FFCP PHASE1:Hg19::chr2:99757848..99757871,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80705 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14927 | |||
|TSSclassifier=strong | |||
|UniProt=F8WA32 | |||
|association_with_transcript=10bp_to_ENST00000393482,ENST00000539964,uc010fin.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_10_at_TSGA10_5end | |||
|id=chr2:99757848..99757871,- | |||
|ontology_enrichment_celltype=CL:0000625!4.58e-07!11 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!4.97e-20!32;UBERON:0001049!5.54e-19!57;UBERON:0005068!5.54e-19!57;UBERON:0006241!5.54e-19!57;UBERON:0007135!5.54e-19!57;UBERON:0001893!1.69e-18!34;UBERON:0007023!4.26e-18!115;UBERON:0002616!4.80e-18!59;UBERON:0002780!9.70e-18!41;UBERON:0001890!9.70e-18!41;UBERON:0006240!9.70e-18!41;UBERON:0002791!1.96e-17!33;UBERON:0003080!3.71e-17!42;UBERON:0002020!9.38e-17!34;UBERON:0003528!9.38e-17!34;UBERON:0000955!3.55e-16!69;UBERON:0006238!3.55e-16!69;UBERON:0001017!3.78e-14!82;UBERON:0000153!4.04e-14!129;UBERON:0007811!4.04e-14!129;UBERON:0003075!2.07e-13!86;UBERON:0007284!2.07e-13!86;UBERON:0002619!4.29e-13!22;UBERON:0005743!4.54e-13!86;UBERON:0001950!8.93e-13!20;UBERON:0000033!1.24e-12!123;UBERON:0002346!2.10e-12!90;UBERON:0000073!7.09e-12!94;UBERON:0001016!7.09e-12!94;UBERON:0003056!7.48e-12!61;UBERON:0000956!4.05e-11!25;UBERON:0000203!4.05e-11!25;UBERON:0009663!8.61e-10!7;UBERON:0002420!1.16e-09!9;UBERON:0007245!1.16e-09!9;UBERON:0010009!1.16e-09!9;UBERON:0010011!1.16e-09!9;UBERON:0000454!1.16e-09!9;UBERON:0000369!2.84e-08!4;UBERON:0002435!2.84e-08!4;UBERON:0000204!2.84e-08!4;UBERON:0010082!2.84e-08!4;UBERON:0001871!1.21e-07!7;UBERON:0002308!2.23e-07!9;UBERON:0000125!2.23e-07!9;UBERON:0004121!2.94e-07!169;UBERON:0005383!6.24e-07!3;UBERON:0005382!6.24e-07!3;UBERON:0000924!7.29e-07!173;UBERON:0006601!7.29e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001875;1.07e-17;2!UBERON:0006514;1.07e-17;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0001875,1.27e-17,2;UBERON:0006514,1.27e-17,2;UBERON:0003135,4.00e-13,11;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77901850772711,0,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0.535081656179426,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0.520855522170466,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.663475559587348,0,0,0,0.139423744278603,0.0769502585037971,0,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0,0,0.0846733320657845,0,0.136203406111576,0,0.137539436597234,0,0,0,0.242998226632099,0,0.0788057072991982,0.209818352539992,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0,0.138314504928436,0.322951291263702,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0.261906694481422,0,0,0.135075169236789,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0.118193840883968,0.111231401892069,0.078493092850514,0.942693539496011,0.280272163313789,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0.917458566809082,0,0,0.271965960763659,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,10.1543455612441,6.96706738406064,0,0,0,0.714193294391221,0.0645889098360061,0.31037357147929,0,0.0636471582781649,0,0,0,0.26940821205835,0.215166616178029,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p10@TSGA10 | |||
}} |
Revision as of 04:35, 21 January 2014
Short description: | p10@TSGA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TSGA10_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 10bp_to_ENST00000393482, ENST00000539964, uc010fin.1_5end |
EntrezGene: | TSGA10 |
HGNC: | 14927 |
UniProt: | F8WA32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
globus pallidus | 1.27e-17 | 2 |
pallidum | 1.27e-17 | 2 |
male reproductive organ | 4.00e-13 | 11 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |