FFCP PHASE1:Hg19::chr3:191047018..191047047,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152137 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18111 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IVM0 | |||
|association_with_transcript=144bp_to_ENST00000392456,NM_174908,NM_178335,uc003fsv.2,uc003fsw.2_5end | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_3_at_CCDC50_5end | |||
|id=chr3:191047018..191047047,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.59e-12!119;CL:0000115!1.37e-10!35;CL:0002139!3.07e-10!24;CL:0002078!5.34e-10!44;CL:0000236!6.75e-09!14;CL:0000213!1.12e-08!57;CL:0000215!1.12e-08!57;CL:0000945!1.83e-08!24;CL:0000826!1.83e-08!24;CL:0000071!3.52e-08!18;CL:0002546!3.52e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.31e-10;24!CL:0000115;1.49e-09;36!CL:0000945;1.90e-08;24!CL:0000236;2.06e-08;13!CL:0000071;2.67e-08;18!CL:0002078;9.08e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.44e-12,121;CL:0000115,7.03e-11,36;CL:0002078,2.78e-10,45;CL:0002139,3.04e-10,24;CL:0000213,6.31e-09,58;CL:0000215,6.31e-09,58;CL:0000236,6.69e-09,14;CL:0000945,2.26e-08,24;CL:0000826,2.26e-08,24;CL:0000071,3.48e-08,18;CL:0002546,3.48e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002546;2.67e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.70e-18!110;UBERON:0001009!9.44e-18!113;UBERON:0002049!4.87e-17!79;UBERON:0007798!4.87e-17!79;UBERON:0004872!1.36e-15!84;UBERON:0000055!4.21e-15!69;UBERON:0001981!6.44e-15!60;UBERON:0007500!6.44e-15!60;UBERON:0004537!6.44e-15!60;UBERON:0006965!6.44e-15!60;UBERON:0003914!1.50e-11!118;UBERON:0001637!1.05e-09!42;UBERON:0003509!1.05e-09!42;UBERON:0004572!1.05e-09!42;UBERON:0001986!3.52e-08!18;UBERON:0004638!3.52e-08!18;UBERON:0004852!3.52e-08!18;UBERON:0000119!8.18e-08!312;UBERON:0000483!2.72e-07!309;UBERON:0004573!6.31e-07!33;UBERON:0004571!6.31e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.67e-08;18!UBERON:0001986;2.67e-08;18!UBERON:0004852;2.67e-08;18!UBERON:0007500;5.69e-08;56!UBERON:0001981;5.69e-08;56!UBERON:0004537;5.69e-08;56!UBERON:0000055;9.82e-08;65!UBERON:0002049;2.00e-07;75!UBERON:0007798;2.00e-07;75!UBERON:0001637;2.54e-07;42!UBERON:0003509;2.54e-07;42!UBERON:0004572;2.54e-07;42!UBERON:0003914;3.85e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,8.65e-18,109;UBERON:0001009,2.18e-17,112;UBERON:0002049,1.18e-16,78;UBERON:0007798,1.18e-16,78;UBERON:0004872,3.48e-15,83;UBERON:0000055,1.01e-14,68;UBERON:0007500,1.73e-14,59;UBERON:0001981,1.73e-14,59;UBERON:0004537,1.73e-14,59;UBERON:0006965,1.73e-14,59;UBERON:0003914,5.87e-12,117;UBERON:0001637,1.11e-09,42;UBERON:0003509,1.11e-09,42;UBERON:0004572,1.11e-09,42;UBERON:0004638,3.48e-08,18;UBERON:0001986,3.48e-08,18;UBERON:0004852,3.48e-08,18;UBERON:0000119,5.21e-07,309;UBERON:0004573,6.64e-07,33;UBERON:0004571,6.64e-07,33 | |||
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| |||
|short_description=p3@CCDC50 | |||
}} |
Revision as of 23:19, 21 January 2014
Short description: | p3@CCDC50 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC50_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 144bp_to_ENST00000392456, NM_174908, NM_178335, uc003fsv.2, uc003fsw.2_5end |
EntrezGene: | CCDC50 |
HGNC: | 18111 |
UniProt: | Q8IVM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.44e-12 | 121 |
endothelial cell | 7.03e-11 | 36 |
meso-epithelial cell | 2.78e-10 | 45 |
endothelial cell of vascular tree | 3.04e-10 | 24 |
lining cell | 6.31e-09 | 58 |
barrier cell | 6.31e-09 | 58 |
B cell | 6.69e-09 | 14 |
lymphocyte of B lineage | 2.26e-08 | 24 |
pro-B cell | 2.26e-08 | 24 |
blood vessel endothelial cell | 3.48e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.48e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 8.65e-18 | 109 |
circulatory system | 2.18e-17 | 112 |
vasculature | 1.18e-16 | 78 |
vascular system | 1.18e-16 | 78 |
splanchnic layer of lateral plate mesoderm | 3.48e-15 | 83 |
vessel | 1.01e-14 | 68 |
epithelial tube open at both ends | 1.73e-14 | 59 |
blood vessel | 1.73e-14 | 59 |
blood vasculature | 1.73e-14 | 59 |
vascular cord | 1.73e-14 | 59 |
epithelial tube | 5.87e-12 | 117 |
artery | 1.11e-09 | 42 |
arterial blood vessel | 1.11e-09 | 42 |
arterial system | 1.11e-09 | 42 |
blood vessel endothelium | 3.48e-08 | 18 |
endothelium | 3.48e-08 | 18 |
cardiovascular system endothelium | 3.48e-08 | 18 |
cell layer | 5.21e-07 | 309 |
systemic artery | 6.64e-07 | 33 |
systemic arterial system | 6.64e-07 | 33 |