FFCP PHASE1:Hg19::chr2:233251572..233251582,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:233251572..233251582,+ | |||
|id=chr2:233251572..233251582,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.44e-20!3;CL:0002577!1.44e-20!3;CL:0002541!5.25e-10!3;CL:0000039!7.32e-09!7;CL:0000586!7.32e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.07e-33;3!CL:0000349;2.86e-21;19!CL:1000415;1.14e-13;2!CL:0002577;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.50e-33,3;CL:0000349,2.86e-21,19;CL:1000415,8.28e-14,2;CL:0002577,1.30e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.45e-26;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!4.27e-34!7;UBERON:0005631!1.18e-29!14;UBERON:0000158!1.18e-29!14;UBERON:0001987!4.45e-27!4;UBERON:0004340!4.45e-27!4;UBERON:0000478!8.08e-17!24;UBERON:0000476!5.25e-10!3;UBERON:0000920!5.25e-10!3;UBERON:0004923!4.25e-08!57;UBERON:0002171!7.45e-08!1;UBERON:0006518!7.45e-08!1;UBERON:0008949!7.45e-08!1;UBERON:0000101!7.45e-08!1;UBERON:0002167!7.45e-08!1;UBERON:0000995!1.07e-07!21;UBERON:0000473!1.34e-07!8;UBERON:0003133!1.70e-07!48;UBERON:0005156!1.91e-07!59;UBERON:0000990!1.91e-07!59;UBERON:0005795!2.47e-07!22;UBERON:0003975!2.47e-07!22;UBERON:0002048!3.98e-07!22;UBERON:0000117!3.98e-07!22;UBERON:0000171!3.98e-07!22;UBERON:0000170!3.98e-07!22;UBERON:0005597!3.98e-07!22;UBERON:0000118!3.98e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.07e-33;3!UBERON:0000920;1.07e-33;3!UBERON:0000478;4.82e-26;24!UBERON:0001987;8.65e-26;4!UBERON:0005631;5.74e-23;10!UBERON:0000158;5.74e-23;10!UBERON:0002110;1.47e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.63e-56,7;UBERON:0005631,2.80e-44,14;UBERON:0000158,2.80e-44,14;UBERON:0000920,1.50e-33,3;UBERON:0000478,4.95e-26,24;UBERON:0001987,7.64e-26,4;UBERON:0004340,7.64e-26,4;UBERON:0004923,1.17e-09,66;UBERON:0002110,1.19e-09,3;UBERON:0006242,1.19e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984043937099117,0,0.515205058238611,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,2.67268212749375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0.23056390438806,0,1.3037684630641,0,1.28236630762607,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12885688390333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr2:233251572..233251582,+ | |||
}} |
Revision as of 09:13, 21 January 2014
Short description: | p@chr2:233251572..233251582, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:233251572..233251582, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.50e-33 | 3 |
extraembryonic cell | 2.86e-21 | 19 |
epithelial cell of gall bladder | 8.28e-14 | 2 |
placental epithelial cell | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
chorion | 1.63e-56 | 7 |
extraembryonic membrane | 2.80e-44 | 14 |
membranous layer | 2.80e-44 | 14 |
egg chorion | 1.50e-33 | 3 |
extraembryonic structure | 4.95e-26 | 24 |
placenta | 7.64e-26 | 4 |
allantois | 7.64e-26 | 4 |
organ component layer | 1.17e-09 | 66 |
gallbladder | 1.19e-09 | 3 |
gall bladder primordium | 1.19e-09 | 3 |