FFCP PHASE1:Hg19::chr2:201936479..201936506,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4709 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7698 | |||
|TSSclassifier=strong | |||
|UniProt=O43676,Q6IB80 | |||
|association_with_transcript=17bp_to_ENST00000237889,NM_002491,uc002uwx.3_5end | |||
|description=CAGE_peak_3_at_NDUFB3_5end | |||
|id=chr2:201936479..201936506,+ | |||
|ontology_enrichment_celltype=CL:0000220!3.74e-11!246;CL:0002321!4.39e-11!248;CL:0000548!1.37e-09!679;CL:0000004!1.37e-09!679;CL:0000255!1.37e-09!679;CL:0000012!7.61e-09!682;CL:0000222!1.05e-08!119;CL:0002371!3.39e-08!591;CL:0000144!2.28e-07!625;CL:0000393!6.55e-07!60;CL:0000211!6.55e-07!60;CL:0000055!9.40e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.66e-09,250;CL:0000222,1.15e-08,121;CL:0000393,4.28e-08,61;CL:0000211,4.28e-08,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!7.61e-08!138 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,5.71e-09,148;UBERON:0003104,1.83e-07,160;UBERON:0009142,1.83e-07,160 | |||
|phase1_expression=1.63510541343501,1.49870366723688,2.67813367782345,0,3.12872766099101,2.61701557230111,0,0.631719873426831,0.261185628199839,2.21160542851358,0.697801167972428,0.436882744260345,1.84636884759917,0.37129905888014,1.98838425436749,3.36162573225888,4.82155622419182,7.30310090387373,2.92759679274304,2.33930010345897,2.04000691244253,0.626909442956176,2.28988789704845,2.05311637609326,1.75759695432724,1.60468152070698,1.72411237844886,2.2826126580967,0,0.383829398097213,0.154816123316076,0,0.90361775633475,0,1.93668001450754,1.42169232487422,0.880801318004542,0.553995408531877,0.200544447470142,0,1.79132379391939,1.29557466407592,1.28787783817093,1.16318591023652,0.755751887377619,1.21292030593908,1.16214518452842,0,0.619412741790207,0.575384784644301,0.768482119587302,0.945928919554341,1.03423704220986,1.29096936716765,2.70852973188684,0.564727018627814,0.545812300115692,1.34834090667051,1.83650335422542,0.320929027076094,0,0.659702600373432,0.598390972864896,0,0.290209238628584,0,0,1.7587406567972,0,0.868755378820466,0.605399502633369,0.368277635987565,0.949387162322653,0.422510572623884,0.425208599930087,0.628975936525128,0.561643155732475,0.600707571366025,0.803627933485401,0.855038231223746,0.79566670879636,0.365328307529268,0,1.63841583378639,3.55803701545422,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,0,0,0,0,0,0.526768169550154,0,0.393010762749165,0,0.167186495390678,0.32592226663359,0,0,0.668462741311041,0,0.221533894583621,0.812411591295047,1.0247305578054,0.910415432919148,1.80881695064044,1.93445012450094,1.15921234294021,0.14828656316206,0.267540828089713,0,1.0197840842781,0,0,0,0,0,0,1.20460095262218,0.383959833463255,1.24930726552346,1.89421801635213,0,0.201606743224732,0,0,0,4.02420515822182,2.04580098949649,1.80719576192283,1.50401373190767,1.15877215168659,0.795285947051099,1.45990461090791,2.45790524626576,1.77383517970051,1.40535657109002,3.6019245761871,0,0.370784442784429,4.21911611751088,1.91542711029194,2.26028532882071,0,0,0.74291500265913,2.78267370313387,3.4409383804245,1.73570250803797,0.56530794192401,1.67799774483962,1.37559020970034,2.08994966536811,2.84258435086262,2.84613010149368,1.33888245105868,2.81980521976403,4.56163263431108,0.976248230192678,4.04429388380456,1.62028389576352,2.67899184852239,2.91888184414021,2.13961812918312,0,0.949265659568129,1.83201743930407,0,0,0,0.496971951695318,1.51956613997496,0.926864265692532,0,1.06400514659507,2.80338800071154,0,0.98667019366864,0.933633106199299,0.538842688278752,4.25000948094993,0.908144565869588,0,0,0.312160076830321,2.85235910772225,1.49448680551801,1.64408298101271,1.61872944368132,1.54495887372473,1.42907919878425,1.71968044236475,0.413303124703062,1.18800285728205,1.23633464639278,0,1.43723628363248,2.86171393721913,0.750711119231785,1.10825646193673,1.31693286264251,2.