FFCP PHASE1:Hg19::chr2:4634459..4634466,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_at_chr2:4634459..4634466,+ | |||
|id=chr2:4634459..4634466,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.71e-14;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!5.27e-53!10;DOID:3095!1.51e-24!22;DOID:2994!1.51e-24!22;DOID:169!7.58e-23!6;DOID:3193!7.67e-18!2;DOID:962!7.67e-18!2;DOID:1192!2.31e-12!3 | |||
|ontology_enrichment_disease_v019=DOID:171;1.10e-59;10!DOID:3193;5.96e-34;2!DOID:962;5.96e-34;2!DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22!DOID:1192;3.66e-23;3!DOID:169;2.59e-12;6!DOID:3093;8.14e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.10e-59,10;DOID:3193,7.05e-34,2;DOID:962,7.05e-34,2;DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22;DOID:1192,4.09e-23,3;DOID:169,2.74e-12,6;DOID:3093,8.38e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000013!3.55e-27!5;UBERON:0002410!3.55e-27!5;UBERON:0003714!7.67e-18!2;UBERON:0000010!1.31e-15!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.83e-66;4!UBERON:0000923;2.83e-66;4!UBERON:0010316;2.83e-66;4!UBERON:0005291;2.83e-66;4!UBERON:0002050;2.51e-53;5!UBERON:0005423;2.51e-53;5!UBERON:0003714;5.96e-34;2!UBERON:0000013;1.71e-14;5!UBERON:0002410;1.71e-14;5!UBERON:0000010;1.16e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,7.05e-34,2;UBERON:0000013,1.83e-14,5;UBERON:0002410,1.83e-14,5;UBERON:0000010,1.21e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,1.18812770967818,0,3.22232987073406,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:4634459..4634466,+ | |||
}} |
Revision as of 01:33, 21 January 2014
Short description: | p@chr2:4634459..4634466, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr2:4634459..4634466, + |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 7.05e-34 | 2 |
sympathetic nervous system | 1.83e-14 | 5 |
autonomic nervous system | 1.83e-14 | 5 |
peripheral nervous system | 1.21e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.10e-59 | 10 |
peripheral nerve sheath neoplasm | 7.05e-34 | 2 |
neurofibroma | 7.05e-34 | 2 |
germ cell and embryonal cancer | 7.08e-28 | 22 |
germ cell cancer | 7.08e-28 | 22 |
peripheral nervous system neoplasm | 4.09e-23 | 3 |
neuroendocrine tumor | 2.74e-12 | 6 |
nervous system cancer | 8.38e-07 | 11 |