FFCP PHASE1:Hg19::chr12:97306295..97306304,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121441 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7723 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NHV4 | |||
|association_with_transcript=-49bp_to_ENST00000457368,uc001tex.2_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_4_at_NEDD1_5end | |||
|id=chr12:97306295..97306304,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008814;4.32e-26;2!UBERON:0010056;4.32e-26;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001630!1.13e-19!2;UBERON:0005090!1.13e-19!2;UBERON:0001723!1.60e-13!3;UBERON:0001033!1.60e-13!3;UBERON:0010056!1.60e-13!3;UBERON:0002426!8.14e-11!1;UBERON:0003831!8.14e-11!1;UBERON:0003898!8.14e-11!1;UBERON:0004830!8.14e-11!1;UBERON:0001774!8.14e-11!1;UBERON:0003830!8.14e-11!1;UBERON:0005175!8.14e-11!1;UBERON:0003897!8.14e-11!1;UBERON:0001103!8.14e-11!1;UBERON:0010084!8.14e-11!1;UBERON:0000989!9.84e-11!1;UBERON:0008811!9.84e-11!1;UBERON:0006258!9.84e-11!1;UBERON:0005876!9.84e-11!1;UBERON:0004874!9.84e-11!1;UBERON:0007029!1.08e-10!1;UBERON:0005418!1.30e-10!1;UBERON:0001389!1.30e-10!1;UBERON:0000026!1.30e-10!1;UBERON:0008784!1.30e-10!1;UBERON:0006058!1.30e-10!1;UBERON:0003663!1.30e-10!1;UBERON:0001383!1.30e-10!1;UBERON:0004256!1.30e-10!1;UBERON:0002529!1.30e-10!1;UBERON:0004708!1.30e-10!1;UBERON:0002101!1.30e-10!1;UBERON:0004709!1.30e-10!1;UBERON:0003661!1.30e-10!1;UBERON:0002471!1.30e-10!1;UBERON:0004357!1.30e-10!1;UBERON:0009872!1.30e-10!1;UBERON:0004347!1.30e-10!1;UBERON:0005420!1.30e-10!1;UBERON:0005732!1.30e-10!1;UBERON:0006057!1.30e-10!1;UBERON:0000978!1.30e-10!1;UBERON:0002103!1.30e-10!1;UBERON:0001665!1.30e-10!1;UBERON:0003823!1.30e-10!1;UBERON:0000154!1.30e-10!1;UBERON:0005733!1.30e-10!1;UBERON:0005730!1.30e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;3.99e-50;1!UBERON:0003831;3.99e-50;1!UBERON:0003898;3.99e-50;1!UBERON:0004830;3.99e-50;1!UBERON:0003830;3.99e-50;1!UBERON:0005175;3.99e-50;1!UBERON:0001774;3.99e-50;1!UBERON:0001103;3.99e-50;1!UBERON:0005090;7.14e-26;2!UBERON:0001630;7.14e-26;2!UBERON:0000341;9.18e-26;2!UBERON:0001723;6.76e-18;3!UBERON:0001033;6.76e-18;3!UBERON:0001134;1.95e-13;16!UBERON:0002036;1.95e-13;16!UBERON:0000974;1.57e-09;6!UBERON:0002385;1.17e-07;31!UBERON:0001015;1.17e-07;31!UBERON:0000383;1.17e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,3.99e-50,1;UBERON:0003831,3.99e-50,1;UBERON:0003898,3.99e-50,1;UBERON:0004830,3.99e-50,1;UBERON:0003830,3.99e-50,1;UBERON:0005175,3.99e-50,1;UBERON:0001774,3.99e-50,1;UBERON:0001103,3.99e-50,1;UBERON:0010084,3.99e-50,1;UBERON:0005090,7.14e-26,2;UBERON:0001630,7.14e-26,2;UBERON:0000341,9.18e-26,2;UBERON:0001723,6.76e-18,3;UBERON:0001033,6.76e-18,3;UBERON:0010056,6.76e-18,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,3.2852098193999,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70587185520785,0,0,0,0,0,0.404234377916439,4.35433495793923,0.684466602170562,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p4@NEDD1 | |||
}} |
Revision as of 15:22, 11 January 2014
Short description: | p4@NEDD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NEDD1_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -49bp_to_ENST00000457368, uc001tex.2_5end |
EntrezGene: | NEDD1 |
HGNC: | 7723 |
UniProt: | Q8NHV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chest muscle | 3.99e-50 | 1 |
respiratory system muscle | 3.99e-50 | 1 |
skeletal muscle of trunk | 3.99e-50 | 1 |
respiratory system skeletal muscle | 3.99e-50 | 1 |
thoracic segment muscle | 3.99e-50 | 1 |
chest organ | 3.99e-50 | 1 |
muscle of trunk | 3.99e-50 | 1 |
diaphragm | 3.99e-50 | 1 |
future diaphragm | 3.99e-50 | 1 |
muscle structure | 7.14e-26 | 2 |
muscle organ | 7.14e-26 | 2 |
throat | 9.18e-26 | 2 |
tongue | 6.76e-18 | 3 |
gustatory system | 6.76e-18 | 3 |
future tongue | 6.76e-18 | 3 |