14541457059314,1.35214253015937,4.8775838758809,0,1.49490172172997,1.90738711043606,0.600182192168805,1.03052529238439,0,0.558350568994769,0.168776332241266,1.36411807225678,0.504867548488229,1.56484827691909,1.13152239773168,0,1.41052937518696,1.18692414617341,2.31913023795956,1.90922284413584,0.860413786167011,0.975789649036763,1.19276791489337,0.929551542956147,0.621966330092223,1.00928340350251,0.36497735907583,1.56449532329816,1.28648187638577,1.38134921352481,2.3218396401599,2.16563844500876,2.24782920075703,1.68584690078102,0.482022059766964,1.7647035637183,1.52515610864684,0.949082476444386,1.8876383142423,1.96221465125346,1.15424147083917,1.4763109092493,0,2.4694440679884,5.88034845542168,1.26755034821831,0.982827216677626,0.590789906681404,3.5317047953172,1.47586126251736,2.40194934417936,0.878002283269004,0,0.502644862058154,0.648119116109707,1.3032332212413,2.07986957055916,2.88662684050547,2.66639931442677,0.70445216541493,2.30986316417718,4.1668696131895,3.99533719692656,1.58040879591855,0,2.46217006087397,5.14809383306323,2.22946743433092,5.62403003920662,0.671928512795438,0.850650583454319,0.53735113621709,0,0.766765358330422,0.492663237895943,0.880484340132261,0.207328115540772,0,0,1.39695367442772,1.90994212779139,2.34434894420094,1.71072446022705,2.26220483947312,2.10240140490742,1.71495859578347,1.90622843387113,3.05172048183296,2.933531432838,1.16344544182,0,1.690605505112,0.797814349754612,3.12022310734098,2.57207374262142,1.41849132023278,2.66422179016099,1.14382394926518,1.08524321078289,0.823240336780769,2.93162565864362,1.77695974371273,2.37585561880029,2.1100756394171,3.48613383440118,1.09970290300263,4.86495122564762,2.51128545716063,4.21667878966063,1.4377491329495,2.29723871668228,0,2.60606352001643,1.43833425785268,0.895304816199478,0.560425719967636,0.197030760201927,0.215627574859517,0,2.03275699377971,2.60279707715243,3.09315525111078,1.17261385734044,3.82763250991898,2.24702107184155,0,1.24324654030811,0.24538298343828,0.500170521059677,1.08506009479894,1.45579603071565,0.892144943985809,1.10391690523754,1.40569697991256,0.300946099727719,0,2.0694614258501,0.664225598535437,0.368738337083406,1.65078867489357,0.979005787313703,1.02943027143257,0.206768026122887,0.431428401637234,0.213455115606889,1.81876542867756,1.66435439510497,0.907170879989041,1.48864684691266,0.61384789315225,0.280660094433074,1.40953064181271,1.02341449813341,1.44768529029247,0,1.3878872442239,2.30830242907065,1.64254312027618,2.59627214591811,1.85936605535935,2.77976734060731,1.40354529212299,0.920809889358963,2.06666006696292,2.1850940160806,1.04899531967539,0.451199612907412,1.23224539367064,0.784349769176855,2.92278449306521,1.16106791782163,2.27466768141793,1.70093705276516,1.94324324491925,0,1.08378575017541,1.00337954770971,1.27438136522519,1.66215201785745,1.79099803777743,3.28889814968902,4.96727356947311,3.59030175162945,1.64007322849853,1.62689197332152,0.721287081534056,2.56394501491362,2.14524699793529,1.72279661398852,0.650060246036521,3.21367859688319,0.48335359146061,2.7728751080636,2.76306614507033,3.03240459465967,1.50388342815583,1.16013355131383,2.30111894023472,1.51354460599453,0.661139661443912,0.576570202095319,0.638063562472921,0.4046311234222,1.39453664789186,0,0.6970372701606,1.84820148105653,1.59691809095107,0,2.40921484835096,1.28812398067792,1.86079184679834,4.42931194606216,1.90630193923825,0.511795582622668,0.855877976067841,1.27281299170375,1.56989728039846,4.13706652441624,2.47083326762449,2.35624804691373,2.02182481573316,0,0.421258456238981,0.48763373908959,2.92456187557541,0,2.18399858252777,1.27264888758341,1.13008116620243,1.10273068709225,1.32687795048244,1.31535265576129,2.31510213706675,1.9676842561399,2.43492452355245,1.54911749049875,3.09865162785466,3.29846110069318,2.94747123039363,1.78335525740625,4.96665489698837,0.633322905892992,0.987884