FFCP PHASE1:Hg19::chr20:56285010..56285034,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56937 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14107 | |||
|TSSclassifier=strong | |||
|UniProt=Q969W9 | |||
|association_with_transcript=0bp_to_NM_020182,uc002xyq.2_5end | |||
|coexpression_cluster_id=C4053 | |||
|description=CAGE_peak_2_at_PMEPA1_5end | |||
|id=chr20:56285010..56285034,- | |||
|ontology_enrichment_celltype=CL:0000066!1.23e-11!254;CL:0002076!4.41e-08!43;CL:0002368!1.20e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;5.78e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.28e-11,253;CL:0002076,8.00e-09,42;CL:0002368,6.64e-08,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!1.25e-10!612;UBERON:0002050!2.32e-10!605;UBERON:0005423!2.32e-10!605;UBERON:0000923!4.97e-10!604;UBERON:0005291!4.97e-10!604;UBERON:0006598!4.97e-10!604;UBERON:0002532!4.97e-10!604;UBERON:0000468!5.64e-10!659;UBERON:0000467!3.14e-09!625;UBERON:0000062!4.04e-09!511;UBERON:0000480!4.73e-09!626;UBERON:0000064!5.81e-08!219;UBERON:0004121!3.58e-07!169;UBERON:0000924!4.88e-07!173;UBERON:0006601!4.88e-07!173 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,2.34e-08,592;UBERON:0005423,3.34e-07,581;UBERON:0004121,9.15e-07,171;UBERON:0000924,9.15e-07,171;UBERON:0006601,9.15e-07,171 | |||
|phase1_expression=3.81524596468169,4.06790995392868,2.39622486963151,2.00146596706261,5.36353313312745,3.48935409640147,2.53299878168311,1.26343974685366,1.56711376919903,18.6757791741147,31.4010525587592,8.08233076881637,13.7158828678796,0,1.32558950291166,0.672325146451775,0,0.730310090387373,0.487932798790507,4.92484232307152,5.50801866359483,12.2247341376454,12.0219114595044,11.2237028559765,19.710194416384,0.0764134057479513,0,0,2.36018566109342,4.22212337906934,6.65709330259127,11.0330546937471,18.6747669642515,6.65557218300218,0.232401601740905,0,0.293600439334847,8.30993112797816,6.61796676651468,4.55722828503289,0,0.647787332037959,0,2.76256653681173,12.4699061417307,6.79235371325885,4.41615170120801,13.5685403047203,8.981484755958,1.43846196161075,9.99026755463492,2.60130452877444,1.37898272294647,10.973239620925,4.06279459783025,8.47090527941721,20.4679612543384,8.09004544002305,22.038040250705,22.4650318953266,14.7047538933779,0.989553900560148,5.38551875578406,2.55734850319616,13.930043454172,28.369261234557,19.3074897188628,2.76373531782418,8.34372669472322,3.9093992046921,4.84319602106695,12.1531619875896,8.22802207346299,0,0,0,0.336985893439485,0.150176892841506,0.16072558669708,0,0.19891667719909,0.182664153764634,3.51992488922645,4.91524750135918,2.66852776159066,1.70692089026603,3.2031678962881,4.02326707968138,2.64417949113945,1.90810750907073,14.2303242277362,14.6809297342735,26.759125968766,7.93027971474155,12.3311883855938,0,2.360517241366,3.53709686474248,3.49522548299166,0,5.21475626613745,0.946895611469467,0,0,1.17842362989935,0,0,0,0,0,0,0,1.63115219478266,1.07016331235885,1.04535523804977,0,1.91610246800961,2.74901956386104,0.759059076058509,0,0,0,0,0,0,0,0,8.46748321543876,4.81392352410313,2.75166367377318,0,1.34140171940727,0.767175371061182,1.44575660953827,3.50936537445123,2.75208386025565,12.7245751528176,39.9040593648161,12.1004565970007,13.3037638477538,10.0131655690164,3.86388272718252,5.46442932438813,1.48313777113772,0,0,0.930705723632056,27.903403043725,13.1558829479429,25.2591100904104,3.7764857399674,0.860234595106124,4.51282652089873,3.39184765154406,5.87299210693868,9.62913146790236,4.38889429727302,1.29208379584664,0.71153252537342,0.33472061276467,0.402829317109147,0.760272105718513