FFCP PHASE1:Hg19::chr19:14049032..14049055,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79883 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26275 | |||
|TSSclassifier=weak | |||
|UniProt=Q6PEZ8 | |||
|association_with_transcript=-154bp_to_ENST00000254320,uc010xni.1_5end | |||
|description=CAGE_peak_4_at_PODNL1_5end | |||
|id=chr19:14049032..14049055,- | |||
|ontology_enrichment_celltype=CL:0000055!1.16e-18!180;CL:0000057!9.84e-15!75;CL:0002620!3.33e-09!23;CL:0000667!2.12e-07!6;CL:0000058!2.12e-07!6;CL:0000138!2.12e-07!6;CL:0000499!6.29e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000138;8.36e-12;6!CL:0002580;3.17e-09;3!CL:0000499;3.72e-09;28!CL:0002579;6.56e-09;3!CL:0002559;2.95e-08;5!CL:0000135;2.95e-08;3!CL:0000388;2.95e-08;3!CL:0000327;4.67e-08;15!CL:0002334;8.34e-08;12!CL:0000153;1.04e-07;9!CL:0000447;1.04e-07;9!CL:0002620;1.62e-07;23!CL:0000057;8.20e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.64e-16,76;CL:0000058,8.71e-12,6;CL:0000138,8.71e-12,6;CL:0002580,2.63e-09,3;CL:0002320,3.22e-09,361;CL:0000499,3.76e-09,28;CL:0002579,7.15e-09,3;CL:0002559,2.24e-08,5;CL:0000134,2.31e-08,354;CL:0000327,4.46e-08,15;CL:0000135,4.61e-08,3;CL:0000388,4.61e-08,3;CL:0002334,7.97e-08,12;CL:0000153,1.06e-07,9;CL:0000447,1.06e-07,9;CL:0000219,1.34e-07,386;CL:0002620,1.50e-07,23;CL:0000048,3.91e-07,427;CL:0000723,7.45e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.70e-08!365;UBERON:0003688!1.69e-07!6;UBERON:0002358!1.69e-07!6;UBERON:0003684!1.69e-07!6;UBERON:0001178!1.69e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.99e-11;6!UBERON:0002358;3.99e-11;6!UBERON:0003684;3.99e-11;6!UBERON:0001178;3.99e-11;6!UBERON:0002073;2.95e-08;5!UBERON:0007846;2.95e-08;3!UBERON:0000043;2.95e-08;3!UBERON:0007845;2.95e-08;3!UBERON:0004457;2.81e-07;9!UBERON:0000042;2.81e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.61e-11,6;UBERON:0002358,3.61e-11,6;UBERON:0003684,3.61e-11,6;UBERON:0001178,3.61e-11,6;UBERON:0002384,7.87e-10,371;UBERON:0002073,2.24e-08,5;UBERON:0005086,2.24e-08,5;UBERON:0007846,4.61e-08,3;UBERON:0000043,4.61e-08,3;UBERON:0007845,4.61e-08,3;UBERON:0002199,8.43e-08,46;UBERON:0002416,8.43e-08,46;UBERON:0002097,1.10e-07,41 | |||
|phase1_expression=1.45342703416445,0,0.704772020479856,3.00219895059391,1.78784437770915,0,5.06599756336621,0,0,0,0,0,0,0.74259811776028,0.662794751455832,0.672325146451775,0,0,0,0.369363174230364,0,1.56727360739044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,2.53007406669196,3.00802746381534,2.31754430337318,27.0397221997374,11.1926020169606,0.378139268656271,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0,0,3.44203944898576,0,0,0,1.48000529050296,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,1.18800285728205,1.23633464639278,0.910161361938026,2.15585442544872,0,0.125118519871964,0.277064115484183,0.877955241761676,0.30648779579902,1.50238058906597,0,0.89694817844431,1.92201649936711,1.05965950579781,0.900273288253207,1.13357782162283,0,1.8611685633159,3.54430297706659,7.50264939741229,1.51460264546469,3.03764665519588,0.80823028409406,3.55009592516614,0.906768884048762,0.67824236924195,0,0,0,0,0,0,0,0,0,0,1.92972281457866,1.38134921352481,3.25057549622385,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58299127318808,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80980402060889,21.4593867511129,0,0.531876233169741,0,0.771622122786426,0,0.266422179016099,1.57275793023962,10.3098105024374,1.64648067356154,0,0.710783897485092,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,4.9076596687656,5.50187573165645,0.542530047399471,0.831883446123229,0,0.788512075169673,0.234282829985426,2.10662269809403,25.0148254461583,0,0.664225598535437,0.737476674166813,0.521301686808497,0.195801157462741,0.343143423810856,0,0,0,0,0,0,2.72918588600655,6.59886485138669,5.89386198309454,1.40953064181271,12.7926812266676,3.21707842287215,0,0,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