678879706,0.379473173765715,0.699869440489966,1.34710957815717,2.01090682660736,2.17781969722645,1.60044461320525,2.15252686335615,1.68471475667626,1.33029046061003,1.83778720165568,1.01489521846434,0,1.70894156152249,0.476463550915578,0.411362273086194,1.94541993357815,1.62009431171434,0,0.320472213382419,0,0.490080431962063,2.41544127663434,1.87549976869378,0.640276590135727,5.26106700005114,1.1974762285969,2.10655907145603,0.846694330895531,1.29848776109822,1.40398589056729,0.684704037099577,4.38703708164465,0,1.69291777801603,2.08764497634809,0.605399121573143,0.851692475380653,2.06103206853459,3.07240764308458,3.57881772627865,2.83643540910244,1.56310476321632,0.278406173895242,1.23087398947712,2.70455678475983,0,0,0.748562161632879,0.439524537815682,1.09224469574562,0.557216921387392,2.84136146806413,0.95497793895076,2.37571744666111,0.921482106297696,0.994147647766298,0.984685914873589,0.890469640183247,0.988823245360557,0.422250816255987,0.19924798825107,1.38141957765574,1.76352923497993,0.920418142519393,0.738508832766417,4.66559381492711,0.269605053441981,2.32727527078292,1.02314474045374,0.493217028184668,0,0,0,1.20598527610407,0,2.08342208868187,0.0874599999961957,0.724999575434793,0.910347586283997,2.03402920234213,1.18193840883968,1.37897349296586,1.16641845353302,0.868124974666461,0.885741385813839,1.08536794762867,0,0.663475559587348,0.295547618953547,2.19385397153973,0.544692317594951,0.41827123283581,0.615602068030377,3.07643550786903,0.922255617552241,1.34636466614658,0.325942115766024,0.638002319463839,1.74035427463538,0.533034776018635,2.04386596391473,0.627921025580099,0.332423363800313,1.1279783030859,1.76456280885966,1.84603745673427,4.17458211993207,1.11255605286265,1.26598838716816,1.14262965711403,2.54435528581093,1.29833183845255,0,0.619202951523374,1.22206028986725,1.48260564340311,3.08909847366257,2.71497068714184,0.67401132980677,2.40773294189637,1.1713222286267,0.182454789215666,0.782658475728359,0.242780379534093,0,0,0.61214552326098,0.189559738885464,4.50970258243478,4.25121584728713,0.664653872707185,1.98595173525299,1.2557316736289,0,0.569219092059585,2.08012009519708,3.12407529003236,0.195984794828755,0.609414446062818,0.34945333648406,1.0319161948297,1.9351266257817,0.803982487948041,1.31384731285135,0.678923115418936,0.794305140223502,0.677942222341597,1.50746117111426,2.98071917554485,1.07628353124994,1.36885967914362,1.60317640503067,1.70762395791482,1.19885765749278,1.44090417154106,1.60351234632282,0.686379991447858,3.88947954568004,0.49701014226173,1.41416420770077,3.39760515184035,3.66109962093166,1.32597682927218,0.288950589901519,1.20084057741958,0.273810757783986,0,0.859530882839914,0.788662062837943,1.67569440763353,2.29160424011684,2.15361907373044,1.59743200399193,1.71690419254628,4.46342914883745,1.2764859772478,0.720599767084807,0,2.52106183383116,3.87354534391482,2.96575592958414,0.688992370603241,0.931406652723629,1.59045937961861,1.0896272488926,2.89355667237035,2.88832816854191,5.81616473240859,0.449947783103001,0,1.39723980313457,1.0063040627978,2.91581117007033,1.15400093896996,0.422401346077626,1.43429871466276,0.767660789277781,7.14695326373367,0.662091970365432,1.77987976358325,0,3.45688596480507,1.95952416065645,2.39460383124975,0.492555124496034,1.5334921960688,0.679872549120754,0.146552233678082,2.65013777824443,1.29282956361551,0.92562821219883,1.36869470307464,2.11444506695002,0.533937062838473,0,0,0,1.38328142328561,3.65377795142688,0,1.08803560673895,0.7520696820681,1.53172788381731,0.655745261419609,0.157054096250234,0.886068179966986,2.56255156294123,1.502291168478,0.573409195690071,1.22021956690538,0.683060432355218,0.138348634936231,1.12482367165896,3.63957882099955,1.7127920012698,0.705797459094515,2.34167452903441,1.88397337194073,1.94031243752936,0.934853239388898,2.21922344601045,1.7046270474758,1.76097531226803,6.