FFCP PHASE1:Hg19::chr21:44495919..44495953,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=875 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1550 | |||
|TSSclassifier=strong | |||
|UniProt=P35520 | |||
|association_with_transcript=0bp_to_ENST00000398158_5end | |||
|description=CAGE_peak_1_at_CBS_5end | |||
|id=chr21:44495919..44495953,- | |||
|ontology_enrichment_celltype=CL:0000055!9.54e-18!180;CL:0002321!3.55e-11!248;CL:0000220!1.72e-10!246;CL:0000133!1.59e-09!59;CL:0000057!6.34e-09!75;CL:0000066!1.30e-08!254;CL:0000221!2.18e-08!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.26e-11,250;CL:0000133,1.89e-09,59;CL:0000057,3.16e-09,76;CL:0000066,3.21e-08,253;CL:0000221,5.82e-08,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!9.41e-08!22;DOID:2994!9.41e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;8.43e-08;22!DOID:2994;8.43e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.78e-08,22;DOID:2994,8.78e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000119!3.84e-14!312;UBERON:0000483!7.44e-14!309;UBERON:0000475!6.46e-12!365;UBERON:0000468!1.50e-09!659;UBERON:0000025!2.78e-08!194;UBERON:0000481!1.83e-07!347;UBERON:0002100!4.15e-07!216;UBERON:0000922!5.45e-07!612;UBERON:0003914!7.75e-07!118 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.82e-14,309;UBERON:0000483,3.56e-14,306;UBERON:0000025,2.96e-08,192;UBERON:0002100,2.67e-07,199 | |||
|phase1_expression=51.7783380921086,27.1907665341549,64.8390258841467,39.0285863577209,73.3016194860752,40.9999106327173,25.3299878168311,39.1666321524635,16.4546945765898,28.7508705706765,71.87352030116,27.7420542605319,29.0143676051299,5.19818682432196,3.97676850873499,12.7741777825837,14.4646686725754,14.6062018077475,7.3189919818576,22.4080325699754,23.0520781106006,70.2138576110917,46.6564659023622,48.0429232005824,67.4163974624091,0.0764134057479513,0,0,0,0,0.309632246632152,10.1136334692682,8.433765725791,41.0426951285134,0,27.1543234050975,0,0.553995408531877,0,0,19.7045617331133,7.77344798445551,7.7272670290256,0.436194716338694,0,0.727752183563449,0.232429036905685,0,1.85823822537062,0,0.512321413058201,0.236482229888585,0.344745680736619,0,1.35426486594342,0.188242339542605,0.545812300115692,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.398927315243264,0.852449501065388,0,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0.434377689410233,1.21079900526674,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0,0,12.1903433156981,18.1089232119982,67.3835700915405,20.9634708383048,44.6190740465942,38.0946344866966,7.15757352345989,14.5990461090791,14.2747573917742,13.9689520401415,13.965730925207,7.26933869012305,64.1159707394874,20.0223599103592,10.7100639906045,12.5373410855472,9.30705723632056,0,0,0,35.5784709186402,25.8070378531837,20.1341490932405,20.3510859092643,12.5849830862972,37.4160537038492,16.9285922894817,1.29208379584664,0.71153252537342,4.01664735317604,7.65375702507379,11.4040815857777,11.7149787623121,16.91250169591,27.5448262279798,18.1278448416682,13.0227036123178,22.5222960966644,21.4643292452237,28.4779697870439,33.7091208831949,2.63560834872127,0,30.9626777021199,48.7032512661412,37.356000941051,55.4794467607387,77.4458876021797,34.0481646910423,60.5531808153692,72.5893170961994,57.9668738780326,18.3614510885862,50.9206340423421,21.4135093078631,20.4332527320657,13.82822218752,112.474287280222,32.7768080671837,43.3558584373781,38.1094135407093,38.6359500537986,32.5364618179944,25.5620468198092,21.2320338