FFCP PHASE1:Hg19::chr17:66096368..66096375,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr17:66096368..66096375,+ | |||
|id=chr17:66096368..66096375,+ | |||
|ontology_enrichment_celltype=CL:0000817!9.57e-09!3;CL:0000838!4.77e-08!52;CL:0000542!7.88e-08!53;CL:0000051!7.88e-08!53;CL:0002150!1.24e-07!3;CL:0000861!1.24e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.56e-15;1!CL:0000911;2.56e-15;1!CL:0000814;2.56e-15;1!CL:0000182;3.60e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.78e-15,1;CL:0000914,1.78e-15,1;CL:0000911,1.78e-15,1;CL:0000814,1.78e-15,1;CL:0002042,1.78e-15,1;CL:0002039,1.78e-15,1;CL:0002040,1.78e-15,1;CL:0002041,1.78e-15,1;CL:0000182,3.60e-11,12;CL:0000893,2.15e-08,2;CL:0002489,2.15e-08,2;CL:0000809,2.15e-08,2;CL:0000808,2.15e-08,2;CL:0000894,2.15e-08,2;CL:0000806,2.15e-08,2;CL:0000807,2.15e-08,2;CL:0000805,2.15e-08,2;CL:0002425,2.15e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.94e-12;11!UBERON:0009497;2.35e-10;13!CL:0002425;2.57e-08;2!UBERON:0001041;7.70e-08;30!UBERON:0003104;1.50e-07;31 | |||
|ontology_enrichment_disease=DOID:162!3.14e-25!235;DOID:14566!2.13e-24!239;DOID:305!3.90e-16!106;DOID:0050686!4.69e-15!137;DOID:0050687!1.06e-14!143;DOID:2531!4.71e-14!51;DOID:0060083!4.71e-14!51;DOID:0060058!3.03e-12!10;DOID:3905!5.35e-10!9;DOID:1036!4.01e-08!8;DOID:1324!1.77e-07!15;DOID:1240!2.62e-07!39;DOID:0050615!6.02e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.39e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.39e-08,2;DOID:2531,7.37e-07,51;DOID:0060083,7.37e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.39e-08;2!UBERON:0002173;1.39e-08;2!UBERON:0002186;1.39e-08;2!UBERON:0000473;3.38e-08;8!UBERON:0002107;2.95e-07;19!UBERON:0006925;2.95e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007499,2.31e-09,25;UBERON:0009856,5.19e-09,26;UBERON:0004903,1.39e-08,2;UBERON:0002173,1.39e-08,2;UBERON:0002186,1.39e-08,2;UBERON:0000473,3.38e-08,8;UBERON:0002107,2.95e-07,19;UBERON:0006925,2.95e-07,19;UBERON:0008836,2.95e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.309868802321207,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,3.27447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.882926198829301,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79336230389644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,1.06712765022621,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,1.03051603426729,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,11.1871606128817,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0,0,2.04386596391473,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0.317873157960757,0,0,0.848118428603645,0,0,0,0,2.96521128680622,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,56.5216056998492,0.622129148383483,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0.343189995723929,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,1.10296455230113,1.15382201733633,2.29172049104229,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0.528001682597033,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46151118057075,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0.316027223465453,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0.22589216407792,0.109940516745429,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.504665699340316,0.218531143927391,0.126698501011437,0.101988829741982,0,0,0.50141507858475,8.79032899331577,16.3458119395269,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:66096368..66096375,+ | |||
}} |
Revision as of 16:57, 20 January 2014
Short description: | p@chr17:66096368..66096375, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:66096368..66096375, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.78e-15 | 1 |
immature NK T cell | 1.78e-15 | 1 |
effector T cell | 1.78e-15 | 1 |
mature NK T cell | 1.78e-15 | 1 |
immature NK T cell stage IV | 1.78e-15 | 1 |
immature NK T cell stage I | 1.78e-15 | 1 |
immature NK T cell stage II | 1.78e-15 | 1 |
immature NK T cell stage III | 1.78e-15 | 1 |
hepatocyte | 3.60e-11 | 12 |
thymocyte | 2.15e-08 | 2 |
double negative thymocyte | 2.15e-08 | 2 |
double-positive, alpha-beta thymocyte | 2.15e-08 | 2 |
DN4 thymocyte | 2.15e-08 | 2 |
DN1 thymic pro-T cell | 2.15e-08 | 2 |
DN2 thymocyte | 2.15e-08 | 2 |
DN3 thymocyte | 2.15e-08 | 2 |
immature single positive thymocyte | 2.15e-08 | 2 |
early T lineage precursor | 2.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelial sac | 2.31e-09 | 25 |
sac | 5.19e-09 | 26 |
bronchoalveolar duct junction | 1.39e-08 | 2 |
alveolar duct | 1.39e-08 | 2 |
bronchiole | 1.39e-08 | 2 |
testis | 3.38e-08 | 8 |
liver | 2.95e-07 | 19 |
digestive gland | 2.95e-07 | 19 |
liver bud | 2.95e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.39e-08 | 2 |
hematologic cancer | 7.37e-07 | 51 |
immune system cancer | 7.37e-07 | 51 |