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FFCP PHASE1:Hg19::chr4:108746081..108746096,+: Difference between revisions

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7502649,2.66128285236811,2.11648498388534,0.960546112899439,0,4.7607357116491,4.69281884806909,2.2003459952916,2.03448089157869,5.3260541934841,0.402547587182052,0|short_description=p3@SGMS2}}
{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=166929
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=28395
|TSSclassifier=strong
|UniProt=
|association_with_transcript=43bp_to_ENST00000515332_5end
|coexpression_cluster_id=C2769
|description=CAGE_peak_3_at_SGMS2_5end
|id=chr4:108746081..108746096,+
|ontology_enrichment_celltype=CL:0002057!7.95e-21!42;CL:0000860!4.74e-19!45;CL:0000766!7.01e-14!76;CL:0000557!1.09e-13!71;CL:0002009!1.88e-13!65;CL:0002194!1.84e-12!63;CL:0000576!1.84e-12!63;CL:0000040!1.84e-12!63;CL:0000559!1.84e-12!63;CL:0000839!3.99e-11!70
|ontology_enrichment_celltype_v019=CL:0000860;2.97e-22;33!CL:0002057;2.97e-22;33!CL:0000473;2.94e-18;39!CL:0000234;2.94e-18;39!CL:0000576;3.38e-11;48!CL:0000766;9.67e-09;69
|ontology_enrichment_celltype_v019_2=CL:0000860,1.05e-21,42;CL:0002057,1.05e-21,42;CL:0000473,3.43e-21,48;CL:0000234,3.43e-21,48;CL:0000766,7.39e-15,72;CL:0000557,1.12e-14,67;CL:0002009,1.42e-14,61;CL:0002194,1.74e-13,59;CL:0000576,1.74e-13,59;CL:0000040,1.74e-13,59;CL:0000559,1.74e-13,59;CL:0000839,3.71e-12,66
|ontology_enrichment_development_v019=CL:0002057;1.78e-16;42
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!1.00e-20!448;UBERON:0004120!1.00e-20!448;UBERON:0006603!1.00e-20!448;UBERON:0000480!5.57e-17!626;UBERON:0000467!7.26e-17!625;UBERON:0000468!6.92e-16!659;UBERON:0002204!8.85e-15!167;UBERON:0000062!4.68e-14!511;UBERON:0002050!6.17e-14!605;UBERON:0005423!6.17e-14!605;UBERON:0000923!8.52e-14!604;UBERON:0005291!8.52e-14!604;UBERON:0006598!8.52e-14!604;UBERON:0002532!8.52e-14!604;UBERON:0004765!1.64e-13!101;UBERON:0001434!1.64e-13!101;UBERON:0000922!9.14e-13!612;UBERON:0002371!2.36e-12!80;UBERON:0001474!2.62e-12!86;UBERON:0003081!4.04e-10!216;UBERON:0002390!1.64e-07!102;UBERON:0003061!1.64e-07!102;UBERON:0005631!3.01e-07!14;UBERON:0000158!3.01e-07!14
|ontology_enrichment_uberon_v019=UBERON:0005631;9.78e-07;10!UBERON:0000158;9.78e-07;10
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.81e-15,167;UBERON:0001434,3.34e-14,100;UBERON:0004765,1.24e-13,90;UBERON:0001474,2.01e-13,82;UBERON:0002371,2.36e-13,76;UBERON:0000926,2.37e-13,315;UBERON:0004120,2.37e-13,315;UBERON:0006603,2.37e-13,315;UBERON:0003081,8.05e-10,203;UBERON:0005423,2.88e-09,581;UBERON:0002050,4.63e-09,564;UBERON:0002405,1.44e-08,93;UBERON:0000923,2.69e-08,560;UBERON:0010316,2.69e-08,560;UBERON:0005291,2.69e-08,560;UBERON:0006598,2.69e-08,560;UBERON:0010317,2.69e-08,560;UBERON:0002532,2.69e-08,560;UBERON:0000922,3.21e-08,592;UBERON:0005631,1.09e-07,14;UBERON:0000158,1.09e-07,14;UBERON:0002390,1.13e-07,98;UBERON:0003061,1.13e-07,98;UBERON:0004923,2.28e-07,66
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|short_description=p3@SGMS2
}}

Revision as of 02:39, 22 January 2014

Short description:p3@SGMS2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_SGMS2_5end
Coexpression cluster:C2769_CD14_amniotic_chorionic_immature_Mast_Smooth_granulosa
Association with transcript: 43bp_to_ENST00000515332_5end
EntrezGene:SGMS2
HGNC: 28395
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data