FFCP PHASE1:Hg19::chr4:129209221..129209251,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10424 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16089 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=106bp_to_ENST00000512483_5end | |||
|description=CAGE_peak_4_at_PGRMC2_5end | |||
|id=chr4:129209221..129209251,- | |||
|ontology_enrichment_celltype=CL:0000055!6.45e-21!180;CL:0000057!7.96e-14!75;CL:0000192!2.64e-08!42;CL:0000514!2.64e-08!42;CL:0000012!3.53e-07!682;CL:0000548!3.63e-07!679;CL:0000004!3.63e-07!679;CL:0000255!3.63e-07!679;CL:0000136!8.15e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.18e-07;13!CL:0000057;6.34e-07;73!CL:0002620;7.66e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.08e-18,76;CL:0000192,4.57e-09,43;CL:0000514,4.57e-09,43;CL:0000136,1.80e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.57e-10!365;UBERON:0005256!3.94e-08!143;UBERON:0000477!1.22e-07!286;UBERON:0000914!6.12e-07!83;UBERON:0002329!6.12e-07!83;UBERON:0003077!6.12e-07!83;UBERON:0003059!6.12e-07!83;UBERON:0007282!6.12e-07!83;UBERON:0009618!6.12e-07!83;UBERON:0007285!6.12e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.02e-09;9!UBERON:0001557;2.02e-09;9!UBERON:0003688;4.66e-08;6!UBERON:0002358;4.66e-08;6!UBERON:0003684;4.66e-08;6!UBERON:0001178;4.66e-08;6!UBERON:0005631;9.76e-07;10!UBERON:0000158;9.76e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.05e-09,9;UBERON:0004923,2.07e-09,66;UBERON:0005631,5.32e-09,14;UBERON:0000158,5.32e-09,14;UBERON:0003688,7.43e-08,6;UBERON:0002358,7.43e-08,6;UBERON:0003684,7.43e-08,6;UBERON:0001178,7.43e-08,6;UBERON:0004871,1.81e-07,8;UBERON:0000305,7.45e-07,7 | |||
|phase1_expression=1.99846217197612,2.99740733447376,4.36958652697511,3.00219895059391,6.25745532198203,7.85104671690332,12.6649939084155,1.89515962028049,1.82829939739887,1.22866968250754,0,1.96597234917155,2.11013582582763,1.23766352960047,0.331397375727916,2.01697543935533,1.20538905604795,0,0,1.23121058076788,0.816002764977012,2.19418305034661,0.572471974262113,0.136874425072884,0.125542639594803,0.0764134057479513,0.328402357799783,0.0787107813136792,0.393364276848904,0,0,0.919421224478927,0,0,0,0.142169232487422,0.293600439334847,0,0,0,0.447830948479849,0,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0.822405995998037,0,0.651844533267181,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,1.2786256184353,1.80719576192283,2.50668955317945,1.44846518960824,0.795285947051099,0,0.661743720148475,1.55210578223795,0.614843499851882,0.0654895377488563,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0,0,0.33472061276467,0,1.52054421143703,0.488124115096339,0,2.43042584364528,0.267899184852239,0,0,1.53316637465883,0,0.183201743930407,0,0,0,1.98788780678127,3.16576279161449,3.44263870114369,6.02356903572509,1.06400514659507,2.80338800071154,1.06748995729705,1.48000529050296,0.311211035399766,0.538842688278752,0.490385709340376,1.05950199351452,2.30470369792,3.51482147750695,1.5608003841516,1.1409436430889,0.747243402759005,0.23486899728753,0.485618833104395,0.280901613404497,0.816616685019573,0.368502951935304,1.23990937410919,4.75201142912821,2.96720315134268,5.46096817162816,4.31170885089743,0.168336113954066,0.250237039743928,0.277064115484183,1.31693286264251,2.75839016219118,3.45547535485173,1.13432183160021,2.33206526395521,1.49490172172997,3.39091041855299,1.20036438433761,2.37020817248409,1.28820270022815,1.8611685633159,0.506328996723799,1.16924406193438,0.252433774244115,3.58994604704967,1.13152239773168,1.77504796258307,1.0075209822764,1.52604533079439,0.386521706326594,0,0,1.09776335516636,0.662648841607426,0,0.310983165046111