FFCP PHASE1:Hg19::chr4:4861385..4861398,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4487 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7391 | |||
|TSSclassifier=strong | |||
|UniProt=P28360 | |||
|association_with_transcript=0bp_to_ENST00000382723,NM_002448,uc003gif.2_5end | |||
|description=CAGE_peak_1_at_MSX1_5end | |||
|id=chr4:4861385..4861398,+ | |||
|ontology_enrichment_celltype=CL:0000057!3.80e-16!75;CL:0000055!7.36e-14!180;CL:0002620!1.60e-07!23;CL:0000136!2.62e-07!15;CL:0002334!9.85e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000057;6.33e-08;73!CL:0002620;1.03e-07;23!CL:0002334;5.48e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.28e-16,76;CL:0000136,1.30e-07,15;CL:0002620,1.36e-07,23;CL:0002334,5.24e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.04e-12!365;UBERON:0000477!3.32e-10!286;UBERON:0004111!2.45e-08!241;UBERON:0003102!7.67e-08!95;UBERON:0002346!3.62e-07!90;UBERON:0002199!3.80e-07!45;UBERON:0002416!3.80e-07!45;UBERON:0000055!5.23e-07!69;UBERON:0000955!7.84e-07!69;UBERON:0006238!7.84e-07!69;UBERON:0000025!8.17e-07!194;UBERON:0002049!9.92e-07!79;UBERON:0007798!9.92e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.84e-10,132;UBERON:0004111,1.27e-07,240;UBERON:0002199,5.39e-07,46;UBERON:0002416,5.39e-07,46;UBERON:0000055,6.28e-07,68;UBERON:0003102,8.95e-07,99 | |||
|phase1_expression=41.6043488529575,27.8330681058278,14.518303621885,64.0469109460035,2.68176656656373,4.36169262050184,5.06599756336621,16.4247167090976,14.626395179191,1.72013755551056,0,0.218441372130172,0.263766978228454,0,0,8.0679017574213,6.02694528023977,10.2243412654232,5.85519358548608,12.188984749602,9.9960338709684,7.20945859399602,0,0.410623275218653,1.25542639594803,3.51501666440576,3.61242593579761,2.75487734597877,0,0,0.619264493264304,0,0,0.369754010166788,0,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,1.35426486594342,0.188242339542605,0.545812300115692,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0,0.426224750532694,0.580418477257168,0,0.622822248995575,0,0.521482918420201,0.217188844705117,1.21079900526674,1.10483290796269,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0.589211814949674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.40648818027883,16.2647618573055,6.01605492763067,6.37324683427624,10.3387173116643,7.78615792484217,0.661743720148475,0,0.263504357079378,6.67993285038334,0,0,0,0,0,0,0,0,2.58391129576717,3.4409383804245,3.81854551768354,0.56530794192401,3.77549492588915,4.12677062910101,3.34391946458897,3.87625138753993,1.42306505074684,3.68192674041137,11.6820501961653,6.0821768457481,9.76248230192678,3.30896772311282,4.86085168729056,1.3394959242612,0.44905874525234,1.80178368773316,0,2.84779697870439,0.916008719652036,0,0,0,1.49091585508596,5.06522046658319,2.1185468930115,4.58938593198102,6.38403087957043,0.560677600142307,7.47242970107935,2.96001058100592,2.48968828319813,5.25371621071783,1.79808093424805,184.353346871526,67.9887590886399,6.09235722767871,2.18512053781224,7.41613368007784,7.62188270814185,10.2168013820075,11.1692331614011,14.1855314769271,21.4361879817638,87.2123652913553,38.5405163785605,121.176291442769,122.644396922164,1.82032272387605,1.43723628363248,72.0478567723403,70.4417266879158,12.4678851967882,72.4313074453383,54.5548276522255,75.8702197478314,1.36118619792025,10.0458195985763,15.3761319949369,15.6829606858076,8.10245959427886,14.1181965056661,5.92573242104947,10.422543954569,10.6329089311998,25.4310