393010762749165,1.23360899399706,2.50779743086017,3.58514493296949,6.62826928028627,1.94826728407911,1.44833593950726,1.76763544484902,2.21533894583621,0.270803863765016,1.28091319725675,1.95089021339817,0.493313713811028,1.10540007114339,2.02862160014537,2.07601188426885,2.1403266247177,0,0.906474741580529,3.06576394881537,1.03088233644789,0.506039384039006,1.59282707162048,1.95325036156926,0,2.10805166708882,1.79181255616186,1.24930726552346,1.65744076430812,0,1.20964045934839,0.534880391567015,0.724122019413995,0,0,0,0,0,0.289693037921647,0,0,0,0,0,1.0478326039817,3.64295288292542,7.04490441290416,0,0.348259474598534,0.26591592103773,0,0.571994910780128,0,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0.949265659568129,0,0,0,2.61656431285521,0,0.25326102332916,0.397227542439656,0,0,0,0,0,0,0,0.326923806226917,0.302714855289863,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0,1.18800285728205,0,0,0.718618141816238,0.168336113954066,0,0,0.438977620880838,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0.818238361772504,0.860413786167011,1.82960559194393,1.06023814657188,1.51052125730374,0.725627385107593,1.26160425437814,2.18986415445498,0,0,0,0,0,0.354920400119532,0,0,0.110293972732394,0,0.71181185733329,0.134831308160164,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0.590789906681404,0,1.8448265781467,0.171567810298526,1.53650399572076,0,0.804231779293047,2.40729957412177,0,1.03993478527958,0,0.115930404975077,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0.297262324577456,0.93733833986777,0.503946384596579,1.27597587518148,0.895585227028483,3.48760726216754,1.53353071666084,0,0.44024217006613,0.207328115540772,0.720599767084807,0.6312121671319,0.126995788584338,0.381988425558278,0,0,0.411309970813294,0,0.571652865261156,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0.791951872933429,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,0.788123040807709,0.431255149719035,0.77005821767849,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0.686286847621712,0.413536052245775,1.07857100409308,0.320182673410333,2.42502057157008,1.66435439510497,0.604780586659361,0,0.153461973288062,0.280660094433074,0,0,0.160853921143607,1.48418066444991,0.154209693802656,0.177561725313127,0,0,0.116210378459959,1.69203229428271,0.200506470303285,2.11786274552562,0.114814448164607,0,0.131124414959424,1.80479845162965,0.462092022626489,1.56869953835371,1.46139224653261,0.316654886678627,0,0,0,0,0.270946437543853,0,2.03901018436031,0,0.223874754722178,0,0,0,0,0,1.33953315142039,0,0.082509499920588,1.14853107599234,1.95018073810956,0,0.096670718292122,0.154048617114644,0,0,0,0.580066775656914,0.0852266274161009,0,2.64455864577565,2.49847087574638,1.65896526242959,2.2254711788221,0,0,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0.511795582622668,0.855877976067841,0,0,0.179872457583315,0.54907405947211,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0.655894752046633,0.202910376962704,0,0.563391205064483,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,2.21310859268678,5.3624182042863,5.44454924306613,2.44773882019626,0.43050537267123,3.36942951335251,4.87773168890343,2.29723400206959,0.507447609232169,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0.540031437238115,3.17250070517708,0.106824071127473,0,3.43056302373444,0,0,0,0,0,0,0.423347165447766,0.649243880549111,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0.201799707191048,0.425846237690326,0,0,0,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0,0,2.99424864653152,0.293016358543788,0.36408156524854,0.334330152832435,0.284136146806413,1.67121139316383,0.890894042497916,2.15012491469462,0,0.562677665642051,0.111308705022906,1.15362711958732,0.422250816255987,0.398495976502139,0.552567831062295,1.5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| |||
|short_description=p@chr10:104181300..104181349,+ | |||
}} |
Revision as of 04:42, 11 January 2014
Short description: | p@chr10:104181300..104181349, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104181300..104181349, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.50e-15 | 42 |
respiratory epithelial cell | 1.35e-14 | 13 |
endodermal cell | 3.32e-14 | 58 |
epithelial cell | 6.75e-11 | 253 |
epithelial cell of tracheobronchial tree | 3.33e-10 | 9 |
epithelial cell of lower respiratory tract | 3.33e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.96e-15 | 160 |
endoderm | 1.96e-15 | 160 |
presumptive endoderm | 1.96e-15 | 160 |
digestive system | 2.12e-11 | 145 |
digestive tract | 2.12e-11 | 145 |
primitive gut | 2.12e-11 | 145 |
subdivision of digestive tract | 2.62e-11 | 118 |
gland | 1.17e-08 | 59 |
foregut | 6.72e-08 | 87 |
exocrine gland | 1.01e-07 | 31 |
exocrine system | 1.01e-07 | 31 |
respiratory system | 1.83e-07 | 74 |
trunk region element | 7.65e-07 | 101 |