105089,31.3227509145008,45.5666694985126,14.2560342873846,26.7048283620841,71.9027475931041,140.130537654166,31.3105171954563,29.6530892096555,13.2990775432408,19.7539929396377,32.4877063546961,21.4840424236433,29.9460963542456,29.4199002529734,45.0606090407177,42.1744483307528,32.4098383771154,27.9272354236169,68.5323836521374,35.3622027030021,40.6750960701452,42.2876602399602,52.0013574942876,43.1714024632384,31.3593350228495,23.7856426986132,13.9037895554144,20.177710484948,0.773043412653187,1.36373060295417,0.860413786167011,183.570427725041,219.866885645344,144.312877043942,79.3007070867584,129.440596499197,116.792754904266,4.69348596989448,36.0214925388016,9.66944449467364,6.03678306441573,6.49691533502627,9.34623720314767,12.1380976856233,10.3634742849897,11.8014550823662,11.7654899809899,8.30447166888838,10.651673344653,10.0072947213927,12.6966561792309,3.69077727312324,47.6822030931716,53.0930474617506,45.572700529518,294.071680786648,188.702825602104,153.605375737165,3.09024169590255,17.341369834579,18.1861878916437,22.9378096504027,80.9292623454861,24.227482351203,6.48119116109707,55.3874119027552,71.7555001842909,25.9796415645492,12.8682749522335,41.2104516767734,3.17606185074362,3.70388410061289,3.23432058798817,17.3844967551041,31.7639879975103,9.1100292252337,4.91408956792399,3.71577905721821,0.93733833986777,1.6798212819886,1.98485136139341,36.8085528308706,25.8664205277426,40.2551813123472,0,0.704387472105808,0,0,0.12624243342638,4.38135470615966,32.0870277468953,32.8208852188132,22.2394179829517,16.3495713398284,0.901029173531752,9.71809870943966,28.8176886767577,39.6723662638285,14.66765716419,41.7547641897622,96.5672403800083,17.751357803676,68.8779721954815,59.2842390394787,33.6941660283406,19.858878483259,35.7005719881573,71.3460188354156,57.517890171493,49.3944202068461,18.8926986890366,65.747510517371,46.7251605030723,5.42590878707255,16.5591357134056,8.49770425047485,0,3.01354254859276,2.10833939483032,51.7589687861819,44.7961549753044,1.42636905040718,11.1481606134036,0.821905290201534,0.537182889719687,0.112085143993527,0,0,0,28.7126925371384,33.8363620029816,23.1986643833309,36.1835133122193,33.1728150859645,0,2.99161459204025,6.21623270154053,4.2942022101699,8.00272833695483,30.1104176306706,49.2890941828013,48.3542559640308,55.3535476769111,43.5766063772893,55.3740823499003,54.5778009734364,68.2922270530533,30.5543775326301,42.0361704275083,13.7276110859571,25.0625481552308,23.6768962429491,0,0,0,6.06255142892519,46.6019230629392,52.918301332694,45.8999444464737,63.5332569412579,46.8702357703233,49.8461290604677,36.8429219328026,51.634108687098,41.5570586045975,13.7246627484363,34.979659886686,13.7152350543061,16.0968873046923,6.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| |||
|short_description=p1@CBS | |||
}} |
Revision as of 14:01, 21 January 2014
Short description: | p1@CBS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CBS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000398158_5end |
EntrezGene: | CBS |
HGNC: | 1550 |
UniProt: | P35520 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.26e-11 | 250 |
neurectodermal cell | 1.89e-09 | 59 |
fibroblast | 3.16e-09 | 76 |
epithelial cell | 3.21e-08 | 253 |
ectodermal cell | 5.82e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.82e-14 | 309 |
epithelium | 3.56e-14 | 306 |
tube | 2.96e-08 | 192 |
trunk | 2.67e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.78e-08 | 22 |
germ cell cancer | 8.78e-08 | 22 |