FFCP PHASE1:Hg19::chr20:25217145..25217149,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr20:25217145..25217149,+ | |||
|id=chr20:25217145..25217149,+ | |||
|ontology_enrichment_celltype=CL:0002178!2.24e-09!3;CL:0000039!1.74e-08!7;CL:0000586!1.74e-08!7;CL:0000083!2.43e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002577;2.45e-12;3!CL:0002178;2.45e-12;3!CL:0000083;1.38e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.85e-12,3;CL:0002178,3.24e-12,3;CL:0000083,1.44e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4074!7.57e-14!2;DOID:4905!7.57e-14!2;DOID:3498!7.57e-14!2;DOID:6193!9.71e-08!1;DOID:1793!2.43e-07!4;DOID:3371!4.90e-07!1;DOID:4549!4.90e-07!1;DOID:5861!4.90e-07!1;DOID:6496!4.90e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4074;8.34e-18;2!DOID:4905;8.34e-18;2!DOID:3493;8.34e-18;2!DOID:3498;8.34e-18;2!DOID:4556;2.45e-12;3!DOID:1793;1.38e-09;4!DOID:3908;6.33e-08;5!DOID:170;8.25e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,9.07e-18,2;DOID:4905,9.07e-18,2;DOID:3498,9.07e-18,2;DOID:3493,1.27e-17,2;DOID:4556,2.31e-12,3;DOID:1793,1.44e-09,4;DOID:3908,6.13e-08,5;DOID:170,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001264!1.49e-22!10;UBERON:0003922!1.49e-22!10;UBERON:0003923!1.49e-22!10;UBERON:0003924!1.49e-22!10;UBERON:0003921!1.49e-22!10;UBERON:0001045!1.87e-20!11;UBERON:0002114!3.18e-17!12;UBERON:0002075!2.61e-16!18;UBERON:0002108!7.47e-15!14;UBERON:0005409!1.12e-12!35;UBERON:0000464!6.43e-12!104;UBERON:0002323!8.35e-12!46;UBERON:0004458!5.67e-11!49;UBERON:0002553!1.99e-10!70;UBERON:0003886!6.67e-10!63;UBERON:0001041!1.29e-09!98;UBERON:0000466!2.88e-09!126;UBERON:0000077!9.81e-08!130;UBERON:0000160!1.11e-07!27;UBERON:0000473!1.76e-07!8;UBERON:0000945!2.02e-07!8;UBERON:0010039!2.02e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;2.64e-30;10!UBERON:0002075;3.04e-17;18!UBERON:0001987;1.38e-09;4!UBERON:0000945;6.33e-08;5!UBERON:0010039;6.33e-08;5!UBERON:0000949;2.24e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.78e-30,10;UBERON:0002075,3.12e-17,18;UBERON:0001987,1.12e-09,4;UBERON:0004340,1.12e-09,4;UBERON:0000949,2.44e-07,45;UBERON:0002323,3.40e-07,46;UBERON:0004458,8.57e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,1.21390189767046,0,0,0,0,0,0,0.664653872707185,0.661983911750998,1.56966459203613,1.19472429772959,0,0,0,0,0,0,0.859930162358083,0,0,0,0.193978032976839,0.0882561266915003,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43429871466276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,1.07965256976767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0.275684698604535,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:25217145..25217149,+ | |||
}} |
Revision as of 10:37, 21 January 2014
Short description: | p@chr20:25217145..25217149, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:25217145..25217149, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.85e-12 | 3 |
epithelial cell of stomach | 3.24e-12 | 3 |
epithelial cell of pancreas | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
pancreas | 2.78e-30 | 10 |
viscus | 3.12e-17 | 18 |
placenta | 1.12e-09 | 4 |
allantois | 1.12e-09 | 4 |
endocrine system | 2.44e-07 | 45 |
body cavity | 3.40e-07 | 46 |
body cavity or lining | 8.57e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 9.07e-18 | 2 |
pancreatic carcinoma | 9.07e-18 | 2 |
pancreatic ductal adenocarcinoma | 9.07e-18 | 2 |
signet ring cell adenocarcinoma | 1.27e-17 | 2 |
lung large cell carcinoma | 2.31e-12 | 3 |
pancreatic cancer | 1.44e-09 | 4 |
non-small cell lung carcinoma | 6.13e-08 | 5 |
endocrine gland cancer | 8.48e-07 | 6 |