FFCP PHASE1:Hg19::chr4:165898744..165898754,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=391712 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24339 | |||
|TSSclassifier=strong | |||
|UniProt=Q5EBN2 | |||
|association_with_transcript=63bp_to_NM_001012414,uc003iqw.2_5end | |||
|description=CAGE_peak_4_at_TRIM61_5end | |||
|id=chr4:165898744..165898754,- | |||
|ontology_enrichment_celltype=CL:0000057!3.96e-08!75;CL:0000055!4.96e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002581;3.34e-66;1!CL:0000039;1.64e-38;7!CL:0000586;1.64e-38;7!CL:0002334;8.14e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,2.39e-66,1;CL:0000039,1.80e-38,7;CL:0000586,1.80e-38,7;CL:0002334,7.92e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.22e-27;10!UBERON:0005564;2.22e-27;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;3.89e-13;22!DOID:2994;3.89e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.01e-13,22;DOID:2994,4.01e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.60e-08!8;UBERON:0003135!2.45e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;5.96e-34;2!UBERON:0000473;7.07e-34;8!UBERON:0003135;5.16e-25;11!UBERON:0000991;1.05e-13;21!UBERON:0003101;3.89e-13;22!UBERON:0000079;3.89e-13;22!UBERON:0003133;9.78e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,5.04e-34,2;UBERON:0000473,7.68e-34,8;UBERON:0003135,5.49e-25,11;UBERON:0000991,1.09e-13,21;UBERON:0009196,1.09e-13,21;UBERON:0009117,1.09e-13,21;UBERON:0005564,1.09e-13,21;UBERON:0004176,4.01e-13,22;UBERON:0003101,4.01e-13,22;UBERON:0000079,4.01e-13,22;UBERON:0002323,7.52e-07,46 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0.454072282934794,0.576175924479999,0.234321431833797,0,0,0,0,0.485618833104395,0.140450806702248,0,0,0,0,0,0,0,0,0.375355559615893,0,0,0,0,0.113432183160021,0.358779271377724,0,0,0,0.103052529238439,0,0.18611685633159,0.337552664482532,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.64341568457443,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.413509717453592,0.107420244868274,0,0.170453254832202,0.0890320356467374,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.392996164052485,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.246169610922139,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0.685209623233754,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.338693328263138,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0.159296767163702,0,0.465788870628778,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0.343395705182793,0,0,0,0.428883182749851,0,0,0,0.244736704506468,0.358177682162975,0,0,0.530067437837643,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0.109265571963696,0.253397002022874,1.42784361638774,0.801652215796681,2.48116228744081,0.50141507858475,0.454672189309436,0.267964130156178,0,0,0,0,0,0.0620747142958579,0.224263725161227,0.12729431655633,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p4@TRIM61 | |||
}} |
Revision as of 03:49, 22 January 2014
Short description: | p4@TRIM61 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIM61_5end |
Coexpression cluster: | NA |
Association with transcript: | 63bp_to_NM_001012414, uc003iqw.2_5end |
EntrezGene: | TRIM61 |
HGNC: | 24339 |
UniProt: | Q5EBN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 2.39e-66 | 1 |
germ line cell | 1.80e-38 | 7 |
germ cell | 1.80e-38 | 7 |
preadipocyte | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 5.04e-34 | 2 |
testis | 7.68e-34 | 8 |
male reproductive organ | 5.49e-25 | 11 |
gonad | 1.09e-13 | 21 |
indifferent external genitalia | 1.09e-13 | 21 |
indifferent gonad | 1.09e-13 | 21 |
gonad primordium | 1.09e-13 | 21 |
external genitalia | 4.01e-13 | 22 |
male organism | 4.01e-13 | 22 |
male reproductive system | 4.01e-13 | 22 |
body cavity | 7.52e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.01e-13 | 22 |
germ cell cancer | 4.01e-13 | 22 |