FFCP PHASE1:Hg19::chr18:46547875..46547888,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:46547875..46547888,- | |||
|id=chr18:46547875..46547888,- | |||
|ontology_enrichment_celltype=CL:0000066!3.85e-25!254;CL:0002251!1.54e-08!21;CL:0002076!2.18e-08!43;CL:0000244!2.61e-08!4;CL:0000731!2.61e-08!4;CL:0002150!1.59e-07!3;CL:0000861!1.59e-07!3;CL:0000223!2.49e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.56e-09;3!CL:0000313;9.07e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.51e-09,3;CL:0000313,1.99e-07,1;CL:0000066,4.67e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.42e-08;1 | |||
|ontology_enrichment_disease=DOID:305!1.01e-28!106;DOID:0050687!1.05e-17!143;DOID:1749!1.11e-12!14;DOID:162!2.81e-09!235;DOID:14566!8.12e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:3151;3.42e-08;1!DOID:3149;3.42e-08;1!DOID:2152;9.07e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.98e-09,106;DOID:3151,3.80e-08,1;DOID:3149,3.80e-08,1;DOID:2152,1.99e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.25e-21!169;UBERON:0000925!1.25e-21!169;UBERON:0006595!1.25e-21!169;UBERON:0001004!1.67e-16!72;UBERON:0001007!4.11e-16!155;UBERON:0001555!4.11e-16!155;UBERON:0007026!4.11e-16!155;UBERON:0000077!6.93e-14!130;UBERON:0004921!1.43e-13!129;UBERON:0004185!1.43e-13!129;UBERON:0005631!7.26e-13!14;UBERON:0000158!7.26e-13!14;UBERON:0000065!9.56e-13!53;UBERON:0001737!1.61e-12!9;UBERON:0008947!6.99e-12!38;UBERON:0003258!6.99e-12!38;UBERON:0001041!1.34e-11!98;UBERON:0001557!1.36e-11!19;UBERON:0000072!5.61e-10!46;UBERON:0000365!9.58e-10!5;UBERON:0000064!1.95e-09!219;UBERON:0003343!4.61e-08!4;UBERON:0004785!4.61e-08!4;UBERON:0005910!4.88e-08!6;UBERON:0005911!1.08e-07!82;UBERON:0000305!2.82e-07!7;UBERON:0003124!3.40e-07!7;UBERON:0000166!4.62e-07!21;UBERON:0000062!5.70e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.26e-15;4!UBERON:0002114;1.56e-09;2!UBERON:0000997;9.07e-08;1!UBERON:0004911;9.07e-08;1!UBERON:0004913;9.07e-08;1!UBERON:0005056;9.07e-08;1!UBERON:0003703;9.07e-08;1!UBERON:0004176;9.07e-08;1!UBERON:0001174;9.07e-08;1!UBERON:0004914;9.07e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.62e-15,4;UBERON:0004340,3.62e-15,4;UBERON:0005631,1.70e-11,14;UBERON:0000158,1.70e-11,14;UBERON:0002114,3.83e-09,2;UBERON:0003124,6.93e-09,7;UBERON:0000997,4.35e-08,1;UBERON:0005056,4.35e-08,1;UBERON:0004913,1.87e-07,1;UBERON:0003703,1.87e-07,1;UBERON:0001174,1.87e-07,1;UBERON:0004914,1.87e-07,1;UBERON:0004911,1.99e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0.655324116390517,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.272746120590835,0.860413786167011,0.243947412259191,0,0,0,0,0,0,0,0,0,0,0.946454400318751,0.505754070234305,0.723033089650446,0.220587945464788,0.217879444092406,0,0.539325232640658,1.37355025587742,0.769494313892781,0,0,0,0,0,0,0,0,0.368965315629341,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,1.34385702559088,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,1.23649213977267,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,1.12972560932135,0.43050537267123,1.68471475667626,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0.593929361665277,1.84296421259539,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0.269605053441981,0.716084698702437,0,0,0,0,0,0,0,0.7812832832557,0,0,0.796554137998498,2.54253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0.435753854075961,2.50962739701486,0.230850775511391,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,1.86185555087318,0.435296032902013,0,0,1.9351266257817,1.46178634172371,1.56019368401098,0.193978032976839,0,0,0,0,0,0.195551382734803,1.28254112402454,0,1.19885765749278,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,2.0126081255956,0.157611414598396,0,0,0,4.2221343410278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0.533937062838473,1.57204305099666,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.88332946650923,0.825788063434183,0.183428598521679,0.808679663052368,0,0,0,0,0,0,0,0,1.03499260351932,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,2.7497734750418,0,0,0,0,0.118193840883968,0,0,0,3.92381028639305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,1.00669888618013,0.392600934460972,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.617393264863557,0.655678681511872,0,0,0,0,0,0,0,0,0,0,1.60698544745092,0,0,0.730336388246517,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0.509944148709909,0.534434810531121,1.8378979906969,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0.653150243690884,0,0.26940821205835,0.143444410785353,0,0.407016343054873,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:46547875..46547888,- | |||
}} |
Revision as of 19:18, 20 January 2014
Short description: | p@chr18:46547875..46547888, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:46547875..46547888, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.51e-09 | 3 |
serous secreting cell | 1.99e-07 | 1 |
epithelial cell | 4.67e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
placenta | 3.62e-15 | 4 |
allantois | 3.62e-15 | 4 |
extraembryonic membrane | 1.70e-11 | 14 |
membranous layer | 1.70e-11 | 14 |
duodenum | 3.83e-09 | 2 |
chorion | 6.93e-09 | 7 |
mammalian vulva | 4.35e-08 | 1 |
external female genitalia | 4.35e-08 | 1 |
hepatopancreatic ampulla | 1.87e-07 | 1 |
extrahepatic bile duct | 1.87e-07 | 1 |
common bile duct | 1.87e-07 | 1 |
duodenal papilla | 1.87e-07 | 1 |
epithelium of female gonad | 1.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.98e-09 | 106 |
skin squamous cell carcinoma | 3.80e-08 | 1 |
keratoacanthoma | 3.80e-08 | 1 |
ovary epithelial cancer | 1.99e-07 | 1 |