FFCP PHASE1:Hg19::chr20:49367619..49367632,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr20:49367619..49367632,+ | |||
|id=chr20:49367619..49367632,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.58e-14!254 | |||
|ontology_enrichment_celltype_v019=CL:0002563;8.96e-23;4!CL:0002253;2.90e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.18e-23,4;CL:0002253,2.32e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0009847;9.31e-09;3!UBERON:0003353;9.31e-09;3 | |||
|ontology_enrichment_disease=DOID:0050687!3.63e-33!143;DOID:305!1.67e-32!106;DOID:162!1.94e-23!235;DOID:14566!2.64e-23!239;DOID:7!2.75e-12!39;DOID:299!1.46e-09!25;DOID:1749!1.83e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:4468;8.74e-45;2!DOID:299;1.58e-14;25!DOID:4556;1.30e-08;3!DOID:5093;7.07e-07;4!DOID:1612;7.07e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.91e-44,2;DOID:299,1.70e-14,25;DOID:305,4.73e-10,106;DOID:0050687,1.15e-09,143;DOID:4556,1.40e-08,3;DOID:5093,7.27e-07,4;DOID:1612,7.27e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005911!6.61e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;8.96e-23;4!UBERON:0001262;8.96e-23;4!UBERON:0004786;8.96e-23;4!UBERON:0004808;8.96e-23;4!UBERON:0001277;8.96e-23;4!UBERON:0000485;1.80e-13;7!UBERON:0003929;1.80e-13;7!UBERON:0003350;6.51e-12;8!UBERON:0002346;7.07e-07;4!UBERON:0000923;7.07e-07;4!UBERON:0010316;7.07e-07;4!UBERON:0005291;7.07e-07;4!UBERON:0001052;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,7.18e-23,4;UBERON:0001262,7.18e-23,4;UBERON:0004786,7.18e-23,4;UBERON:0004808,7.18e-23,4;UBERON:0001277,7.18e-23,4;UBERON:0003350,5.83e-12,8;UBERON:0000485,9.69e-11,9;UBERON:0001052,8.14e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0,0.306806047506464,0,0,0.0898683511473268,0.716084698702437,0,0,0,0,0,0,0,2.3438498497671,0.174919999992391,0,0.227586896570999,0,0.709163045303809,0,0.583209226766509,0,0,0,0,0,0,0,0.32681539055697,0,0.0769502585037971,0.455768223388005,0.69169171316418,0.359030577639089,0.760531603454056,0,0,0,0,0.156980256395025,0,0,0,0,0,0,1.05499032264014,2.28525931422807,1.97894300007517,0,0,0,0.611030144933625,0,0.123563938946503,0.313265848516366,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0.173559738335131,0,0.261177619741208,0.17472666824203,0,0,0.292357268344742,0.164230914106418,0.0969890164884194,0,0,0,0,0,0.195551382734803,0.240476460754601,0,0.19980960958213,0,0,0.171594997861965,0.288109595976299,0,0,0,0,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0,0,0.399358000997982,0,0,0,0,0,0.157566364614447,0.247247575143499,0.0674035438541849,0.492137407573744,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0.157611414598396,0,1.05600336519407,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.38582807654183,0.168942440653073,0.76872455576384,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0.172214979660816,0,0,0,0.622077260032973,0,0,0.157265941855896,0.109209638192014,0,0,2.97445834221605,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0.346576998451015,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0.546974809018219,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,2.48207065856333,0.111231401892069,0,0,0,0,0.863710364874486,1.9110067515482,0,0.47404083519818,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0.9164274741762,0,0,0.559277158988962,0.196300467230486,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0.882655033580851,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0.126698501011437,0.101988829741982,0,0.275684698604535,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0.190941474834495,0,0,0,0,0.0717222053926763,0,0,0.213454691755431,0,0.449126010532934,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr20:49367619..49367632,+ | |||
}} |
Revision as of 12:05, 21 January 2014
Short description: | p@chr20:49367619..49367632, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:49367619..49367632, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.18e-23 | 4 |
epithelial cell of large intestine | 2.32e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 7.18e-23 | 4 |
wall of intestine | 7.18e-23 | 4 |
gastrointestinal system mucosa | 7.18e-23 | 4 |
gastrointestinal system epithelium | 7.18e-23 | 4 |
intestinal epithelium | 7.18e-23 | 4 |
epithelium of mucosa | 5.83e-12 | 8 |
simple columnar epithelium | 9.69e-11 | 9 |
rectum | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.91e-44 | 2 |
adenocarcinoma | 1.70e-14 | 25 |
carcinoma | 4.73e-10 | 106 |
cell type cancer | 1.15e-09 | 143 |
lung large cell carcinoma | 1.40e-08 | 3 |
thoracic cancer | 7.27e-07 | 4 |
breast cancer | 7.27e-07 | 4 |