,0.504641701751257,1.09493207722749,0,1.92972281457866,0,1.85747171212792,5.0531563716871,2.72105640091641,4.72037132218685,3.85617647813571,3.19852520923942,4.79334777003293,2.60997681022206,1.21348177344148,1.96221465125346,2.69323009862473,0,1.40241773803446,0.4115740113314,2.94017422771084,0,0.982827216677626,2.36315962672562,0,0,1.02940686179115,0.658501712451753,0,0.301586917234893,0.370353780634118,1.62904152655162,1.03993478527958,0,0.231860809950154,1.40890433082986,1.01056513432752,0.462985512576611,0.380508304469197,0.790204397959275,0.858486162094873,0.246217006087397,0.234004265139238,0,0.93733833986777,2.18376766658517,0.141775097242386,0.268675568108545,0,0,0,0,0.207328115540772,0.144119953416961,0.37872730027914,0.63497894292169,0.763976851116555,1.17217447210047,1.71072446022705,0.616964956219941,0,3.42991719156694,0.336393253036082,0.87192013766656,0.1466765716419,0.129271715757778,0,0,2.92531928243358,2.08014873822732,0.257207374262142,0,0.799266537048298,8.57867961948885,3.25572963234866,0,0.65147236858747,9.24019066730619,0.791951872933429,0.602878754119172,3.48613383440118,0.399891964728228,0,0.502257091432126,0,0.479249710983165,1.14861935834114,0,1.73737568001095,0.410952645100767,0.179060963239896,0,0,0.215627574859517,0.128343036279748,0,0,1.54657762555539,0.502548796003046,0.637938751653163,0.749007023947182,0,0,0.49076596687656,0.500170521059677,0,2.70362119990049,4.81758269752337,7.09660867652706,3.74852527976682,2.10662269809403,6.82222512167955,0,0.664225598535437,0.368738337083406,1.12948698808508,1.95801157462741,0,0,0.647142602455851,0.106727557803444,0.909382714338778,8.32177197552485,3.32629322662648,3.2254015016441,1.68808170616869,2.52594084989766,6.53509661204075,2.04682899626681,5.95159508231348,0,0.308419387605311,0.355123450626254,0.328508624055237,0,0.232420756919918,0.241718899183244,0.802025881213139,0.644566922551274,1.14814448164607,1.82091168006717,1.18011973463482,1.80479845162965,1.38627606787947,0,0,1.79437769117889,1.13733384070897,0,0.431831832204279,0,1.35473218771926,0.501689773854853,0.509752546090077,0.831076008928724,0.671624264166535,2.85037839639715,4.70583811844821,0,2.95213181129735,1.62689197332152,1.13345112812495,0.27470839445503,0.247528499761764,0.574265537996172,0,1.6068392984416,0,0.462145851343933,0.460511024178389,0.551346289938122,0.537101224341368,0.290033387828457,0.170453254832202,0.356128142586949,0.495854746082934,0.576570202095319,0.382838137483752,0.6069466851333,1.39453664789186,8.49993336442728,0.6970372701606,0.924100740528266,1.59691809095107,2.60979897622522,1.29726953372744,1.14499909393593,1.48863347743867,2.21465597303108,3.8126038784765,0.767693373934002,1.28381696410176,0.636406495851874,0,1.2591072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| |||
|short_description=p4@PGRMC2 | |||
}} |
Revision as of 03:04, 22 January 2014
Short description: | p4@PGRMC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PGRMC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 106bp_to_ENST00000512483_5end |
EntrezGene: | PGRMC2 |
HGNC: | 16089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.08e-18 | 76 |
smooth muscle cell | 4.57e-09 | 43 |
smooth muscle myoblast | 4.57e-09 | 43 |
fat cell | 1.80e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.05e-09 | 9 |
organ component layer | 2.07e-09 | 66 |
extraembryonic membrane | 5.32e-09 | 14 |
membranous layer | 5.32e-09 | 14 |
omentum | 7.43e-08 | 6 |
peritoneum | 7.43e-08 | 6 |
abdominal cavity | 7.43e-08 | 6 |
visceral peritoneum | 7.43e-08 | 6 |
somatic layer of lateral plate mesoderm | 1.81e-07 | 8 |
amnion | 7.45e-07 | 7 |