FFCP PHASE1:Hg19::chr5:21778572..21778576,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:21778572..21778576,- | |||
|id=chr5:21778572..21778576,- | |||
|ontology_enrichment_celltype=CL:0002274!1.22e-08!5;CL:0000457!1.22e-08!5;CL:0002191!1.22e-08!5;CL:0000097!1.22e-08!5;CL:0000831!1.22e-08!5;CL:0002028!1.22e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002535;2.74e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.59e-12,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;2.74e-12;2!DOID:4236;2.74e-12;2!DOID:3119;2.40e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:154,2.90e-12,2;DOID:4236,2.90e-12,2;DOID:3119,2.36e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.02e-24!57;UBERON:0005068!8.02e-24!57;UBERON:0006241!8.02e-24!57;UBERON:0007135!8.02e-24!57;UBERON:0001893!2.28e-23!34;UBERON:0001869!1.09e-22!32;UBERON:0002346!1.41e-22!90;UBERON:0002791!1.27e-21!33;UBERON:0002020!6.63e-21!34;UBERON:0003528!6.63e-21!34;UBERON:0001950!2.42e-20!20;UBERON:0002616!5.54e-19!59;UBERON:0005743!1.00e-18!86;UBERON:0002780!1.49e-18!41;UBERON:0001890!1.49e-18!41;UBERON:0006240!1.49e-18!41;UBERON:0001017!1.84e-18!82;UBERON:0002619!2.95e-18!22;UBERON:0003080!5.40e-18!42;UBERON:0000073!1.30e-17!94;UBERON:0001016!1.30e-17!94;UBERON:0003075!1.62e-17!86;UBERON:0007284!1.62e-17!86;UBERON:0000955!1.77e-16!69;UBERON:0006238!1.77e-16!69;UBERON:0000956!9.78e-16!25;UBERON:0000203!9.78e-16!25;UBERON:0000200!4.32e-15!6;UBERON:0007023!2.19e-13!115;UBERON:0000924!4.90e-13!173;UBERON:0006601!4.90e-13!173;UBERON:0003056!3.16e-12!61;UBERON:0000033!1.17e-10!123;UBERON:0004121!5.51e-10!169;UBERON:0000153!8.05e-10!129;UBERON:0007811!8.05e-10!129;UBERON:0002771!1.85e-08!3;UBERON:0001872!5.23e-08!5;UBERON:0003076!4.90e-07!15;UBERON:0003057!4.90e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002702;1.91e-44;2!UBERON:0001870;4.83e-30;3!UBERON:0000200;1.41e-15;6!UBERON:0006955;2.74e-12;2!UBERON:0004801;2.74e-12;2!UBERON:0001950;4.65e-10;20!UBERON:0002619;3.07e-09;22!UBERON:0000956;3.04e-08;25!UBERON:0000203;3.04e-08;25!UBERON:0002346;7.07e-07;4!UBERON:0000923;7.07e-07;4!UBERON:0010316;7.07e-07;4!UBERON:0005291;7.07e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,2.39e-44,2;UBERON:0001870,5.61e-30,3;UBERON:0000200,1.52e-15,6;UBERON:0006955,2.59e-12,2;UBERON:0004801,2.59e-12,2;UBERON:0001950,5.03e-10,20;UBERON:0002619,3.30e-09,22;UBERON:0000956,3.24e-08,25;UBERON:0000203,3.24e-08,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0.621984346622316,0.720599767084807,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,1.51159648712566,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,2.33283690706603,1.38899995946634,0,0.844175070377856,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0.586654148204409,0.801588202515337,0,0,0,0,4.11827994868715,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,1.77213635993397,0.122026264901963,1.1267183763585,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.691292180758654,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509197589862076,0.850299680406731,2.23084375666204,0.558644917973244,0,0,0,0,0,0.192687675289379,0,1.27707087245721,0.41023272848151,0.252071696221718,0,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.413373593002368,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0.475788130837822,0.131545547125698,0,0.111231401892069,0,0.471346769748006,0,0,0.215927591218621,0,0.357382720883282,0,1.97610423125813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:21778572..21778576,- | |||
}} |
Revision as of 04:51, 22 January 2014
Short description: | p@chr5:21778572..21778576, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:21778572..21778576, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.59e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 2.39e-44 | 2 |
frontal cortex | 5.61e-30 | 3 |
gyrus | 1.52e-15 | 6 |
uterine epithelium | 2.59e-12 | 2 |
cervix epithelium | 2.59e-12 | 2 |
neocortex | 5.03e-10 | 20 |
regional part of cerebral cortex | 3.30e-09 | 22 |
cerebral cortex | 3.24e-08 | 25 |
pallium | 3.24e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 2.90e-12 | 2 |
carcinosarcoma | 2.90e-12 | 2 |
gastrointestinal system cancer | 2.36e-07 | 14 |