FFCP PHASE1:Hg19::chr13:113812939..113812950,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8858 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9460 | |||
|TSSclassifier=strong | |||
|UniProt=P22891 | |||
|association_with_transcript=-17bp_to_ENST00000342783,ENST00000375547,NM_003891,uc001vta.1,uc010agr.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_PROZ_5end | |||
|id=chr13:113812939..113812950,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.85e-33!12;CL:0000417!4.85e-33!12;CL:0000668!4.85e-33!12;CL:0000414!4.85e-33!12;CL:0000412!4.85e-33!12;CL:0000182!4.85e-33!12;CL:0000223!1.38e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.08e-15;12!CL:0000047;4.09e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.11e-15,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.87e-08;11!UBERON:0009497;3.94e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.41e-37!19;UBERON:0006925!8.41e-37!19;UBERON:0008836!8.41e-37!19;UBERON:0008835!1.10e-31!22;UBERON:0003894!1.10e-31!22;UBERON:0009854!2.84e-30!23;UBERON:0007499!8.62e-28!25;UBERON:0009497!8.62e-28!25;UBERON:0000015!8.62e-28!25;UBERON:0002423!8.62e-28!25;UBERON:0006235!8.62e-28!25;UBERON:0004161!8.62e-28!25;UBERON:0005057!1.08e-26!26;UBERON:0009856!1.08e-26!26;UBERON:0002368!1.13e-24!35;UBERON:0002365!2.93e-22!31;UBERON:0002330!2.93e-22!31;UBERON:0003929!2.98e-19!54;UBERON:0005172!5.66e-19!55;UBERON:0005173!5.66e-19!55;UBERON:0000949!5.85e-19!45;UBERON:0002417!5.56e-17!61;UBERON:0000916!5.56e-17!61;UBERON:0002530!3.33e-14!59;UBERON:0005911!3.11e-12!82;UBERON:0005177!4.17e-09!107;UBERON:0004921!8.27e-09!129;UBERON:0004185!8.27e-09!129;UBERON:0009569!1.50e-08!113;UBERON:0001007!1.62e-08!155;UBERON:0001555!1.62e-08!155;UBERON:0007026!1.62e-08!155;UBERON:0004119!1.14e-07!169;UBERON:0000925!1.14e-07!169;UBERON:0006595!1.14e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.88e-26;19!UBERON:0006925;1.88e-26;19!UBERON:0002423;3.62e-20;25!UBERON:0002365;2.89e-16;31!UBERON:0002330;2.89e-16;31!UBERON:0002368;4.27e-14;33!UBERON:0005172;1.14e-10;52!UBERON:0005173;1.14e-10;52!UBERON:0000949;2.85e-10;43!UBERON:0002417;6.49e-07;58!UBERON:0000916;6.49e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.88e-26,19;UBERON:0006925,1.88e-26,19;UBERON:0008836,1.88e-26,19;UBERON:0008835,6.97e-23,22;UBERON:0003894,6.97e-23,22;UBERON:0009854,6.71e-22,23;UBERON:0007499,3.62e-20,25;UBERON:0009497,3.62e-20,25;UBERON:0000015,3.62e-20,25;UBERON:0002423,3.62e-20,25;UBERON:0006235,3.62e-20,25;UBERON:0004161,3.62e-20,25;UBERON:0009856,2.11e-19,26;UBERON:0002365,2.63e-16,31;UBERON:0002330,2.63e-16,31;UBERON:0002368,1.83e-14,35;UBERON:0005172,2.92e-13,54;UBERON:0005173,2.92e-13,54;UBERON:0002417,6.28e-12,60;UBERON:0000916,6.28e-12,60;UBERON:0000949,2.79e-11,45;UBERON:0003929,2.04e-09,54;UBERON:0002530,1.26e-08,59;UBERON:0005177,4.97e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0132552232746,8.84544495009863,10.0434284135839,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.59462474545423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06078505825844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945398187686684,0.906574442192831,0.606631894687664,0,0,0,0,0,0,0,0,0,0,0,1.49730843868477,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2586563574658,14.5757577803443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@PROZ | |||
}} |
Revision as of 18:47, 11 January 2014
Short description: | p2@PROZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PROZ_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -17bp_to_ENST00000342783, ENST00000375547, NM_003891, uc001vta.1, uc010agr.1_5end |
EntrezGene: | PROZ |
HGNC: | 9460 |
UniProt: | P22891 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.11e-15 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.88e-26 | 19 |
digestive gland | 1.88e-26 | 19 |
liver bud | 1.88e-26 | 19 |
hepatic diverticulum | 6.97e-23 | 22 |
liver primordium | 6.97e-23 | 22 |
digestive tract diverticulum | 6.71e-22 | 23 |
epithelial sac | 3.62e-20 | 25 |
epithelium of foregut-midgut junction | 3.62e-20 | 25 |
anatomical boundary | 3.62e-20 | 25 |
hepatobiliary system | 3.62e-20 | 25 |
foregut-midgut junction | 3.62e-20 | 25 |
septum transversum | 3.62e-20 | 25 |
sac | 2.11e-19 | 26 |
exocrine gland | 2.63e-16 | 31 |
exocrine system | 2.63e-16 | 31 |
endocrine gland | 1.83e-14 | 35 |
abdomen element | 2.92e-13 | 54 |
abdominal segment element | 2.92e-13 | 54 |
abdominal segment of trunk | 6.28e-12 | 60 |
abdomen | 6.28e-12 | 60 |
endocrine system | 2.79e-11 | 45 |
gut epithelium | 2.04e-09 | 54 |
gland | 1.26e-08 | 59 |
trunk region element | 4.97e-07 | 101 |