FFCP PHASE1:Hg19::chr5:78281623..78281638,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=714 | |||
|TSSclassifier=strong | |||
|UniProt=P15848 | |||
|association_with_transcript=-15bp_to_ENST00000264914_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_6_at_ARSB_5end | |||
|id=chr5:78281623..78281638,- | |||
|ontology_enrichment_celltype=CL:0002334!1.23e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.76e-21;12!CL:0002580;4.07e-17;3!CL:0002579;5.63e-17;3!CL:0000182;5.16e-16;12!CL:0002617;7.01e-12;2!CL:0002593;1.11e-11;2!CL:0000136;2.81e-10;13!CL:0002615;4.55e-08;3!CL:0002616;5.42e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.83e-21,12;CL:0002580,2.87e-17,3;CL:0002579,4.44e-17,3;CL:0000182,3.73e-16,12;CL:0002617,4.43e-12,2;CL:0002593,1.38e-11,2;CL:0000136,5.63e-09,15;CL:0002615,3.68e-08,3;CL:0002616,5.43e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.81e-23;11!UBERON:0009497;1.01e-19;13!UBERON:0001041;2.37e-10;30!UBERON:0003104;1.30e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!2.80e-09!12;UBERON:0000042!2.80e-09!12;UBERON:0003688!1.56e-08!6;UBERON:0002358!1.56e-08!6;UBERON:0003684!1.56e-08!6;UBERON:0001178!1.56e-08!6;UBERON:0002417!1.57e-07!61;UBERON:0000916!1.57e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.23e-22;6!UBERON:0002358;2.23e-22;6!UBERON:0003684;2.23e-22;6!UBERON:0001178;2.23e-22;6!UBERON:0004457;3.65e-21;9!UBERON:0000042;3.65e-21;9!UBERON:0002107;4.63e-17;19!UBERON:0006925;4.63e-17;19!UBERON:0000310;1.64e-13;10!UBERON:0002423;1.14e-12;25!UBERON:0001443;2.93e-12;11!UBERON:0005406;7.82e-12;2!UBERON:0002456;1.11e-11;2!UBERON:0002365;1.25e-09;31!UBERON:0002330;1.25e-09;31!UBERON:0002368;3.73e-08;33!UBERON:0002417;1.02e-07;58!UBERON:0000916;1.02e-07;58!UBERON:0009569;1.04e-07;110 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.41e-22,6;UBERON:0002358,1.41e-22,6;UBERON:0003684,1.41e-22,6;UBERON:0001178,1.41e-22,6;UBERON:0004457,2.73e-21,12;UBERON:0000042,2.73e-21,12;UBERON:0009569,2.00e-18,112;UBERON:0002107,4.71e-17,19;UBERON:0006925,4.71e-17,19;UBERON:0008836,4.71e-17,19;UBERON:0007499,7.10e-16,25;UBERON:0009856,3.32e-15,26;UBERON:0002417,1.20e-14,60;UBERON:0000916,1.20e-14,60;UBERON:0008835,1.47e-14,22;UBERON:0003894,1.47e-14,22;UBERON:0009854,7.14e-14,23;UBERON:0000310,1.11e-13,10;UBERON:0009497,1.16e-12,25;UBERON:0000015,1.16e-12,25;UBERON:0002423,1.16e-12,25;UBERON:0006235,1.16e-12,25;UBERON:0004161,1.16e-12,25;UBERON:0001443,2.06e-12,11;UBERON:0005406,6.85e-12,2;UBERON:0002456,1.38e-11,2;UBERON:0002100,2.23e-11,199;UBERON:0002365,5.67e-10,31;UBERON:0002330,5.67e-10,31;UBERON:0002368,1.08e-08,35;UBERON:0003929,4.41e-08,54 | |||
|phase1_expression=6.54042165374004,1.71280419112787,1.69145284915165,2.00146596706261,0.893922188854576,5.23403114460221,0,0,0,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0,0,0.369363174230364,0.204000691244253,0,0,0,0,0.0764134057479513,0.492603536699674,0.472264687882075,0,0,0,0,0,0,0.46480320348181,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,1.00267582127178,0.869079113764942,0,0,0.189069634328136,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,1.13967460498122,0.662045904066094,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0.18611685633159,0.843881661206331,0.68205903612839,0,0,0,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,1.01346914667305,0.61642896765115,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,5.21026396419431,5.98501695823444,1.68396056659844,3.33161788064823,3.07024349440022,1.60853921143608,1.48418066444991,0.154209693802656,0,0.0821271560138091,0.519254429183621,0.116210378459959,1.20859449591622,0.200506470303285,0,0.229628896329213,0,0,0,0.231046011313244,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,1.44257416306811,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