FFCP PHASE1:Hg19::chr16:55855387..55855408,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:55855387..55855408,- | |||
|id=chr16:55855387..55855408,- | |||
|ontology_enrichment_celltype=CL:0002057!3.16e-17!42;CL:0000860!8.09e-16!45;CL:0000181!5.47e-14!12;CL:0000417!5.47e-14!12;CL:0000668!5.47e-14!12;CL:0000414!5.47e-14!12;CL:0000412!5.47e-14!12;CL:0000182!5.47e-14!12;CL:0002194!4.51e-13!63;CL:0000576!4.51e-13!63;CL:0000040!4.51e-13!63;CL:0000559!4.51e-13!63;CL:0002009!1.52e-12!65;CL:0000766!1.91e-11!76;CL:0000839!2.33e-11!70;CL:0000557!3.83e-11!71;CL:0000763!2.77e-09!112;CL:0000049!2.77e-09!112;CL:0000136!5.72e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.88e-21;1!CL:0000182;1.57e-15;12!CL:0000159;2.02e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.88e-21,1;CL:0000182,1.65e-15,12;CL:0000159,2.02e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.09e-17;11!UBERON:0009497;2.17e-14;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;1.88e-21;1!DOID:5662;5.16e-21;1!DOID:171;5.80e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.88e-21,1;DOID:5662,7.72e-21,1;DOID:171,5.15e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002405!4.27e-15!115;UBERON:0002107!4.97e-11!19;UBERON:0006925!4.97e-11!19;UBERON:0008836!4.97e-11!19;UBERON:0009497!3.79e-10!25;UBERON:0000015!3.79e-10!25;UBERON:0002423!3.79e-10!25;UBERON:0006235!3.79e-10!25;UBERON:0004161!3.79e-10!25;UBERON:0005057!1.53e-09!26;UBERON:0002371!1.93e-09!80;UBERON:0008835!2.48e-09!22;UBERON:0003894!2.48e-09!22;UBERON:0009854!7.26e-09!23;UBERON:0001474!1.66e-08!86;UBERON:0002390!2.08e-08!102;UBERON:0003061!2.08e-08!102;UBERON:0003929!3.97e-08!54;UBERON:0007499!4.81e-08!25;UBERON:0009856!1.11e-07!26;UBERON:0002193!2.85e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.83e-17;19!UBERON:0006925;4.83e-17;19!UBERON:0002423;4.71e-13;25!UBERON:0002365;6.10e-11;31!UBERON:0002330;6.10e-11;31!UBERON:0002368;9.37e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.71e-17,19;UBERON:0006925,5.71e-17,19;UBERON:0008836,5.71e-17,19;UBERON:0008835,1.03e-14,22;UBERON:0003894,1.03e-14,22;UBERON:0009854,4.29e-14,23;UBERON:0007499,5.34e-13,25;UBERON:0009497,5.34e-13,25;UBERON:0000015,5.34e-13,25;UBERON:0002423,5.34e-13,25;UBERON:0006235,5.34e-13,25;UBERON:0004161,5.34e-13,25;UBERON:0009856,1.63e-12,26;UBERON:0002365,1.48e-10,31;UBERON:0002330,1.48e-10,31;UBERON:0002368,2.18e-09,35;UBERON:0000949,2.28e-07,45 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.697287110717054,0.822335776043652,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0.818718450173537,0,0.918251677112708,0.320929027076094,0,0,0,0,1.45104619314292,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80719882876419,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412079291905832,0.13480708770837,2.75596948241297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,1.02586563574658,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,1.22538230705385,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.14432271884298,0,0,0.320075189082423,0,0,0,0,0,0,0,7.07696738351534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75871244359621,0,0,0,0,0,0,0,1.20041606606193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr16:55855387..55855408,- | |||
}} |
Revision as of 03:40, 12 January 2014
Short description: | p@chr16:55855387..55855408, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:55855387..55855408, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.88e-21 | 1 |
hepatocyte | 1.65e-15 | 12 |
seromucus secreting cell | 2.02e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 5.71e-17 | 19 |
digestive gland | 5.71e-17 | 19 |
liver bud | 5.71e-17 | 19 |
hepatic diverticulum | 1.03e-14 | 22 |
liver primordium | 1.03e-14 | 22 |
digestive tract diverticulum | 4.29e-14 | 23 |
epithelial sac | 5.34e-13 | 25 |
epithelium of foregut-midgut junction | 5.34e-13 | 25 |
anatomical boundary | 5.34e-13 | 25 |
hepatobiliary system | 5.34e-13 | 25 |
foregut-midgut junction | 5.34e-13 | 25 |
septum transversum | 5.34e-13 | 25 |
sac | 1.63e-12 | 26 |
exocrine gland | 1.48e-10 | 31 |
exocrine system | 1.48e-10 | 31 |
endocrine gland | 2.18e-09 | 35 |
endocrine system | 2.28e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.88e-21 | 1 |
pleomorphic carcinoma | 7.72e-21 | 1 |
neuroectodermal tumor | 5.15e-09 | 10 |