FFCP PHASE1:Hg19::chr12:54332652..54332671,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3229 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5125 | |||
|TSSclassifier=strong | |||
|UniProt=P31276 | |||
|association_with_transcript=76bp_to_NM_017410,uc001sei.2,uc010sop.1_5end | |||
|coexpression_cluster_id=C2216 | |||
|description=CAGE_peak_2_at_HOXC13_5end | |||
|id=chr12:54332652..54332671,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.10e-21!254;CL:0000076!1.14e-15!62;CL:0000077!1.31e-08!19;CL:0002327!4.39e-08!4;CL:0002150!5.84e-07!3;CL:0000861!5.84e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000515;3.21e-11;3!CL:0002327;4.60e-09;4!CL:0000056;1.58e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.30e-14,253;CL:0000076,1.43e-09,63;CL:0002327,3.60e-09,4;CL:0000515,1.59e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.58e-08;4!UBERON:0008947;1.63e-08;29 | |||
|ontology_enrichment_disease=DOID:0050687!1.85e-40!143;DOID:162!1.18e-34!235;DOID:14566!1.97e-33!239;DOID:305!2.53e-31!106;DOID:1749!3.37e-19!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.07e-12;14!DOID:305;1.42e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.01e-21,106;DOID:0050687,3.29e-21,143;DOID:162,8.22e-18,235;DOID:14566,3.07e-17,239;DOID:1749,5.13e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.94e-16!9;UBERON:0001557!3.14e-08!19;UBERON:0001911!4.39e-08!4;UBERON:0005333!4.39e-08!4;UBERON:0008425!4.39e-08!4;UBERON:0005311!4.39e-08!4;UBERON:0003343!6.74e-08!4;UBERON:0004785!6.74e-08!4;UBERON:0008947!1.18e-07!38;UBERON:0003258!1.18e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.02e-31;9!UBERON:0001557;4.02e-31;9!UBERON:0001911;4.60e-09;4!UBERON:0003343;4.60e-09;4!UBERON:0004785;4.60e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.44e-31,9;UBERON:0001557,3.16e-17,19;UBERON:0001911,3.60e-09,4;UBERON:0005333,3.60e-09,4;UBERON:0008425,3.60e-09,4;UBERON:0005311,3.60e-09,4;UBERON:0003343,4.24e-09,4;UBERON:0004785,4.24e-09,4 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36613600079688,2.86593973132773,5.06123162755312,4.52205288202815,1.96091499683166,2.84724742933316,1.21348177344148,1.37355025587742,1.15424147083917,0,0,0,0,0,0,0,0,0.860919069801795,0,2.08525542276389,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88072897675981,0.581267877027924,4.21720947081732,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59259437334337,1.64381058040307,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0.511707249066704,0,0,0,0,0,0,0,1.69203229428271,0.601519410909855,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.95018073810956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,12.1779441085319,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,7.38938928447977,0,0,0.251932747854276,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,1.82299432759663,7.95885999965381,0,0.796554137998498,0,0.472775363535873,0.344743373241465,0,0,0,0,0,0,0,0,0.762569244632931,19.2404767104473,0,0,0,0.718061155278177,0.54323685961004,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,2.16388639742091,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0.60129367765797,3.5253985075064,0,0,0,0,0,0.416024019039416,0,2.25382514053069,0.261177619741208,0,0,5.12808555832151,7.23584239153237,3.94154193855404,0,0.176512253383001,0,0,0,0,4.69323318563527,0,0,8.39200360244947,1.58499458869517,0.687219576995494,0,0,0.248505071130865,1.17847017308398,0.543616824294456,0.941425616810999,5.71190018763402,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,17.1071690675626,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,5.07223600137888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0.192619830407303,0.214441591374926,0.260994291965212,4.76082443575772,3.00979216620984,0.489473409012935,1.96997725189636,0.617602894321944,1.97355644620836,0,0,0,0,1.0362910251936,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0.622077260032973,0,0,0,0,0.678930119816101,1.2754495206101,1.85903646388503,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76665893301846,0.353909170043221,7.52057253938884,4.15892398141218,0,0,1.5913297769302,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0.444925607568277,0,0,0.280272163313789,0,0,0,0,0,1.85986280589,2.60787408453869,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0.111855431797792,0,0,0,0,0,2.4285549652957,0,0.795803100645473,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,1.60698544745092,0,0.722172300202514,0,0,0,14.1994405973866,0,0,0,0,0,0,0,0,0,0.101988829741982,0,1.01084389488329,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@HOXC13 | |||
}} |
Revision as of 13:46, 11 January 2014
Short description: | p2@HOXC13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXC13_5end |
Coexpression cluster: | C2216_keratoacanthoma_cervical_synovial_Wilms_gastric_oral_mesothelioma |
Association with transcript: | 76bp_to_NM_017410, uc001sei.2, uc010sop.1_5end |
EntrezGene: | HOXC13 |
HGNC: | 5125 |
UniProt: | P31276 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.30e-14 | 253 |
squamous epithelial cell | 1.43e-09 | 63 |
mammary gland epithelial cell | 3.60e-09 | 4 |
skeletal muscle myoblast | 1.59e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.44e-31 | 9 |
upper respiratory tract | 3.16e-17 | 19 |
mammary gland | 3.60e-09 | 4 |
mammary bud | 3.60e-09 | 4 |
mammary ridge | 3.60e-09 | 4 |
mammary placode | 3.60e-09 | 4 |
mucosa of oral region | 4.24e-09 | 4 |
respiratory system mucosa | 4.24e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.01e-21 | 106 |
cell type cancer | 3.29e-21 | 143 |
cancer | 8.22e-18 | 235 |
disease of cellular proliferation | 3.07e-17 | 239 |
squamous cell carcinoma | 5.13e-12 | 14 |