FFCP PHASE1:Hg19::chr4:24208460..24208464,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C449 | |||
|description=CAGE_peak_at_chr4:24208460..24208464,- | |||
|id=chr4:24208460..24208464,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;1.72e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.64e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.35e-32!57;UBERON:0005068!1.35e-32!57;UBERON:0006241!1.35e-32!57;UBERON:0007135!1.35e-32!57;UBERON:0002616!3.15e-31!59;UBERON:0007023!5.66e-31!115;UBERON:0002020!6.90e-30!34;UBERON:0003528!6.90e-30!34;UBERON:0001869!1.67e-29!32;UBERON:0000955!3.05e-29!69;UBERON:0006238!3.05e-29!69;UBERON:0001893!1.73e-27!34;UBERON:0002780!1.06e-26!41;UBERON:0001890!1.06e-26!41;UBERON:0006240!1.06e-26!41;UBERON:0002346!4.90e-26!90;UBERON:0003080!6.23e-26!42;UBERON:0003075!8.98e-26!86;UBERON:0007284!8.98e-26!86;UBERON:0002791!2.35e-25!33;UBERON:0005743!2.54e-25!86;UBERON:0001017!4.27e-25!82;UBERON:0002619!2.37e-24!22;UBERON:0001950!1.99e-23!20;UBERON:0000073!4.05e-22!94;UBERON:0001016!4.05e-22!94;UBERON:0000956!4.53e-21!25;UBERON:0000203!4.53e-21!25;UBERON:0003056!8.37e-18!61;UBERON:0000153!3.62e-15!129;UBERON:0007811!3.62e-15!129;UBERON:0000033!3.75e-15!123;UBERON:0000025!1.17e-14!194;UBERON:0001871!2.18e-12!7;UBERON:0000369!9.67e-12!4;UBERON:0002435!9.67e-12!4;UBERON:0000204!9.67e-12!4;UBERON:0010082!9.67e-12!4;UBERON:0000924!1.32e-11!173;UBERON:0006601!1.32e-11!173;UBERON:0004121!3.48e-11!169;UBERON:0004111!2.03e-10!241;UBERON:0002308!2.64e-10!9;UBERON:0000125!2.64e-10!9;UBERON:0004733!4.46e-10!12;UBERON:0002028!4.46e-10!12;UBERON:0007277!4.46e-10!12;UBERON:0005383!2.50e-09!3;UBERON:0005382!2.50e-09!3;UBERON:0000483!2.73e-09!309;UBERON:0004732!3.22e-09!13;UBERON:0000119!4.33e-09!312;UBERON:0000481!4.33e-08!347;UBERON:0000988!6.82e-08!3;UBERON:0002298!7.57e-08!8;UBERON:0003076!7.60e-08!15;UBERON:0003057!7.60e-08!15;UBERON:0002420!9.24e-08!9;UBERON:0007245!9.24e-08!9;UBERON:0010009!9.24e-08!9;UBERON:0010011!9.24e-08!9;UBERON:0000454!9.24e-08!9;UBERON:0000477!9.79e-08!286;UBERON:0000200!1.18e-07!6;UBERON:0000064!1.78e-07!219;UBERON:0002680!3.57e-07!9;UBERON:0001895!3.57e-07!9;UBERON:0010092!3.57e-07!9;UBERON:0001873!9.10e-07!2;UBERON:0010122!9.10e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;1.84e-34;1!UBERON:0005056;1.84e-34;1!UBERON:0004176;1.84e-34;1!UBERON:0001950;7.18e-15;20!UBERON:0002619;1.20e-13;22!UBERON:0000956;3.64e-12;25!UBERON:0000203;3.64e-12;25!UBERON:0002791;1.38e-09;32!UBERON:0001869;1.38e-09;32!UBERON:0003528;9.72e-09;34!UBERON:0002020;9.72e-09;34!UBERON:0001893;5.35e-08;34!UBERON:0001872;6.55e-08;5!UBERON:0002021;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,1.84e-34,1;UBERON:0005056,1.84e-34,1;UBERON:0001950,8.28e-15,20;UBERON:0002619,1.36e-13,22;UBERON:0000956,4.09e-12,25;UBERON:0000203,4.09e-12,25;UBERON:0002791,1.05e-09,32;UBERON:0001869,1.05e-09,32;UBERON:0003528,3.43e-09,34;UBERON:0002020,3.43e-09,34;UBERON:0001893,3.43e-09,34;UBERON:0000955,4.40e-08,68;UBERON:0006238,4.40e-08,68;UBERON:0002021,6.55e-08,5;UBERON:0001872,7.49e-08,5;UBERON:0002780,8.93e-08,41;UBERON:0001890,8.93e-08,41;UBERON:0003080,8.93e-08,41;UBERON:0006240,8.93e-08,41;UBERON:0001017,6.85e-07,81 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,1.47787785689595,0.597743964753209,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,0,1.93866549219044,0.0927680981618513,0,0,0.174919999992391,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.884634079449797,0.886642856860642,0,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0.61214552326098,0.189559738885464,0,0,0,0,0,0,0,0,0,6.07552863969141,0,0.52418000472609,0,0,0.0730893170861856,0,0,0,0,0,0,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.91124334987037,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.665574309221114,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495743057036009,0,0,0,0,0,0,0.449604575675217,0,1.27707087245721,0.82046545696302,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.945526184657525,0,1.03343398250592,0.887821342714695,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.197318320688547,0,0,0.078493092850514,0.628462359664008,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0,0.109940516745429,0.150962843566674,0,0,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.271965960763659,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:24208460..24208464,- | |||
}} |
Revision as of 00:30, 22 January 2014
Short description: | p@chr4:24208460..24208464, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:24208460..24208464, - |
Coexpression cluster: | C449_epidermoid_anaplastic_occipital_oral_middle_Wilms_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 1.84e-34 | 1 |
external female genitalia | 1.84e-34 | 1 |
neocortex | 8.28e-15 | 20 |
regional part of cerebral cortex | 1.36e-13 | 22 |
cerebral cortex | 4.09e-12 | 25 |
pallium | 4.09e-12 | 25 |
regional part of telencephalon | 1.05e-09 | 32 |
cerebral hemisphere | 1.05e-09 | 32 |
brain grey matter | 3.43e-09 | 34 |
gray matter | 3.43e-09 | 34 |
telencephalon | 3.43e-09 | 34 |
brain | 4.40e-08 | 68 |
future brain | 4.40e-08 | 68 |
occipital lobe | 6.55e-08 | 5 |
parietal lobe | 7.49e-08 | 5 |
regional part of forebrain | 8.93e-08 | 41 |
forebrain | 8.93e-08 | 41 |
anterior neural tube | 8.93e-08 | 41 |
future forebrain | 8.93e-08 | 41 |
central nervous system | 6.85e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.64e-10 | 14 |