583470728,4.29137416214995,14.451834086841,5.65761198865842,6.03516307278244,16.2210878146501,9.15627198476633,0,0.272746120590835,0,0.731842236777572,0.662648841607426,9.52790331530051,9.64047811642945,4.79409616663694,0,18.7739438795779,14.1513006402435,33.1523811245953,2.3218396401599,0,2.36613600079688,2.36018566109342,1.20505514941741,1.65440959098591,1.52515610864684,2.13543557199987,2.29213223872279,2.35465758150415,2.30848294167834,7.38155454624648,7.01208869017229,1.2347220339942,0,0,0,1.77236972004421,0,6.27241036569879,5.31860211925429,0.109750285408626,0,0,0,5.86454949558584,1.03993478527958,1.44331342025273,12.056762117408,0.234817388471643,13.1373467462577,12.0376233269919,5.32711626256875,0,0.858486162094873,0.246217006087397,0,0,0,0.839910640994298,0,0.0895585227028483,0.290633938513962,0,0,0,2.07328115540772,0.432359860250884,0.6312121671319,0.825472625798197,1.52795370223311,0,3.4214489204541,0.102827492703324,0.600686115687835,0,266.759849657613,82.3964530094899,186.425922556855,1.42198887333556,10.7296933755565,17.751357803676,1.59562869950922,1.04007436911366,3.34369586540785,0,1.5985330740966,1.14382394926518,2.17048642156577,2.46972101034231,15.3096006618055,0.355391948742546,2.37585561880029,1.20575750823834,2.61460037580088,1.49959486773086,0,0,0,0,0,1.42636905040718,4.34343920002738,0.205476322550383,2.14873155887875,0,0,0,0,0.254094624222463,0,0,0.670065061337395,0,0,0,0,0.24538298343828,1.00034104211935,0.542530047399471,3.32753378449291,6.95873056308931,3.6271555457805,7.73133338951907,0.300946099727719,0,1.03473071292505,0.664225598535437,1.29058417979192,4.25729710893606,30.936582879113,25.3926133620033,0,0,0,0.909382714338778,0,0.907170879989041,30.7653681695283,38.6724172685917,47.4315559591894,13.8390281196157,52.7058466538705,7.23842645146234,8.90508398669946,18.813582643924,14.2049380250502,9.69100440962948,6.75030757938707,10.1103029260165,14.9865717493612,1.80455823272956,0,5.97035130455955,2.91345868810747,4.06485686374215,1.35359883872224,0.693138033939733,0,0,0,4.54933536283586,2.72149928442425,0.431831832204279,1.54227252690289,0,0,0.509752546090077,0.831076008928724,0,0,0,1.02580050046556,0.328014645699706,0.976135183992909,7.72807587357917,5.31102895946392,6.1882124940441,2.87132768998086,1.30012049207304,0,1.93341436584244,0.924291702687866,0.767518373630648,3.85942402956686,0.107420244868274,0.145016693914229,3.74997160630844,0.979352392114111,0.165284915360978,0,0.255225424989168,0.10115778085555,4.64845549297286,2.51849877464512,6.2733354314454,11.7052760466914,5.85536633348724,3.47973196830029,8.15426564057248,6.29749501664761,78.5254159348898,0,0,0.511795582622668,0.42793898803392,3.5002357271853,2.35484592059769,1.0792347454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| |||
|short_description=p1@MSX1 | |||
}} |
Revision as of 00:00, 22 January 2014
Short description: | p1@MSX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MSX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000382723, NM_002448, uc003gif.2_5end |
EntrezGene: | MSX1 |
HGNC: | 7391 |
UniProt: | P28360 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.28e-16 | 76 |
fat cell | 1.30e-07 | 15 |
skin fibroblast | 1.36e-07 | 23 |
preadipocyte | 5.24e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 4.84e-10 | 132 |
anatomical conduit | 1.27e-07 | 240 |
integument | 5.39e-07 | 46 |
integumental system | 5.39e-07 | 46 |
vessel | 6.28e-07 | 68 |
surface structure | 8.95e-07 | 99 |