,0.488124115096339,1.83831540172934,21.0636906449257,0.625098097988558,1.34717623575702,0.675668882899933,13.7984973719295,5.69559395740877,3.84723662253855,3.9534125230819,0,4.79703457356788,3.47880366186723,2.5326102332916,0.132409180813219,1.14734648299525,2.83734705758686,1.12135520028461,8.5399196583764,15.7867230986982,0,1.48181739276657,0.653847612453835,1.36221684880438,11.5235184896,0,0.312160076830321,1.1409436430889,0.448346041655403,0.469737994575059,0.971237666208789,0.702254033511242,0.204154171254893,0.245668634623536,0.516628905878827,3.56400857184616,4.94533858557114,0,0,0.673344455816265,0.500474079487857,0.554128230968366,3.07284334616587,2.14541457059314,3.30523729594513,1.47461838108027,0.538168907066586,0.85422955527427,0.423863802319124,1.20036438433761,1.54578793857658,0.257640540045629,2.60563598864226,1.68776332241266,1.36411807225678,1.00973509697646,0.644349290496095,0.323292113637624,0,1.0075209822764,1.3564847384839,14.6878248404106,12.8190676677692,14.6270343648392,1.21973706129595,0.530119073285941,1.85910308591229,1.0366105501537,3.28017106138317,2.55484151353081,3.12899064659632,3.21620469096443,4.14404764057442,0,0.721879481669586,2.24782920075703,2.69735504124963,3.61516544825223,2.64705534557745,4.79334777003293,4.98268300133303,3.64044532032444,1.37355025587742,1.92373578473195,0,7.01208869017229,2.4694440679884,1.47008711385542,0,0.982827216677626,1.18157981336281,3.97316789473185,0.983907508344908,4.97546649865724,21.401305654682,6.74410519545717,12.4655925790422,2.68506490959736,0.325808305310325,1.03993478527958,5.77325368101093,13.9116485970092,6.22266079449855,0.721832238805369,0,0.190254152234598,15.8040879591855,11.1603201072333,0,0.234004265139238,1.0404181360211,8.43604505880993,18.6460162300734,8.79005602902796,8.68717670217628,5.52204483176528,17.6356032415997,0.985326475791887,2.46535615237033,2.28060927094849,0.576479813667846,2.65109110195398,1.20645999155121,3.4378958300245,2.34434894420094,6.84289784090821,3.29047976650635,0.901029173531752,0.285826432630578,1.00917975910825,0.87192013766656,1.54010400223995,4.52451005152222,0,1.690605505112,1.32969058292435,0,0.257207374262142,0,0.266422179016099,0.714889968290738,1.08524321078289,0.823240336780769,0,0.710783897485092,1.58390374586686,2.41151501647669,4.35766729300147,6.59821741801577,0,0,0,1.91699884393266,2.29723871668228,1.42636905040718,1.15825045334063,0.205476322550383,2.50685348535854,0,5.31983052545203,4.9594342217689,4.10697716095195,4.57370323600434,2.60279707715243,4.63973287666617,6.5331343480396,5.10351001322531,0,0,0.828831026872071,0.49076596687656,0.500170521059677,0,0.623912584592421,0.892144943985809,0.946214490203608,0.937131319941706,0.601892199455438,11.37037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| |||
|short_description=p2@PMEPA1 | |||
}} |
Revision as of 12:24, 21 January 2014
Short description: | p2@PMEPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PMEPA1_5end |
Coexpression cluster: | C4053_papillotubular_Urothelial_mature_Chondrocyte_Prostate_Small_bile |
Association with transcript: | 0bp_to_NM_020182, uc002xyq.2_5end |
EntrezGene: | PMEPA1 |
HGNC: | 14107 |
UniProt: | Q969W9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.28e-11 | 253 |
endo-epithelial cell | 8.00e-09 | 42 |
respiratory epithelial cell | 6.64e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
embryo | 2.34e-08 | 592 |
developing anatomical structure | 3.34e-07 | 581 |
ectoderm-derived structure | 9.15e-07 | 171 |
ectoderm | 9.15e-07 | 171 |
presumptive ectoderm | 9.15e-07 | 171 |