22867855117575,1.37304041038154,0.604923695052956,1.86524640699337,2.06997209985487,2.86734180894664,1.79921244865442,2.63947026689641,1.65882483136342,3.45594228925393,0.521745061811734,2.10360652596106,3.04644169735036,2.03435366602331,2.00033525122815,2.57785336901972,2.32016879939247,0.796191777397232,3.20022211730523,2.06037423109676,1.34699795506368,2.52369796457302,1.73357847366573,2.35885750512418,1.04397716786085,1.36023555307363,0.694567422971502,0.97894681802587,0.895444205407437,0.926404341482917,0.219284049578707,1.94358060540469,1.3503982678964,1.8583668471838,3.8436227788192,0.690860683462397,0.911579868532147,1.10606748921385,1.16916185303633,1.0629187225069,1.14495775979091,5.2417575815426,0.983091635014877,0.211312123358627,1.9998739585493,1.28030075632969,0,0.567515953566836,0.920529751259204,1.53867458491389,1.24415452006595,0.895260599125562,1.07824811396682,1.25812753484717,1.09209638192014,1.18812770967818,0.425149840203366,0.371807292777007,1.67593475391973,0.636008701306837,0.315446980005013,3.20228299314188,2.1160556621441,1.531227386766,0.642292250964595,0,1.75597244962866,1.64093091392604,1.00828678488687,0.691572524642179,1.13032951942296,0,0.588886311006154,0.943757786781923,0.733714394086716,0.693153996902029,1.1441462864015,1.3807198521202,0.596748666348824,0.225630985047772,0.20170506870352,0,0.785720083444267,1.14640342257068,1.18284868973636,0.87798860003913,1.56215619722769,0.413373593002368,1.14148458349032,0.546974809018219,1.09651553371436,0.992422356778588,0.351742488719241,1.53314913167514,0.535701835878287,1.00885116665647,0,2.04895972216168,1.1531308121143,3.45701962667338,1.37190407549935,1.69924332442079,1.24968269769413,3.30942754475111,1.22354542081276,0.549451649953598,0.314231179832004,0.280272163313789,0.913158720509496,1.29556554731173,1.43325506366115,0.714765441766563,0.94808167039636,0.929931402945002,2.26015753993353,0,0.62164849248911,0.17071847709395,0,0.430227358820278,2.12997601315018,1.619054690424,0.423387050190929,0.9164274741762,2.17144469965024,15.2886230236389,0.335566295393377,1.17780280338292,2.07260472469858,0.647428837187895,1.02662806856247,0,0.485710993059139,0.935757853848423,0.994753875806841,0.951360726220549,0.5647304101948,0.879524133963433,1.50962843566674,1.15761237161917,0.218559560503957,1.88126918544609,0.490296643507811,0.471353094203252,0.981542335574726,0.297046400327086,1.6906229103336,1.0195626881269,0.845855261818682,0.773494655682926,1.09935271517422,0.357107877211315,0,1.60482733378337,0,0.917458566809082,0.860037498908708,1.26217249754548,1.15585533324555,0.872701380680755,1.0580536810308,2.23197010900051,1.38652688589425,1.29787968637137,1.38783067318587,0.98339014767326,1.77377901416012,0.509944148709909,0.534434810531121,0.551369397209069,0.752122617877125,5.07717278062204,7.77095977452918,0,0.724030971033267,2.34557380091079,0.23806443146374,0.904244737704086,0.186224142887574,0.560659312903067,1.20929600728513,0.808468755832877,0.870866991587845,0.342233301085281,0.875576689189638,0.932388670104793,1.33064142618405,1.87227517805241,1.17400080465487,1.9307228228694,0.808426818959282,0,0.366724332548599,0.813792356631477,0,0.805095174364105,1.60284246151616 | |||
|short_description=p3@NDUFB3 | |||
}} |
Revision as of 07:52, 21 January 2014
Short description: | p3@NDUFB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NDUFB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000237889, NM_002491, uc002uwx.3_5end |
EntrezGene: | NDUFB3 |
HGNC: | 7698 |
UniProt: | O43676Q6IB80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.66e-09 | 250 |
mesodermal cell | 1.15e-08 | 121 |
electrically responsive cell | 4.28e-08 | 61 |
electrically active cell | 4.28e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 5.71e-09 | 148 |
mesenchyme | 1.83e-07 | 160 |
entire embryonic mesenchyme | 1.83e-07 | 160 |