FFCP PHASE1:Hg19::chr19:3547895..3547904,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:3547895..3547904,+ | |||
|id=chr19:3547895..3547904,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.77e-15!10;CL:0000541!1.77e-15!10;CL:0000147!5.51e-11!14;CL:0002567!2.41e-09!3;CL:0002566!1.12e-07!1;CL:0000710!1.33e-07!20;CL:0000864!2.09e-07!1;CL:0000091!2.09e-07!1;CL:0002574!5.84e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002566;3.10e-50;1!CL:0000148;5.23e-45;10!CL:0000147;1.72e-32;14!CL:0000710;4.42e-23;20!CL:0000346;8.69e-18;3!CL:1000428;8.69e-18;3!CL:0002567;8.69e-18;3!CL:0000075;2.27e-17;27!CL:0002077;1.07e-11;34!CL:0002559;3.10e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,3.99e-50,1;CL:0000148,5.64e-45,10;CL:0000541,5.64e-45,10;CL:0000147,1.81e-32,14;CL:0000710,4.59e-23,20;CL:0000333,3.24e-19,41;CL:0000346,8.00e-18,3;CL:1000428,8.00e-18,3;CL:0002567,1.12e-17,3;CL:0000075,2.34e-17,27;CL:0002077,5.47e-14,34;CL:0000133,7.99e-14,59;CL:0000221,1.50e-11,72;CL:0002559,2.94e-11,5 | |||
|ontology_enrichment_development_v019=CL:0000133;1.82e-07;59 | |||
|ontology_enrichment_disease=DOID:3571!2.09e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.18e-23!9;UBERON:0001557!1.53e-14!19;UBERON:0000065!1.88e-09!53;UBERON:0008947!5.83e-09!38;UBERON:0003258!5.83e-09!38;UBERON:0002171!1.63e-07!1;UBERON:0006518!1.63e-07!1;UBERON:0008949!1.63e-07!1;UBERON:0000101!1.63e-07!1;UBERON:0002167!1.63e-07!1;UBERON:0000072!4.21e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;8.69e-18;3!UBERON:0001992;8.69e-18;3!UBERON:0002073;3.10e-11;5!UBERON:0002067;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,8.00e-18,3;UBERON:0001992,8.00e-18,3;UBERON:0002073,2.94e-11,5;UBERON:0005086,2.94e-11,5;UBERON:0002067,7.91e-07,9;UBERON:0004016,7.91e-07,9;UBERON:0010083,7.91e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0.482022059766964,0.110293972732394,0.435758888184812,0,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,1.26995788584338,0.763976851116555,1.17217447210047,0,1.43958489784653,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr19:3547895..3547904,+ | |||
}} |
Revision as of 20:32, 20 January 2014
Short description: | p@chr19:3547895..3547904, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:3547895..3547904, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 3.99e-50 | 1 |
melanocyte | 5.64e-45 | 10 |
melanoblast | 5.64e-45 | 10 |
pigment cell | 1.81e-32 | 14 |
neurecto-epithelial cell | 4.59e-23 | 20 |
migratory neural crest cell | 3.24e-19 | 41 |
hair follicle dermal papilla cell | 8.00e-18 | 3 |
stem cell of epidermis | 8.00e-18 | 3 |
light melanocyte | 1.12e-17 | 3 |
columnar/cuboidal epithelial cell | 2.34e-17 | 27 |
ecto-epithelial cell | 5.47e-14 | 34 |
neurectodermal cell | 7.99e-14 | 59 |
ectodermal cell | 1.50e-11 | 72 |
hair follicle cell | 2.94e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 8.00e-18 | 3 |
papillary layer of dermis | 8.00e-18 | 3 |
hair follicle | 2.94e-11 | 5 |
hair follicle placode | 2.94e-11 | 5 |
dermis | 7.91e-07 | 9 |
dermatome | 7.91e-07 | 9 |
future dermis | 7.91e-07 | 9 |