.94443704049192,0,0,0.532306030317022,0,0.37064843820784,0.572499546967965,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0,0.404364963146632,0,0,0.48763373908959,1.21856744815642,2.11300293513511,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0,0,0,0,0,2.11107635297664,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0,0.324621940274555,0,0,0.156679895773023,0,0,0.642352300414798,0.403599414382095,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0.994147647766298,0,0,0.16480387422676,0,0,0,0.251932747854276,0.306806047506464,0.246169610922139,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.569710279235006,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.141353071433941,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0.343972064943233,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0.144090417154106,0,3.08870996151536,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,2.32991899054908,20.5624105821854,19.1204791444306,20.5580808755264,1.47641222272123,0.0846733320657845,0,0,0,0.137539436597234,0,1.799791132412,0.77380195455795,0.0607495566580247,0,0.551639951094387,0.419636705079985,0,0.179287339332845,0,0,0,0,1.08599920350743,0.864221491201268,0,0,0,0.170388021785422,0,1.02586563574658,1.32506888912221,0,0,0.171086837884329,0,0,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0,0.303298235083296,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0.147855149989634,0.318593534327405,0.449803112163605,0.465788870628778,1.65882483136342,0,0,0,0.761610424337591,0,0.181848659202559,0.214821114084977,0,0,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0.163565394255844,0.327609848846413,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0.335566295393377,0.294450700845729,0,0,0,0,0,0.467878926924211,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,1.35941691750254,0.187967835959707,0.128915775947154,1.49911733887393,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0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| |||
|short_description=p6@ARSB | |||
}} |
Revision as of 06:08, 22 January 2014
Short description: | p6@ARSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARSB_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -15bp_to_ENST00000264914_5end |
EntrezGene: | ARSB |
HGNC: | 714 |
UniProt: | P15848 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.83e-21 | 12 |
preadipocyte of the breast | 2.87e-17 | 3 |
omentum preadipocyte | 4.44e-17 | 3 |
hepatocyte | 3.73e-16 | 12 |
adipocyte of breast | 4.43e-12 | 2 |
smooth muscle cell of the internal thoracic artery | 1.38e-11 | 2 |
fat cell | 5.63e-09 | 15 |
adipocyte of omentum tissue | 3.68e-08 | 3 |
perirenal adipocyte cell | 5.43e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.41e-22 | 6 |
peritoneum | 1.41e-22 | 6 |
abdominal cavity | 1.41e-22 | 6 |
visceral peritoneum | 1.41e-22 | 6 |
cavity lining | 2.73e-21 | 12 |
serous membrane | 2.73e-21 | 12 |
subdivision of trunk | 2.00e-18 | 112 |
liver | 4.71e-17 | 19 |
digestive gland | 4.71e-17 | 19 |
liver bud | 4.71e-17 | 19 |
epithelial sac | 7.10e-16 | 25 |
sac | 3.32e-15 | 26 |
abdominal segment of trunk | 1.20e-14 | 60 |
abdomen | 1.20e-14 | 60 |
hepatic diverticulum | 1.47e-14 | 22 |
liver primordium | 1.47e-14 | 22 |
digestive tract diverticulum | 7.14e-14 | 23 |
breast | 1.11e-13 | 10 |
epithelium of foregut-midgut junction | 1.16e-12 | 25 |
anatomical boundary | 1.16e-12 | 25 |
hepatobiliary system | 1.16e-12 | 25 |
foregut-midgut junction | 1.16e-12 | 25 |
septum transversum | 1.16e-12 | 25 |
chest | 2.06e-12 | 11 |
perirenal fat | 6.85e-12 | 2 |
internal thoracic artery | 1.38e-11 | 2 |
trunk | 2.23e-11 | 199 |
exocrine gland | 5.67e-10 | 31 |
exocrine system | 5.67e-10 | 31 |
endocrine gland | 1.08e-08 | 35 |
gut epithelium | 4.41e-08 | 54 |