FFCP PHASE1:Hg19::chr17:74581892..74581957,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10610 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10867 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UJ37 | |||
|association_with_transcript=187bp_to_ENST00000225276,NM_006456,uc002jsg.3_5end | |||
|description=CAGE_peak_1_at_ST6GALNAC2_5end | |||
|id=chr17:74581892..74581957,- | |||
|ontology_enrichment_celltype=CL:0000766!7.59e-14!76;CL:0002009!1.68e-11!65;CL:0002194!3.77e-11!63;CL:0000576!3.77e-11!63;CL:0000040!3.77e-11!63;CL:0000559!3.77e-11!63;CL:0000557!6.51e-11!71;CL:0000839!4.62e-10!70;CL:0002057!8.28e-10!42;CL:0000860!2.12e-09!45;CL:0002077!3.35e-08!33;CL:0002076!4.63e-08!43;CL:0002368!7.16e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.32e-09;42!CL:0000860;4.96e-09;33!CL:0002057;4.96e-09;33!CL:0000473;1.20e-08;39!CL:0000234;1.20e-08;39!CL:0002368;1.95e-08;13!CL:0000576;2.01e-07;48!CL:0000766;3.41e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.59e-15,72;CL:0000473,5.27e-12,48;CL:0000234,5.27e-12,48;CL:0002076,8.26e-12,42;CL:0002009,1.35e-11,61;CL:0002194,1.38e-11,59;CL:0000576,1.38e-11,59;CL:0000040,1.38e-11,59;CL:0000559,1.38e-11,59;CL:0000557,1.50e-11,67;CL:0000839,4.11e-11,66;CL:0000860,5.32e-11,42;CL:0002057,5.32e-11,42;CL:0002368,1.50e-08,13;CL:0000223,9.81e-08,58;CL:0002077,2.61e-07,34;CL:0000066,5.28e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.56e-11!511;UBERON:0002390!3.02e-09!102;UBERON:0003061!3.02e-09!102;UBERON:0007023!9.71e-09!115;UBERON:0002371!4.83e-08!80;UBERON:0001474!3.23e-07!86;UBERON:0002193!4.34e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.15e-10,98;UBERON:0003061,1.15e-10,98;UBERON:0002371,5.02e-09,76;UBERON:0002193,1.61e-08,108;UBERON:0001474,1.02e-07,82;UBERON:0004765,1.44e-07,90 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.140954404095971,0,0,0,0,0,0.783556884599516,1.96587149201207,2.09340350391728,6.55324116390517,9.23184423799587,0,0,0,0,0,0,1.10808952269109,0.408001382488506,0.313454721478088,0.572471974262113,0.821246550437305,0.251085279189606,0.0764134057479513,0.0821005894499457,0.0787107813136792,1.96682138424452,1.53531759238885,5.41856431606266,42.2933763260306,47.5905351669635,127.565133507542,0,0,0,11.0799081706375,10.2277668209772,7.16135873362311,8.73270349535705,14.2513213048351,8.24241816429397,1.45398238779565,4.1566353805769,3.63876091781724,0.929716147622738,3.70051099219643,4.95530193432166,1.43846196161075,3.58624989140741,4.25668013799453,6.20542225325913,5.16387746867061,9.47985406160392,1.69418105588344,2.18324920046277,3.82029923556644,3.67300670845083,4.49300637906531,14.7047538933779,1.31940520074686,4.18873681005427,4.26224750532694,3.19230162491442,2.8369261234557,7.4738669879469,3.26623264833766,5.21482918420201,3.47502151528187,2.42159801053347,2.57794345191295,3.79754864929061,2.74631872205524,6.80333759888139,0.838634582033504,3.70684482783434,7.95937532059983,1.44653028027372,1.14005097496499,3.77941686678271,0,1.75996244461323,1.63841583378639,0.889509253863555,1.28019066769952,0.400395987036012,0,1.32208974556972,0,1.1384259382189,3.52342313622563,0.382273228125229,0,1.12101712596307,0.263384084775077,0.393419540227666,0,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0.950452044448374,0.752875595388864,0.127986611154418,2.49861453104692,0.236777252044017,3.28451198768419,0.201606743224732,1.06976078313403,0.434473211648397,2.43806866313962,0,0,0.361439152384566,0.50133791063589,0.869079113764942,0,1.45990461090791,0.0945348171640679,0.221729397462564,0.087834785693126,4.58426764241994,103.459861875082,68.9659063579039,5.51730569212962,7.66170844116776,8.64226743372624,0.238490624305342,0.571994910780128,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.488124115096339,0,0,0.17859945656816,0,0.337834441449967,0,0,0,13.1780417436063,19.3890132074163,134.316968059901,0,0.12663051166458,0,0.286836620748814,0.709336764396714,1.12135520028461,0,0.24666754841716,0.622422070799533,0