0,1.7222167224691,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0.270946437543853,2.00675909541941,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.515205058238611,0.27470839445503,0.247528499761764,0,0,0,0.290012154876366,0,0,0,1.28904293841928,0.725083469571143,0.0852266274161009,0.267096106940212,0,0.384380134730212,0,0.50578890427775,0,0.94443704049192,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,0,0,0,0,0.359744915166629,1.09814811894422,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0,0,1.14729081763241,2.25972794330179,0.35667105148125,0.354761064070598,0.633322905892992,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.331737779793674,0,0.438770794307945,0,0,0.384751292518985,9.6850747469951,0,0,0,3.19001159731919,0.183195186803725,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.821425535170343,0,0,0,0,0,0,0.284609546029793,0,0,0.293977192243133,0,0,0,0,0,0,0.193978032976839,0.176512253383001,1.12990370390266,0.274083849293502,0,0,0,7.05397618213497,0,0.19980960958213,0,0,0,0,0,0,0.951329442515298,0.418411385249333,0.305994652908965,2.02265412931063,0,0.273810757783986,0,0,0,1.39641200636127,0.229160424011684,0,0,0,0,0.0671834724867263,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,2.28841683889275,0,0,0,0,0,0.511164065356265,0.906496732161005,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.496771223531068,0,0,0,0,0,0,0,0,0.934853239388898,0,0,0.251567901752575,0,0,0,0.310874401165561,0,0,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,1.37358282073117,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0.567515953566836,0.368211900503681,0,0,0,0.107824811396682,0,0,0,0,0,0,0.636008701306837,0,0,2.46873160583479,2.4499638188256,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,8.00902400481051,0,0.596748666348824,0.150420656698515,0.40341013740704,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0,4.52382087829458,0,6.34505634918448,0.40781839786099,0,0,0,0.313972371402056,0.157115589916002,0,0,0,0,0.643288897589907,0,0,0,1.60342272946051,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,1.69927114687817,0,0,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0.135982980381829,0,0,1.11598505450025,3.69740502905135,1.29787968637137,0,0,0,0,0,0,0,0.606229585745915,0.267964130156178,0,0,0.852935927603924,0,0,0,0.112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| |||
|short_description=p4@PODNL1 | |||
}} |
Revision as of 21:44, 20 January 2014
Short description: | p4@PODNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PODNL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -154bp_to_ENST00000254320, uc010xni.1_5end |
EntrezGene: | PODNL1 |
HGNC: | 26275 |
UniProt: | Q6PEZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.64e-16 | 76 |
chondroblast | 8.71e-12 | 6 |
chondrocyte | 8.71e-12 | 6 |
preadipocyte of the breast | 2.63e-09 | 3 |
connective tissue cell | 3.22e-09 | 361 |
stromal cell | 3.76e-09 | 28 |
omentum preadipocyte | 7.15e-09 | 3 |
hair follicle cell | 2.24e-08 | 5 |
mesenchymal cell | 2.31e-08 | 354 |
extracellular matrix secreting cell | 4.46e-08 | 15 |
fibrocyte | 4.61e-08 | 3 |
tendon cell | 4.61e-08 | 3 |
preadipocyte | 7.97e-08 | 12 |
GAG secreting cell | 1.06e-07 | 9 |
carbohydrate secreting cell | 1.06e-07 | 9 |
motile cell | 1.34e-07 | 386 |
skin fibroblast | 1.50e-07 | 23 |
multi fate stem cell | 3.91e-07 | 427 |
somatic stem cell | 7.45e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.61e-11 | 6 |
peritoneum | 3.61e-11 | 6 |
abdominal cavity | 3.61e-11 | 6 |
visceral peritoneum | 3.61e-11 | 6 |
connective tissue | 7.87e-10 | 371 |
hair follicle | 2.24e-08 | 5 |
hair follicle placode | 2.24e-08 | 5 |
dense regular connective tissue | 4.61e-08 | 3 |
tendon | 4.61e-08 | 3 |
regular connective tissue | 4.61e-08 | 3 |
integument | 8.43e-08 | 46 |
integumental system | 8.43e-08 | 46 |
skin of body | 1.10e-07 | 41 |