FFCP PHASE1:Hg19::chr18:68137507..68137518,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:68137507..68137518,+ | |||
|id=chr18:68137507..68137518,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.75e-15;5!CL:0000047;1.80e-10;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!2.13e-08!6;DOID:171!2.91e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:9119;3.25e-19;1!DOID:169;4.52e-13;6!DOID:171;3.25e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,3.91e-19,1;DOID:169,5.11e-13,6;DOID:171,3.50e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.92e-61!57;UBERON:0005068!5.92e-61!57;UBERON:0006241!5.92e-61!57;UBERON:0007135!5.92e-61!57;UBERON:0000073!9.37e-52!94;UBERON:0001016!9.37e-52!94;UBERON:0001017!9.45e-50!82;UBERON:0002616!1.61e-48!59;UBERON:0002780!3.17e-48!41;UBERON:0001890!3.17e-48!41;UBERON:0006240!3.17e-48!41;UBERON:0000955!3.92e-48!69;UBERON:0006238!3.92e-48!69;UBERON:0005743!5.41e-47!86;UBERON:0003080!6.37e-47!42;UBERON:0001893!2.18e-42!34;UBERON:0002020!3.51e-42!34;UBERON:0003528!3.51e-42!34;UBERON:0002791!5.04e-40!33;UBERON:0002346!2.47e-37!90;UBERON:0003075!2.72e-37!86;UBERON:0007284!2.72e-37!86;UBERON:0001869!3.03e-37!32;UBERON:0007023!6.00e-31!115;UBERON:0003056!3.62e-30!61;UBERON:0002308!8.30e-27!9;UBERON:0000125!8.30e-27!9;UBERON:0000033!1.14e-24!123;UBERON:0000924!1.27e-24!173;UBERON:0006601!1.27e-24!173;UBERON:0004121!3.90e-24!169;UBERON:0000153!4.39e-23!129;UBERON:0007811!4.39e-23!129;UBERON:0009663!1.38e-21!7;UBERON:0002420!4.22e-21!9;UBERON:0007245!4.22e-21!9;UBERON:0010009!4.22e-21!9;UBERON:0010011!4.22e-21!9;UBERON:0000454!4.22e-21!9;UBERON:0000956!5.91e-21!25;UBERON:0000203!5.91e-21!25;UBERON:0001950!7.07e-20!20;UBERON:0002619!6.93e-18!22;UBERON:0002298!1.00e-17!8;UBERON:0003076!1.30e-14!15;UBERON:0003057!1.30e-14!15;UBERON:0000369!4.94e-13!4;UBERON:0002435!4.94e-13!4;UBERON:0000204!4.94e-13!4;UBERON:0010082!4.94e-13!4;UBERON:0000025!3.04e-12!194;UBERON:0000200!2.87e-11!6;UBERON:0005383!3.80e-10!3;UBERON:0005382!3.80e-10!3;UBERON:0000013!4.43e-10!5;UBERON:0002410!4.43e-10!5;UBERON:0006331!7.86e-10!3;UBERON:0002240!9.70e-10!3;UBERON:0001896!1.06e-09!3;UBERON:0005290!1.06e-09!3;UBERON:0010096!1.06e-09!3;UBERON:0000988!1.56e-09!3;UBERON:0002771!1.20e-08!3;UBERON:0004733!2.09e-08!12;UBERON:0002028!2.09e-08!12;UBERON:0007277!2.09e-08!12;UBERON:0001871!3.46e-08!7;UBERON:0004111!3.97e-08!241;UBERON:0004732!1.05e-07!13;UBERON:0001897!1.39e-07!2;UBERON:0001873!1.97e-07!2;UBERON:0010122!1.97e-07!2;UBERON:0001875!2.30e-07!2;UBERON:0006514!2.30e-07!2;UBERON:0001894!2.85e-07!7;UBERON:0006222!2.85e-07!7;UBERON:0002148!6.49e-07!2;UBERON:0009662!6.49e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;3.25e-19;1!UBERON:0011215;3.25e-19;1!UBERON:0001018;3.25e-19;1!UBERON:0002473;3.25e-19;1!UBERON:0005340;3.25e-19;1!UBERON:0003544;3.25e-19;1!UBERON:0005970;3.25e-19;1!UBERON:0002316;3.25e-19;1!UBERON:0001020;3.25e-19;1!UBERON:0002437;3.25e-19;1!UBERON:0000013;1.75e-15;5!UBERON:0002410;1.75e-15;5!UBERON:0001897;2.72e-10;2!UBERON:0005162;2.72e-10;2!UBERON:0000122;2.72e-10;2!UBERON:0010225;2.72e-10;2!UBERON:0000010;5.00e-09;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,5.62e-19,1;UBERON:0011215,5.62e-19,1;UBERON:0001018,5.62e-19,1;UBERON:0002473,5.62e-19,1;UBERON:0005340,5.62e-19,1;UBERON:0003544,5.62e-19,1;UBERON:0005970,5.62e-19,1;UBERON:0002316,5.62e-19,1;UBERON:0001020,5.62e-19,1;UBERON:0002437,5.62e-19,1;UBERON:0000013,2.02e-15,5;UBERON:0002410,2.02e-15,5;UBERON:0001897,2.27e-10,2;UBERON:0010225,2.27e-10,2;UBERON:0005162,3.58e-10,2;UBERON:0000122,3.58e-10,2;UBERON:0001016,2.82e-09,89;UBERON:0000010,5.42e-09,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.348259474598534,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49553699578462,0,0,0,0,0,0,0,0,0,0.649243880549111,0.280797178113459,0,0,7.51903431270201,0,0,0,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0,0,0,1.33228787199128,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0.60298219312704,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,1.14581926067151,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.332787154610557,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,1.1860729253635,0.314531883711793,4.6960144422566,0,0,0.123935764259002,0,0,0,0,0,0,0.834979926253974,1.41696576325585,0,0,0.504143392443436,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.337687923091973,0,0,0.317079050969534,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.339848664884159,0.131545547125698,0,0,0,0.471346769748006,0,0,0,0,0,0,2.44106993273063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.891139200981258,0.4226557275834,0,0,0,0,0,0,0,0,0,0.860037498908708,0.315543124386369,0.0679914901909147,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.535928260312357,1.65833887891756,0.724030971033267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:68137507..68137518,+ | |||
}} |
Revision as of 19:46, 20 January 2014
Short description: | p@chr18:68137507..68137518, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:68137507..68137518, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus callosum | 5.62e-19 | 1 |
central nervous system cell part cluster | 5.62e-19 | 1 |
axon tract | 5.62e-19 | 1 |
intercerebral commissure | 5.62e-19 | 1 |
dorsal telencephalic commissure | 5.62e-19 | 1 |
brain white matter | 5.62e-19 | 1 |
brain commissure | 5.62e-19 | 1 |
white matter | 5.62e-19 | 1 |
nervous system commissure | 5.62e-19 | 1 |
cerebral hemisphere white matter | 5.62e-19 | 1 |
sympathetic nervous system | 2.02e-15 | 5 |
autonomic nervous system | 2.02e-15 | 5 |
dorsal plus ventral thalamus | 2.27e-10 | 2 |
thalamic complex | 2.27e-10 | 2 |
multi cell component structure | 3.58e-10 | 2 |
neuron projection bundle | 3.58e-10 | 2 |
nervous system | 2.82e-09 | 89 |
peripheral nervous system | 5.42e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 3.91e-19 | 1 |
neuroendocrine tumor | 5.11e-13 | 6 |
neuroectodermal tumor | 3.50e-08 | 10 |