.134710672069688,0,0.302714855289863,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0.204154171254893,0.61417158655884,0.103325781175765,2.37600571456411,0.247266929278557,0,0,0.336672227908132,0.250237039743928,0.277064115484183,0,0,0.901428353439581,0.453728732640084,1.61450672119976,0.427114777637135,0.423863802319124,1.50045548042201,1.44273540933814,2.83404594050192,2.97786970130544,0.675105328965065,0.389748020644795,0,0,0.969876340912871,0,0.403008392910561,0,54.1130388857231,48.8215555857594,33.5561376605134,0,0.265059536642971,0.232387885739037,0.207322110030741,0.504641701751257,0,0,1.28648187638577,1.38134921352481,0,0,0,0,0.241011029883482,0,0,0,0,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0.245976877086227,0,46.7536215840745,76.4331922151813,21.1110842064425,64.9045000561293,0,0,0,1.62302566965108,0,0.144366447761074,0,0,88.5028925714388,84.9901300473924,2.46217006087397,7.48813648445561,4.01304138179566,17.8094284574876,25.1973192298289,26.0866178925991,54.3620232806289,35.4573404987034,42.5554773873384,0,0,8.29312462163088,9.22367701868553,9.72066737383126,36.3842934294129,74.1057545583059,85.5687364633343,39.3466625852222,25.7068731758309,98.212179914961,60.5952037176826,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,8.5109479213967,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,8.51366464488333,0.502257091432126,2.10833939483032,2.39624855491583,2.29723871668228,0,0.144781306667579,0.410952645100767,0.537182889719687,0,0.985153801009636,0.215627574859517,0.128343036279748,0,0,0,0,0,20.9721966705211,56.8406772487647,49.7298616123242,0.24538298343828,0,0.542530047399471,0.207970861530807,1.24900292158013,0.473107245101804,0.819989904948992,0.300946099727719,0,1.03473071292505,0,0,0.173767228936166,1.76221041716467,4.11772108573027,1.86091223510599,4.52999821719095,3.842192080924,2.12189300012382,3.32870879020994,2.72151263996712,0.248107807818777,1.07423381301644,0.280660094433074,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,45.9159816994522,33.7016419505381,0.34444334449382,0,1.18011973463482,8.12159303233341,5.31405826020462,2.35304930753057,1.46139224653261,0.633309773357254,0,0,0.215915916102139,0,1.08378575017541,3.01013864312912,2.80363900349542,4.15538004464362,1.56712328305525,0,0,4.10320200186223,0.328014645699706,1.95227036798582,5.66725564062472,0.183138929636687,0.082509499920588,33.307401203778,27.3025303335339,0,0,0,0,0.413509717453592,0,0.145016693914229,0.0852266274161009,0,64.4611169907815,49.2006572454672,48.492830747942,74.2498111479736,0,0,0,0,0,0,0,0,1.48863347743867,0,0.190630193923825,0.767693373934002,0.42793898803392,0.318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| |||
|short_description=p1@ST6GALNAC2 | |||
}} |
Revision as of 17:29, 20 January 2014
Short description: | p1@ST6GALNAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ST6GALNAC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 187bp_to_ENST00000225276, NM_006456, uc002jsg.3_5end |
EntrezGene: | ST6GALNAC2 |
HGNC: | 10867 |
UniProt: | Q9UJ37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.59e-15 | 72 |
defensive cell | 5.27e-12 | 48 |
phagocyte | 5.27e-12 | 48 |
endo-epithelial cell | 8.26e-12 | 42 |
macrophage dendritic cell progenitor | 1.35e-11 | 61 |
monopoietic cell | 1.38e-11 | 59 |
monocyte | 1.38e-11 | 59 |
monoblast | 1.38e-11 | 59 |
promonocyte | 1.38e-11 | 59 |
granulocyte monocyte progenitor cell | 1.50e-11 | 67 |
myeloid lineage restricted progenitor cell | 4.11e-11 | 66 |
classical monocyte | 5.32e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.32e-11 | 42 |
respiratory epithelial cell | 1.50e-08 | 13 |
endodermal cell | 9.81e-08 | 58 |
ecto-epithelial cell | 2.61e-07 | 34 |
epithelial cell | 5.28e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.15e-10 | 98 |
blood island | 1.15e-10 | 98 |
bone marrow | 5.02e-09 | 76 |
hemolymphoid system | 1.61e-08 | 108 |
bone element | 1.02e-07 | 82 |
skeletal element | 1.44e-07 | 90 |