FFCP PHASE1:Hg19::chr21:40720538..40720557,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3150 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4984 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000471260,ENST00000482192_5end | |||
|description=CAGE_peak_5_at_HMGN1_5end | |||
|id=chr21:40720538..40720557,- | |||
|ontology_enrichment_celltype=CL:0000012!4.30e-12!682;CL:0000548!2.17e-11!679;CL:0000004!2.17e-11!679;CL:0000255!2.17e-11!679;CL:0002319!2.13e-10!25;CL:0000144!2.02e-09!625;CL:0000133!3.06e-08!59;CL:0002321!3.87e-08!248;CL:0000220!1.25e-07!246;CL:0002139!2.83e-07!24;CL:0000115!8.66e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.30e-10;25!CL:0002139;1.80e-07;24!CL:0002321;2.71e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.58e-10,25;CL:0000133,1.35e-08,59;CL:0002321,4.79e-08,250;CL:0002139,2.12e-07,24;CL:0000115,2.64e-07,36;CL:0000333,9.18e-07,41;CL:0002078,9.24e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!3.91e-10!51;DOID:0060083!3.91e-10!51;DOID:162!1.41e-09!235;DOID:14566!2.90e-09!239;DOID:1240!4.26e-09!39;DOID:0050686!8.75e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.36e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.17e-10,51;DOID:0060083,2.17e-10,51;DOID:1240,2.07e-09,39;DOID:162,3.97e-09,235;DOID:14566,9.48e-09,239;DOID:0050686,1.13e-08,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p5@HMGN1 | |||
}} |
Revision as of 13:49, 21 January 2014
Short description: | p5@HMGN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HMGN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000471260, ENST00000482192_5end |
EntrezGene: | HMGN1 |
HGNC: | 4984 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.58e-10 | 25 |
neurectodermal cell | 1.35e-08 | 59 |
embryonic cell | 4.79e-08 | 250 |
endothelial cell of vascular tree | 2.12e-07 | 24 |
endothelial cell | 2.64e-07 | 36 |
migratory neural crest cell | 9.18e-07 | 41 |
meso-epithelial cell | 9.24e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.17e-10 | 51 |
immune system cancer | 2.17e-10 | 51 |
leukemia | 2.07e-09 | 39 |
cancer | 3.97e-09 | 235 |
disease of cellular proliferation | 9.48e-09 | 239 |
organ system cancer | 1.13e-08 | 137 |