FFCP PHASE1:Hg19::chr4:86954525..86954527,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:86954525..86954527,+ | |||
|id=chr4:86954525..86954527,+ | |||
|ontology_enrichment_celltype=CL:0002603!2.21e-43!3;CL:0000515!1.64e-32!4;CL:0002589!6.99e-29!2;CL:0000128!4.93e-19!7;CL:0000126!4.93e-19!7;CL:0000127!4.93e-19!7;CL:0002453!4.93e-19!7;CL:0002242!7.46e-16!1;CL:0000228!7.46e-16!1;CL:0002372!7.46e-16!1;CL:0000680!1.18e-11!57;CL:0000056!1.18e-11!57;CL:0000355!1.18e-11!57;CL:0000055!5.89e-10!180;CL:0002588!2.87e-08!2;CL:0000243!3.46e-08!15;CL:0000125!3.46e-08!15;CL:0000030!3.46e-08!15;CL:0000339!3.46e-08!15;CL:0000095!2.22e-07!17;CL:0000123!2.22e-07!17;CL:0000359!2.60e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000228;2.39e-66;1!CL:0002372;2.39e-66;1!CL:0000346;3.27e-23;3!CL:1000428;3.27e-23;3!CL:0002603;3.27e-23;3!CL:0000056;8.69e-18;4!CL:0000737;8.69e-18;4!CL:0002559;1.60e-14;5!CL:0000680;8.99e-11;7!CL:0000128;8.99e-11;7!CL:0000126;8.99e-11;7!CL:0000127;8.99e-11;7!CL:0000188;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,4.66e-66,1;CL:0002372,4.66e-66,1;CL:0002603,2.62e-23,3;CL:0000346,3.27e-23,3;CL:1000428,3.27e-23,3;CL:0000737,1.03e-17,4;CL:0000515,1.03e-17,4;CL:0002559,1.60e-14,5;CL:0000128,8.16e-11,7;CL:0000126,8.16e-11,7;CL:0000127,8.16e-11,7;CL:0002453,8.16e-11,7;CL:0000188,1.21e-08,9;CL:0000333,2.86e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000515;8.69e-18;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001529!6.99e-29!2;UBERON:0007204!6.99e-29!2;UBERON:0002037!4.36e-22!6;UBERON:0006215!4.36e-22!6;UBERON:0002680!5.94e-15!9;UBERON:0001895!5.94e-15!9;UBERON:0010092!5.94e-15!9;UBERON:0004290!2.89e-12!70;UBERON:0004733!2.28e-11!12;UBERON:0002028!2.28e-11!12;UBERON:0007277!2.28e-11!12;UBERON:0001134!7.38e-11!61;UBERON:0002036!7.38e-11!61;UBERON:0003082!7.38e-11!61;UBERON:0004732!1.54e-10!13;UBERON:0002385!1.69e-10!63;UBERON:0001015!1.69e-10!63;UBERON:0000383!1.69e-10!63;UBERON:0000486!2.30e-10!82;UBERON:0000914!3.12e-10!83;UBERON:0002329!3.12e-10!83;UBERON:0003077!3.12e-10!83;UBERON:0003059!3.12e-10!83;UBERON:0007282!3.12e-10!83;UBERON:0009618!3.12e-10!83;UBERON:0007285!3.12e-10!83;UBERON:0003076!3.30e-09!15;UBERON:0003057!3.30e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;3.27e-23;3!UBERON:0001992;3.27e-23;3!UBERON:0002073;1.60e-14;5!UBERON:0002037;2.45e-12;6!UBERON:0002680;1.12e-08;9!UBERON:0002067;1.12e-08;9!UBERON:0001895;1.12e-08;9!UBERON:0004733;7.92e-07;12!UBERON:0002028;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,3.27e-23,3;UBERON:0001992,3.27e-23,3;UBERON:0002073,1.60e-14,5;UBERON:0005086,1.60e-14,5;UBERON:0002037,2.19e-12,6;UBERON:0006215,2.19e-12,6;UBERON:0002680,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0002067,1.12e-08,9;UBERON:0004016,1.12e-08,9;UBERON:0010083,1.12e-08,9;UBERON:0004733,7.48e-07,12;UBERON:0002028,7.48e-07,12;UBERON:0007277,7.48e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96993692922861,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:86954525..86954527,+ | |||
}} |
Revision as of 02:04, 22 January 2014
Short description: | p@chr4:86954525..86954527, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:86954525..86954527, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 4.66e-66 | 1 |
myotube | 4.66e-66 | 1 |
astrocyte of the cerebellum | 2.62e-23 | 3 |
hair follicle dermal papilla cell | 3.27e-23 | 3 |
stem cell of epidermis | 3.27e-23 | 3 |
striated muscle cell | 1.03e-17 | 4 |
skeletal muscle myoblast | 1.03e-17 | 4 |
hair follicle cell | 1.60e-14 | 5 |
oligodendrocyte | 8.16e-11 | 7 |
macroglial cell | 8.16e-11 | 7 |
astrocyte | 8.16e-11 | 7 |
oligodendrocyte precursor cell | 8.16e-11 | 7 |
cell of skeletal muscle | 1.21e-08 | 9 |
migratory neural crest cell | 2.86e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 3.27e-23 | 3 |
papillary layer of dermis | 3.27e-23 | 3 |
hair follicle | 1.60e-14 | 5 |
hair follicle placode | 1.60e-14 | 5 |
cerebellum | 2.19e-12 | 6 |
rhombic lip | 2.19e-12 | 6 |
regional part of metencephalon | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
dermis | 1.12e-08 | 9 |
dermatome | 1.12e-08 | 9 |
future dermis | 1.12e-08 | 9 |
segmental subdivision of hindbrain | 7.48e-07 | 12 |
hindbrain | 7.48e-07 | 12 |
presumptive hindbrain | 7.48e-07 | 12 |