FFCP PHASE1:Hg19::chr16:10674475..10674494,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2013 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3334 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000342147_5end | |||
|description=CAGE_peak_4_at_EMP2_5end | |||
|id=chr16:10674475..10674494,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.06e-08;29!UBERON:0006595;1.96e-07;86 | |||
|ontology_enrichment_disease=DOID:305!3.19e-10!106;DOID:0050687!1.25e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.41e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.15e-13!169;UBERON:0000925!2.15e-13!169;UBERON:0006595!2.15e-13!169;UBERON:0001007!2.29e-11!155;UBERON:0001555!2.29e-11!155;UBERON:0007026!2.29e-11!155;UBERON:0000468!2.36e-11!659;UBERON:0000481!9.93e-11!347;UBERON:0000077!4.36e-10!130;UBERON:0000064!8.67e-10!219;UBERON:0007023!9.08e-10!115;UBERON:0000467!2.42e-09!625;UBERON:0000480!3.84e-09!626;UBERON:0000062!5.85e-09!511;UBERON:0004921!8.02e-09!129;UBERON:0004185!8.02e-09!129;UBERON:0000475!3.66e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.05e-07;9!UBERON:0001557;3.05e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.97e-13,160;UBERON:0000925,5.97e-13,160;UBERON:0006595,5.97e-13,160;UBERON:0001007,2.31e-11,145;UBERON:0001555,2.31e-11,145;UBERON:0007026,2.31e-11,145;UBERON:0007023,3.60e-09,114;UBERON:0004921,3.99e-09,118;UBERON:0001737,2.56e-07,9 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,0,0,0,0,0,0.522371256399677,1.22866968250754,1.39560233594486,5.02415155899396,2.11013582582763,0.618831764800233,0,0,0,0,0.487932798790507,0.246242116153576,0.408001382488506,2.19418305034661,0,0.684372125364421,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895661896959697,0.32389366601898,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.767175371061182,0,1.50401373190767,1.88300474649071,0.795285947051099,7.29952305453954,0.283604451492204,0.665188192387692,0.614843499851882,2.75056058545197,1.09288586487763,1.48313777113772,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0.208994966536811,0.775250277507987,0,0.66944122552934,0,0,0.976248230192678,0,1.62028389576352,0.625098097988558,1.79623498100936,1.80178368773316,0,0,0,0,0,0.872188104285069,0.496971951695318,0.506522046658319,0.132409180813219,0.286836620748814,1.06400514659507,0.560677600142307,0,0.98667019366864,0.311211035399766,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0.312160076830321,3.99330275081114,1.49448680551801,0.469737994575059,0.323745888736263,0.421352420106746,1.02077085627447,2.33385202892359,1.75653827998801,0,0.989067717114227,0,0.718618141816238,0.673344455816265,2.75260743718321,0,2.19488810440419,1.83892677479412,1.80285670687916,0.567160915800105,0.179389635688862,2.77624605464138,1.05965950579781,0.600182192168805,0.412210116953756,0.257640540045629,0.744467425326359,3.20675031258406,0.194874010322397,0.504867548488229,2.20919756741518,0.323292113637624,0.710019185033229,0,1.3564847384839,0.193260853163297,0.272746120590835,0.286804595389004,0.365921118388786,0.530119073285941,0.348581828608555,0.621966330092223,0.252320850875628,1.09493207722749,1.56449532329816,2.57296375277154,1.38134921352481,1.39310378409594,5.0531563716871,4.96888560167344,5.39471008249925,2.6511213287183,5.4044046638873,3.4860711054785,3.32178866755535,3.7752766284846,3.53198637225623,1.53898862778556,0,0,0.8231480226628,0,0,0.982827216677626,0,0,3.68965315629341,0.171567810298526,1.09750285408626,0,1.40740561376283,1.20364978706088,0,0,0,0.231860809950154,0.352226082707465,0.866198686566443,1.85194205030644,1.90254152234598,6.3216351836742,9.4433477830436,0,0,0.148631162288728,0,0.671928512795438,0.283550194484773,0.53735113621709,1.45316969256981,1.53353071666084,0,0,0,0.144119953416961,0.12624243342638,0.63497894292169,0.381988425558278,0,1.71072446022705,1.13110241973656,2.10240140490742,1.14330573052231,0,0.43596006883328,1.466765716419,0.387815147273333,0,5.917119267892,0.26593811658487,0,2.82928111688356,4.25547396069835,2.39779961114489,1.14382394926518,0,0,2.28015329005615,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,1.14861935834114,11.4109524032575,0.579125226670317,2.87666851570537,0.895304816199478,0.112085143993527,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.335032530668698,1.27587750330633,0,0,0,2.4538298343828,6.00204625271613,0,0.415941723061614,0.535286966391485,0.315404830067869,0.35142424497814,1.20378439891088,0,3.10419213877515,2.65690239414175,2.39679919104214,1.47702144595741,0.391602314925481,0,0,0,0,1.81876542867756,6.65741758041988,5.74541557326393,0.248107807818777,0.460385919864187,0,0.512556597022804,0.511707249066704,0,0,2.00472601943452,1.24293207719189,1.72467027628999,2.07701771673448,0.348631135379878,7.25156697549733,0.40101294060657,2.20994373446151,0.574072240823034,0,0.786746489756545,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,1.02580050046556,4.92021968549559,4.88067591996455,5.66725564062472,1.19040304263846,0.990113999047056,0.574265537996172,1.30012049207304,0,0.676695028044854,0,0.614014698904518,0.689182862422653,0.966782203814463,2.46528379654188,2.13066568540252,1.4245125703478,0,0.384380134730212,1.91419068741876,1.31505115112215,0,0.62962469366128,0,0.308033580176089,0.532306030317022,0.869932992075073,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0.767693373934002,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0.353437207037059,0,1.58510321173008,0.842516912477962,0,0.243713489631284,0,0,0.141405431953713,0,1.65409603063837,0.66343897524122,0,0,3.9353685122798,0.405820753925408,0.30982349809975,0.281695602532241,0.430234056612155,0.392996164052485,0.7133421029625,0.354761064070598,2.74439925886963,0.329294892959902,0.379473173765715,0.699869440489966,0.384888450902048,2.68120910214315,0,4.0481834334015,0.43050537267123,1.68471475667626,1.7737206141467,0.459446800413919,0,0,0,0,0,0,0,0,0.427296284509893,0,4.41072388765857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0.333698283423817,0.586164286206121,0,0,0,0,0,9.16988648000277,3.66270448179735,0.849523652246594,3.67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| |||
|short_description=p4@EMP2 | |||
}} |
Revision as of 02:18, 12 January 2014
Short description: | p4@EMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EMP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000342147_5end |
EntrezGene: | EMP2 |
HGNC: | 3334 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.97e-13 | 160 |
endoderm | 5.97e-13 | 160 |
presumptive endoderm | 5.97e-13 | 160 |
digestive system | 2.31e-11 | 145 |
digestive tract | 2.31e-11 | 145 |
primitive gut | 2.31e-11 | 145 |
adult organism | 3.60e-09 | 114 |
subdivision of digestive tract | 3.99e-09 | 118 |
larynx | 2.56e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.41e-08 | 106 |